prot_C-tenellus_contig10052.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10052.1.1
Unique Nameprot_C-tenellus_contig10052.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length198
Homology
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BLAST of mRNA_C-tenellus_contig10052.1.1 vs. uniprot
Match: A0A835ZLI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLI9_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.980e-18
Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 0 
Query:    3 ETKFVRVIHNEKSHFIALYTGLNPEELSRLLRAAYSL-PHHVVGLMDEDSGPGHGMVVPISLACRTPEMLGEHTYSLLLSEKEVDWDR---SMGSFAGEHVKKEGSI 105
            +TK V V H   +H +ALY+G++P ELSRLL+AAY L   HVVGL   +S     +VVP+SLAC TP+++ + T+ LLL EKE+DWD    S  + AGE  +++  +
Sbjct:    2 DTKLVYVEHGGLAHHVALYSGISPTELSRLLKAAYQLRAQHVVGLQHMESR----VVVPLSLACHTPQVISQGTFGLLLCEKEIDWDARAVSARAGAGEQARQDSLV 104
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BLAST of mRNA_C-tenellus_contig10052.1.1 vs. uniprot
Match: A0A7S2MSW5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSW5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 5.190e-8
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 0 
Query:    2 AETKFVRVIHNEKSHFIALYTGLNPEELSRLLRAAYSLPHH----VVGLMDEDSGPGHGMVVPISLACRTPEMLGEHTYSLLLSEKEV 85
            A  K VRV ++ +SHF+AL++G+N EELS L    + L       + GL D       G   P+SL C  PE L E +Y+L+L  ++V
Sbjct:    4 ASAKCVRVTYDGQSHFVALFSGVNVEELSSLFAVTFRLGKRGGAMIAGLED-----AQGRSTPLSLVCLYPECLREESYTLVLHARDV 86
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10052.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZLI9_9STRA2.980e-1846.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2MSW5_9STRA5.190e-838.64Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10052contigC-tenellus_contig10052:2996..4290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10052.1.1mRNA_C-tenellus_contig10052.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10052 2996..4455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10052.1.1 ID=prot_C-tenellus_contig10052.1.1|Name=mRNA_C-tenellus_contig10052.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=198bp
MAETKFVRVIHNEKSHFIALYTGLNPEELSRLLRAAYSLPHHVVGLMDED
SGPGHGMVVPISLACRTPEMLGEHTYSLLLSEKEVDWDRSMGSFAGEHVK
KEGSIGQLPQFGKSEDPGLGWKNNDMLDSRGCFPGDPANHTPGGWNNRLY
GGPPGAPDVDQSVHARTRWGPNGIVSKEQGDEMEGGEGEKAAEEEKVE
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