prot_C-tenellus_contig10067.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10067.1.1
Unique Nameprot_C-tenellus_contig10067.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length319
Homology
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: D7FLP3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP3_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 3.260e-74
Identity = 132/226 (58.41%), Postives = 173/226 (76.55%), Query Frame = 0
Query:   95 GGYEMEDGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVME-----LNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLKENK 315
            G   ++D LN SQ++AV + VG VRVVAGPGSGKTRVLTRR+AHLVRN+ AP WSILAVTFT KA+ EMR RV K +G+DV+GQ+ LGTFHS+CARL+RR G+ LPA++PGLD +F+IFDT+DSR+L+ +IIKEMG D  +VKP    S +S LKSQG GP D+ +     L +G+  G +   K +  K +AE++  YQ RL +SNA+DFDD++LV LRLL+++K
Sbjct:   78 GASALDDELNESQRDAVFAEVGAVRVVAGPGSGKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTVGEDVSGQVALGTFHSICARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTDIIKEMGQDIKEVKPNMMRSSISKLKSQGLGPQDIAKKSEDMLERGKSTGFVGG-KARHAKMVAEIYTKYQARLIQSNALDFDDIILVALRLLRQDK 302          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A1V2LZP9_9FIRM (DNA helicase n=1 Tax=Epulopiscium sp. SCG-B11WGA-EpuloA1 TaxID=1710701 RepID=A0A1V2LZP9_9FIRM)

HSP 1 Score: 167 bits (423), Expect = 5.200e-47
Identity = 92/216 (42.59%), Postives = 135/216 (62.50%), Query Frame = 0
Query:   99 MEDGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLKEN 314
            M +GLN  Q++AV+   GP+ V+AG GSGKT+VLT R+AHL+ N +  PWSILA+TFTNK+A EM+ R++ ++G+  T  + + TFHS+C R++RR GE L     G ++ FTI+D+ D + LV E++K   ++   +KP   I+ +S  K+Q   PN+ +             E     K LAE++  YQ +L E+NA DFDDLLL T  L + N
Sbjct:    1 MLEGLNEMQKQAVLHTEGPLLVLAGAGSGKTKVLTHRIAHLINNKNVAPWSILAITFTNKSAKEMKERISGLIGEANTRDMWVSTFHSMCVRILRRDGERL-----GFNKYFTIYDSSDQKALVKEVMKSKNINEKTLKPSEVIAYISSNKNQFILPNEAI------------TESNFRTKILAEIYLTYQYKLKENNACDFDDLLLNTCVLFQNN 199          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A3D4JH82_9CHLR (DNA helicase (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A3D4JH82_9CHLR)

HSP 1 Score: 169 bits (428), Expect = 4.310e-46
Identity = 98/214 (45.79%), Postives = 133/214 (62.15%), Query Frame = 0
Query:  101 DGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLKEN 314
            D LNP Q++AV +  GPV VVAGPGSGKTRVLT+R+ +L+ N    PW ILAVTFTNKAA EM  RV  I+ +     + +GTFHS+CAR++RR  EHLP     L+  F IFD+DD + LV  II+EM L+    +     + +S  K+    P+D            I+  + +++K    ++  YQ+RL  SNAVDFDD+L+ T RLL+EN
Sbjct:   18 DKLNPGQRKAVTAQDGPVLVVAGPGSGKTRVLTQRIVYLIANQGIRPWQILAVTFTNKAAKEMGERVKAIINEQAIEGMMIGTFHSICARILRRESEHLP-----LESNFVIFDSDDQQSLVKSIIREMNLNEKLYRASSVHAAISRAKNDLIFPDDY----------PINTYRDEVVK---RVYTEYQKRLIASNAVDFDDILVYTARLLEEN 213          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A402AI73_9CHLR (DNA helicase n=5 Tax=Dictyobacter TaxID=2024965 RepID=A0A402AI73_9CHLR)

