prot_C-tenellus_contig10045.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10045.2.1
Unique Nameprot_C-tenellus_contig10045.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length112
Homology
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: M1C4J6_SOLTU (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1C4J6_SOLTU)

HSP 1 Score: 87.0 bits (214), Expect = 1.180e-17
Identity = 41/108 (37.96%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   11 YWKPSARLLDNDTLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDG-------HTVKEEKAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFKKSED 111
            Y +  + ++   T+RC+++VAA + W I  LD+  A+L+ DLQE+++++ P G       H  K  K++YGLKQ++ +WY  L   +  +G++SS +D  L+FKKSED
Sbjct:   74 YTETFSPVVKMTTIRCLLTVAAKKCWPIFQLDVNNAFLHGDLQEEVYMKFPAGLASPSPNHVCKLRKSLYGLKQASRQWYARLAGALSFKGYSSSLNDYSLFFKKSED 181          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: A0A2Z6NVR4_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NVR4_TRISU)

HSP 1 Score: 84.7 bits (208), Expect = 7.900e-17
Identity = 38/110 (34.55%), Postives = 68/110 (61.82%), Query Frame = 0
Query:    9 WIYWKPSARLLDNDTLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDGHTVKEE-------KAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFKKSED 111
            W+Y K  A +    T+RC++SVA  +GW +  +D++ A+L+ DL+E++++++PDG+ V +E       K++YGLKQ++  WY +L  +++  G+  S  D  L     ED
Sbjct:  563 WVY-KTFAPVAKMTTIRCLLSVAVAKGWELHQMDISNAFLHGDLEEEVYMQVPDGYQVPKEGMVCRLRKSLYGLKQASRNWYSKLSRSLINYGFQESNSDHSLVTYTKED 671          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: A0A803NS67_CANSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NS67_CANSA)

HSP 1 Score: 83.2 bits (204), Expect = 2.310e-16
Identity = 37/107 (34.58%), Postives = 69/107 (64.49%), Query Frame = 0
Query:   11 YWKPSARLLDNDTLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDGHTVKE----------EKAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFK 107
            Y++  A +   +TL+ ++++AA + W +  +D+  A+L+ DLQED++++LP G+T K           +K++YGLKQ++ +WY +L  T+L +G+  SQ+D  L+ K
Sbjct:  176 YFETYAPVAKFNTLKLLLALAAIKNWHLHHMDINNAFLHGDLQEDVYMKLPQGYTPKGVIPKNAVCKLKKSLYGLKQASRQWYAKLSTTLLKQGFKQSQNDHSLFIK 282          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: A0A438GBY8_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GBY8_VITVI)

HSP 1 Score: 81.6 bits (200), Expect = 2.690e-16
Identity = 40/109 (36.70%), Postives = 67/109 (61.47%), Query Frame = 0
Query:   11 YWKPSARLLDNDTLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDGHT-------VKEEKAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFKKSEDG 112
            Y +  A +    T+R I+++AA + W +  +D+  A+L+ DLQE+I++ LP G T        K ++++YGLKQ+   W+ + R+TIL+  +T SQ+D  L+F  SE G
Sbjct:   67 YEETFAPVAKMTTVRTILAIAASQSWQLHQMDVKNAFLHGDLQEEIYMNLPFGMTNSSPHDVCKLKRSLYGLKQAPRAWFEKFRSTILSFSFTQSQYDSSLFFHTSESG 175          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: A0A1U8G6Q2_CAPAN (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A1U8G6Q2_CAPAN)

HSP 1 Score: 81.6 bits (200), Expect = 3.860e-16
Identity = 34/97 (35.05%), Postives = 63/97 (64.95%), Query Frame = 0
Query:   23 TLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDG-------HTVKEEKAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFKKSEDG 112
            T+RC++++A  +GW ++ LD+  A+L+ DLQE+++++ P G       H  +  K++YGLKQ + +WY  L  T+  +G++   +D  L++KKS+ G
Sbjct:    3 TVRCLLAIAVKKGWDLNQLDVNNAFLHGDLQEEVYMKFPPGLCAPSPNHMCRLRKSLYGLKQDSRQWYARLTATLNFKGYSHFLNDYSLFYKKSDSG 99          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: A0A1Y6L631_ZYMTR (Uncharacterized protein n=1 Tax=Zymoseptoria tritici ST99CH_1A5 TaxID=1276529 RepID=A0A1Y6L631_ZYMTR)

HSP 1 Score: 82.0 bits (201), Expect = 7.130e-16
Identity = 32/110 (29.09%), Postives = 72/110 (65.45%), Query Frame = 0
Query:    2 GLPKMQEWIYWKPSARLLDNDTLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDGH-----TVKEEKAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYF 106
            G  +++ + + +  + ++ + + R + ++AA  GW +  +D++ A+LN DL+E+++++ P+G+      ++ +KA+YGLKQ+   WY + R  +L +GW  S++DEC+++
Sbjct: 1161 GFQQVEGFDFTETYSGVVKSASYRSLFALAALYGWHVHQMDVSTAFLNGDLEEEVYIQPPEGYPEPGKVLRLKKALYGLKQAPRAWYKKFRTWLLQQGWIVSEYDECVFY 1270          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: UPI0008FD3D37 (uncharacterized protein LOC104808371 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD3D37)

