prot_C-tenellus_contig10071.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10071.1.1
Unique Nameprot_C-tenellus_contig10071.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length82
Homology
BLAST of mRNA_C-tenellus_contig10071.1.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 5.770e-15
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    7 RLLFYADKELNVTTEIKPTFQYMQNRGEFEMSDILAV--------CRVMVDWLGLSEDERTLEPLSSILEDVPVFLCKQLKKLK 82
            RL FYAD ELNVT+++K  FQ+   +GE EM  IL +          V V W G  EDE T +PLS I +D P FL ++L+K+K
Sbjct:   71 RLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMK 154          
BLAST of mRNA_C-tenellus_contig10071.1.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 7.280e-14
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    7 RLLFYADKELNVTTEIKPTFQYMQNRGEFEMSDILAV--------CRVMVDWLGLSEDERTLEPLSSILEDVPVFLCKQLKKLK 82
            RL FYAD ELNVT+++K  FQ+   +GE EM  IL +          V V W G  EDE T +PLS I +D P FL ++L+K+K
Sbjct:  326 RLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMK 409          
BLAST of mRNA_C-tenellus_contig10071.1.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 8.190e-14
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    7 RLLFYADKELNVTTEIKPTFQYMQNRGEFEMSDILAV--------CRVMVDWLGLSEDERTLEPLSSILEDVPVFLCKQLKKLK 82
            RL FYAD ELNVT+++K  FQ+   +GE EM  IL +          V V W G  EDE T +PLS I +D P FL ++L+K+K
Sbjct: 1549 RLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMK 1632          
BLAST of mRNA_C-tenellus_contig10071.1.1 vs. uniprot
Match: A0A3R6WKY8_9STRA (Chromo domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WKY8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.370e-8
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    7 RLLFYADKELNVTTEIKPTFQYMQNRGEFEMSDILAVCR----VMVDWLGLSEDERTLEPLSSILEDVPVFL 74
            RL FY DK+LNVT  I    +Y +          +   R    VMV WLGLS+DE T EPLS++LEDVP+ L
Sbjct:   34 RLRFYHDKDLNVTEGILSFARYNEGGHMVRAFGGVRPARDSFEVMVYWLGLSDDEATWEPLSTLLEDVPILL 105          
BLAST of mRNA_C-tenellus_contig10071.1.1 vs. uniprot
Match: A0A2P4Y8M4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y8M4_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.090e-5
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0
Query:    5 LKRLLFYADKELNVTTEIKPTFQYMQNRG---------EFEMSDILAVCRVMVDWLGLSEDERTLEPLSSILEDVPV 72
            L RL FYAD  LN T EI    + + ++G         E   +     C ++V WLGL   E   EPLS++L+DVPV
Sbjct: 1203 LLRLKFYADAALNTTEEI---MELVSSQGMLLGVDKFIEHRYNQDFGGCELLVSWLGLQTIENAWEPLSTLLQDVPV 1276          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10071.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KAI3_9PHAE5.770e-1546.43Chromo domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JVS6_9PHAE7.280e-1446.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE8.190e-1446.43Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A3R6WKY8_9STRA5.370e-847.22Chromo domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A2P4Y8M4_9STRA2.090e-538.96Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10071contigC-tenellus_contig10071:236..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10071.1.1mRNA_C-tenellus_contig10071.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10071 236..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10071.1.1 ID=prot_C-tenellus_contig10071.1.1|Name=mRNA_C-tenellus_contig10071.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=82bp
MVQWLKRLLFYADKELNVTTEIKPTFQYMQNRGEFEMSDILAVCRVMVDW
LGLSEDERTLEPLSSILEDVPVFLCKQLKKLK
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