HSP 1 Score: 176 bits (446), Expect = 4.990e-46
Identity = 94/209 (44.98%), Postives = 134/209 (64.11%), Query Frame = 0
Query:  102 GLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRL 310
            GLN  QQEAV +  GPV ++AGPGSGKTRV+T R+AHLV+     PW ILAVTFTNKAA EMR R+ K++G +   ++ +GTFH++CAR++R   EHL  L  GL R F I DTDD   L+ + IKE+ LD  + +P    + +S  K+   GP+ + EL             K + +  A +F +YQ+ + ++N+VDFDDL+++T +L
Sbjct:   11 GLNQPQQEAVTTTEGPVLILAGPGSGKTRVITHRIAHLVQQEQVSPWRILAVTFTNKAAREMRERMEKLVGVNEAKEMMIGTFHAICARVLRTEAEHLAPL--GLSRSFVILDTDDQNTLLKQAIKELNLDEKQYRPATIQALISRAKNDMHGPDQMAEL-----------ATKYIEEVAARVFKVYQKMMRKNNSVDFDDLIMLTEQL 206          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A419EHN5_9CHLR (DNA helicase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A419EHN5_9CHLR)

HSP 1 Score: 174 bits (441), Expect = 1.300e-45
Identity = 100/214 (46.73%), Postives = 138/214 (64.49%), Query Frame = 0
Query:  101 DGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLKEN 314
            D LN  Q++AV +  GPV V+AGPGSGKTRVLT+RVA+L+ +    P+ ILAVTFTNKAA EM  RV  +LG++ T  + LGTFHS+CARL+RR  EHLP     ++  F IFD DD  ++V  +IKE  LD  + +P    + +S      K  ND+++ +       I+  + +++K    +F  YQ+RL  SNAVDFDDLL+ T RLL++N
Sbjct:    5 DRLNAPQRKAVTAGTGPVLVLAGPGSGKTRVLTQRVAYLIASEGVRPYQILAVTFTNKAAREMEHRVQSLLGEEATQGMMLGTFHSICARLLRREAEHLP-----VESNFVIFDADDQERIVKSVIKEFNLDDKRFRPASVHASIS------KAKNDLIDAD----NYPITNYRDEVVK---RIFTEYQKRLITSNAVDFDDLLVYTARLLEDN 200          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A2I1V7Z4_9CORY (ATP-dependent DNA helicase n=5 Tax=Corynebacterium TaxID=1716 RepID=A0A2I1V7Z4_9CORY)

HSP 1 Score: 174 bits (442), Expect = 1.410e-45
Identity = 98/213 (46.01%), Postives = 139/213 (65.26%), Query Frame = 0
Query:  102 GLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLKEN 314
            GLNP QQ AVV    P+ +VAG GSGKT VLTRR+AHL++N S  PW ILA+TFTNKAAAEMR RVA ++G +   ++ + TFHSVC R++R+  +    L+PGL+  FTI+D+DDSR+L+  I K+  LD  K  P+   + +S LK++   P D  + N  +              T+A+++  YQRRL +SNA+DFDDL+   +R+ K++
Sbjct:   10 GLNPQQQAAVVHQGSPLLIVAGAGSGKTAVLTRRIAHLLQNRSVTPWQILAITFTNKAAAEMRERVAALVGPEAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIAKDFNLDLKKFTPRTLANAISNLKNELIDP-DTAQANAAQTHNPFET-------TVAQVYVEYQRRLRQSNALDFDDLIGEVVRIFKQH 209          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A139D7Z1_9FIRM (DNA helicase n=3 Tax=Halanaerobium TaxID=2330 RepID=A0A139D7Z1_9FIRM)