HSP 1 Score: 82.0 bits (201), Expect = 7.160e-16
Identity = 39/112 (34.82%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   12 WKPSARLLDNDTLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDGHT------------VKEEKAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFKKSED 111
            + P A+L+   T++ ++++AA + WS+  +D+T A+L+ DL EDI++ LP G+T             K +K++YGLKQ++ +WY +  + ++  G+T SQ D  L+ KK  D
Sbjct:  835 FSPVAKLV---TVKLLLALAAIKNWSLTQMDVTNAFLHGDLDEDIYMSLPPGYTPPVGQNLPKNAVCKLQKSLYGLKQASRQWYRKFSSVLINSGFTQSQADHTLFVKKQGD 943          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: UPI000904D861 (uncharacterized protein LOC109219712 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI000904D861)

HSP 1 Score: 81.3 bits (199), Expect = 8.080e-16
Identity = 34/94 (36.17%), Postives = 62/94 (65.96%), Query Frame = 0
Query:   23 TLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDG-------HTVKEEKAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFKKS 109
            T+RC++++AA R W++  LD+  A+L+ DLQE+++++ P G       H     K++YGLKQ++ +WY  L   +  +G++SS +D  L+FK++
Sbjct:    3 TIRCLLTIAAKRDWNVSQLDVNNAFLHGDLQEEVYMKFPSGLTSPSPKHVCLLRKSLYGLKQASRQWYARLAGALSFKGYSSSLNDYSLFFKRT 96          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: A0A396HFZ0_MEDTR (Putative RNA-directed DNA polymerase n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396HFZ0_MEDTR)

HSP 1 Score: 81.6 bits (200), Expect = 9.360e-16
Identity = 37/108 (34.26%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   11 YWKPSARLLDNDTLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDGHTVKEEK------AIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFKKSEDG 112
            Y + SA +    ++R ++++AA R WS+  +D+  A+LN +L+E++++  P G+T +E K      A+YGLKQ+   W+ +  +T+   G++SS HD  L+ +K+E+G
Sbjct:  380 YEETSAPVARITSVRTLLAIAASRQWSLTQMDVKNAFLNGELEEEVYMRPPPGYTCQESKVCRLRKALYGLKQAPRAWFAKFHSTVSQLGFSSSPHDSALFTRKTENG 487          
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Match: A0A2Z6MYA3_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MYA3_TRISU)

HSP 1 Score: 81.6 bits (200), Expect = 9.650e-16
Identity = 34/96 (35.42%), Postives = 63/96 (65.62%), Query Frame = 0
Query:   23 TLRCIISVAAYRGWSIDALDLTQAYLNADLQEDIWLELPDGHTVKEE-------KAIYGLKQSAMEWYHELRNTILAEGWTSSQHDECLYFKKSED 111
            T+RC++SVA  +GW +  +D++ A+L+ DL+E++++++PDG+ V +E       K++YGLKQ++  WY +L  +++  G+  S  D  L+    ED
Sbjct:  937 TIRCLLSVAVAKGWELHQMDVSNAFLHGDLEEEVYMQVPDGYQVPKEGMVCRLRKSLYGLKQASRNWYSKLSQSLINYGFQESNADHSLFTYTKED 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10045.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M1C4J6_SOLTU1.180e-1737.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z6NVR4_TRISU7.900e-1734.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A803NS67_CANSA2.310e-1634.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438GBY8_VITVI2.690e-1636.70Retrovirus-related Pol polyprotein from transposon... [more]
A0A1U8G6Q2_CAPAN3.860e-1635.05uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A1Y6L631_ZYMTR7.130e-1629.09Uncharacterized protein n=1 Tax=Zymoseptoria triti... [more]
UPI0008FD3D377.160e-1634.82uncharacterized protein LOC104808371 n=1 Tax=Taren... [more]
UPI000904D8618.080e-1636.17uncharacterized protein LOC109219712 n=1 Tax=Nicot... [more]
A0A396HFZ0_MEDTR9.360e-1634.26Putative RNA-directed DNA polymerase n=1 Tax=Medic... [more]
A0A2Z6MYA3_TRISU9.650e-1635.42Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 11..108
e-value: 1.2E-13
score: 51.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10045contigC-tenellus_contig10045:1620..1955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10045.2.1mRNA_C-tenellus_contig10045.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10045 1451..1955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10045.2.1 ID=prot_C-tenellus_contig10045.2.1|Name=mRNA_C-tenellus_contig10045.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=112bp
MGLPKMQEWIYWKPSARLLDNDTLRCIISVAAYRGWSIDALDLTQAYLNA
DLQEDIWLELPDGHTVKEEKAIYGLKQSAMEWYHELRNTILAEGWTSSQH
DECLYFKKSEDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2