HSP 1 Score: 164 bits (415), Expect = 1.710e-45
Identity = 95/216 (43.98%), Postives = 136/216 (62.96%), Query Frame = 0
Query:   98 EMEDGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLKE 313
            E+   LN +Q+EAV    GP  V+AG GSGKTRVLTRR+ +L+ +    P++ILAVTFTNKAA EM+ RV +++G  V   + + TFHS C R++RR  E L     G ++ F IFD+ D RKLV E++K   LD  K+KP+  ++++S  K++ K P  +  L+    G           KT A+++  YQ+RL E+NA+DFDDL+  T+RL KE
Sbjct:    5 EILKNLNQAQKEAVKHHQGPELVLAGAGSGKTRVLTRRIGYLINHYGVSPYNILAVTFTNKAANEMKERVKEMVG-GVNSSLWVSTFHSFCVRILRREAEKL-----GYNKNFVIFDSLDQRKLVKEVLKSKNLDPKKIKPRSVLNKISSAKNELKTPEQMSSLS----GSFFD-------KTAADIYEEYQKRLKENNAMDFDDLIQQTVRLFKE 203          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A3N5UTJ7_9CHLR (DNA helicase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UTJ7_9CHLR)

HSP 1 Score: 165 bits (418), Expect = 2.490e-45
Identity = 95/217 (43.78%), Postives = 132/217 (60.83%), Query Frame = 0
Query:   98 EMEDGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLKEN 314
            E  D LN  Q  AV +  GP+ VVAGPGSGKTRVLT+R+A+L+      PW ILAVTFTNKAA EM+ RV  +L       I LGTFHS+CAR++RR  EHLP     ++  F IFDTDD  ++V  +I+EM ++    +P    + +S  K++  GP++             +  + +++K    ++  YQ+RL  SNAVDFDDLL+   RLL++N
Sbjct:    2 EFLDKLNKQQLNAVTAGNGPILVVAGPGSGKTRVLTQRIAYLIAVEGVRPWQILAVTFTNKAAKEMQARVKSLLPDQAIEGIMLGTFHSICARILRREAEHLP-----IESNFVIFDTDDQERIVKTVIREMNINEKLYRPASVHAAISRAKNELIGPDEY----------PATTYRDEIVK---RVYVEYQKRLIASNAVDFDDLLVYAARLLEDN 200          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A0M8K876_9CHLR (DNA helicase n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8K876_9CHLR)

HSP 1 Score: 174 bits (440), Expect = 2.590e-45
Identity = 102/221 (46.15%), Postives = 144/221 (65.16%), Query Frame = 0
Query:   98 EMEDGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEII-KEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLKENKGE 317
            ++ DGLNP Q+EAV +  GPV V+AGPGSGKTRVLT R+A+LV+     P+SI+AVTFTNKAA EMR R+ ++LG    G +TLGTFH++CAR++RR   HL     G +  F I+DTDD R+LV +II +++ L+    +P    + +S  K++   P + ME N      T++A           ++  YQ RL ++NA+DFDDLLL+T+RLL+E   E
Sbjct:    3 DLLDGLNPQQREAVTAIEGPVLVLAGPGSGKTRVLTHRIAYLVKVAGIEPYSIVAVTFTNKAAREMRTRLEQLLGNRAEG-VTLGTFHAICARILRRSIHHL-----GYENSFVIYDTDDQRRLVKQIIIQDLNLNEKTYRPAAVQAAISRAKNELLTP-EAMEKNAASYWETVAAR----------VYARYQERLQQANALDFDDLLLLTVRLLREVPAE 206          
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Match: A0A3M1MU06_9CHLR (DNA helicase (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A3M1MU06_9CHLR)

HSP 1 Score: 165 bits (418), Expect = 2.990e-45
Identity = 97/215 (45.12%), Postives = 133/215 (61.86%), Query Frame = 0
Query:   98 EMEDGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSILAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLPALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKSQGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDFDDLLLVTLRLLK 312
            ++ +GLN  QQ+AV +  GPV V+AGPGSGKTRVLT R+A+L+ +L A P++ILAVTFTNKAA EM  RV  +LG    G +T+GTFH+ CARL+RR  E+LP     +D  + IFD DD   LV + +K++ LD  + +P    + +S  K++ +GP D    N                +    ++  YQ+ L  SNAVDFDDLLL T RLL+
Sbjct:    2 DLLNGLNIQQQQAVTAGTGPVLVLAGPGSGKTRVLTHRIAYLIGHLGARPYNILAVTFTNKAAREMNRRVEDLLGGQTRG-LTVGTFHAFCARLLRREAEYLP-----VDSNYVIFDADDQIGLVKQALKDLNLDEKRYRPYSLHAAISNAKNELRGPEDFPVENYRD-------------EVTRRVYEHYQKLLLASNAVDFDDLLLYTARLLE 197          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10067.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP3_ECTSI3.260e-7458.41DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A1V2LZP9_9FIRM5.200e-4742.59DNA helicase n=1 Tax=Epulopiscium sp. SCG-B11WGA-E... [more]
A0A3D4JH82_9CHLR4.310e-4645.79DNA helicase (Fragment) n=1 Tax=Anaerolineae bacte... [more]
A0A402AI73_9CHLR4.990e-4644.98DNA helicase n=5 Tax=Dictyobacter TaxID=2024965 Re... [more]
A0A419EHN5_9CHLR1.300e-4546.73DNA helicase n=1 Tax=Anaerolineaceae bacterium Tax... [more]
A0A2I1V7Z4_9CORY1.410e-4546.01ATP-dependent DNA helicase n=5 Tax=Corynebacterium... [more]
A0A139D7Z1_9FIRM1.710e-4543.98DNA helicase n=3 Tax=Halanaerobium TaxID=2330 RepI... [more]
A0A3N5UTJ7_9CHLR2.490e-4543.78DNA helicase (Fragment) n=1 Tax=Chloroflexi bacter... [more]
A0A0M8K876_9CHLR2.590e-4546.15DNA helicase n=2 Tax=Ardenticatenia TaxID=1382928 ... [more]
A0A3M1MU06_9CHLR2.990e-4545.12DNA helicase (Fragment) n=1 Tax=Anaerolineae bacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 97..262
e-value: 2.2E-46
score: 159.6
NoneNo IPR availablePANTHERPTHR11070:SF7DNA HELICASE IIcoord: 100..314
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..318
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableCDDcd17932DEXQc_UvrDcoord: 104..196
e-value: 9.48746E-47
score: 154.211
IPR034739UvrD/AddA helicase, N-terminalPFAMPF00580UvrD-helicasecoord: 103..315
e-value: 1.6E-37
score: 129.8
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 100..314
IPR014016UvrD-like helicase, ATP-binding domainPROSITEPS51198UVRD_HELICASE_ATP_BINDcoord: 101..318
score: 32.532
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 101..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10067contigC-tenellus_contig10067:3105..4558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10067.1.1mRNA_C-tenellus_contig10067.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10067 3064..4749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10067.1.1 ID=prot_C-tenellus_contig10067.1.1|Name=mRNA_C-tenellus_contig10067.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=319bp
MKQVLLATLAAAAVTLGSAFHRGLSSTLAPCRRHGIALLKVTRTTLLHGS
QAAHTRTHHRRLHEDCCATWRSSYPLTAFRRDIIDGGYGELQGEGGYEME
DGLNPSQQEAVVSPVGPVRVVAGPGSGKTRVLTRRVAHLVRNLSAPPWSI
LAVTFTNKAAAEMRGRVAKILGKDVTGQITLGTFHSVCARLMRRFGEHLP
ALIPGLDRQFTIFDTDDSRKLVAEIIKEMGLDSTKVKPQWFISQMSWLKS
QGKGPNDVMELNKGRGGGTISAEKKKMLKTLAELFPIYQRRLAESNAVDF
DDLLLVTLRLLKENKGES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034739UvrD/AddA_N
IPR000212DNA_helicase_UvrD/REP
IPR014016UvrD-like_ATP-bd
IPR027417P-loop_NTPase