mRNA_C-tenellus_contig984.4.3 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig984.4.3
Unique NamemRNA_C-tenellus_contig984.4.3
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 4.770e-87
Identity = 168/365 (46.03%), Postives = 214/365 (58.63%), Query Frame = 1
Query:   34 DAGVYPGVEYRVLEVTL-------------------------------------------------KNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLER-QWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKNDIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEA---------PKHRQ-----GGLLGGKMSDAMGPGKKG--AIRIPVVDTTTGGEAEGSV-IPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927
            + G+YPGVEYR+LE+++                                                  +  +E    L S  DA   +FD G +  T+RP+YPL++RLER  WPV++ AR+ PV+LTPF+YN ATAWA+  TS +LL+VGFVLSQA+TLS I SHSMEPTLQVGD+VLVEKVSRS L++ NDIV+FRPP  L+ +V+  GGTL  SDLF KRVA + GDTV+V A G V V A         PK        G   GG+    +G G  G       V     G  AE  V +P ++L+RI  +D  +LP+GS+FVLGDNP AS+DSRVWG LDK +IVGH LLR+FP   FGL+ 
Sbjct:  167 NQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGITRLPKGTNRADNGGSAAGGESDVILGDGVAGQEGSAAAVAAAKGGTLAEEKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGLLQ 531          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA)

HSP 1 Score: 218 bits (554), Expect = 4.420e-61
Identity = 136/291 (46.74%), Postives = 157/291 (53.95%), Query Frame = 1
Query:   52 GVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKNDIVFFRPPEALRSVVTSVGGT-LRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGL 921
            GVEYR L +T   A       L SV DA   AF+AGD+ L LRP+YPLI RLER WPV +AARDVP+ LT FAYN ATAWA+L                +TLS+IPS SMEP L+ GD+VLVEKVSR  L+R+ ++VFF PP ALR+ V   GG  LR  DLF KRVA + GD V+V   G   V     R  G L              A R  ++                              AGS FVLGDNP  SVDSRVWG L    IVG PLLR+FPL R  L
Sbjct:    5 GVEYRCLGITCGGA------PLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDL------------PRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDRAAL 277          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC)

HSP 1 Score: 202 bits (515), Expect = 9.730e-59
Identity = 130/316 (41.14%), Postives = 170/316 (53.80%), Query Frame = 1
Query:    1 PSCLPLLQSLVDAGVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKN-DIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVD-----ARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIP-ANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927
            P    + +++   GVYPGV+YRV  +                 D         D  +T+RP Y L+ +LERQWPV +A  +VP+ LTP  YNTAT  ++L+++A LLAV  V SQ  +L YIPS+SMEPTL  GD++LVEKVSR     KN DIV F PPE LR+ V   GG L   DLF KRVA   GD V+VD       G   V  P+  +   +G     A   G    + I            G   P A       V D  +L +G+++VLGDNP  SVDSR+WG L + +IVGHP++R+FP  RFG + 
Sbjct:  122 PGWAAIRENMFRKGVYPGVDYRVERI-----------------DVRANGDPIRDAVITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSRLVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTVDNGLPTINGHTYVY-PEPEEPPTIGSDAPPARADGSMQRLAI----------GRGFAWPYAGEAPSQWVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFGPVR 409          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA)

HSP 1 Score: 197 bits (501), Expect = 8.580e-55
Identity = 117/304 (38.49%), Postives = 165/304 (54.28%), Query Frame = 1
Query:   28 LVDAGVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKN---DIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLER-IHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927
            + + G YPGVEYR+L +  ++      +  G+  +              L+PVYPL+++LER WPV++  RD+P L TP  YN  +A+ SL T+A+ L V F+LSQA++L +IPS SM+PTL+VGD++LV+KVS  T  RKN   D+V F PP  L+ +V   GG L   DLF KR+A  PGD V+V   G+V V                                D   G        P  L+E+ I   +  ++    +FV+GD    SVDSRVWG L+ + IVG P++RI+PL RFG + 
Sbjct:  361 MFEQGAYPGVEYRILRILDRDGRERFTSCPGADYE--------------LKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDVNGQ-----------------------------DVVAGRRDLCEAEPLRLIEKYIEPREDKIIDQKEVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDRFGKVE 621          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO)

HSP 1 Score: 172 bits (435), Expect = 4.440e-46
Identity = 122/328 (37.20%), Postives = 169/328 (51.52%), Query Frame = 1
Query:   10 LPLLQSLVDA------GVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGA---FDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVS-----RSTLIRKND----IVFFRPPEALRSVVTSVGGT-LRESDLFAKRVAGIPGDTVSV-DARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAG--SLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927
            +P+L+SL +       G YPGVEYR+L +                +D   GA   +    V   L+P+YPL+ +LER WPV++  RD+P L TP  YN  +A  SL+T+ T L   F++SQA+++  IPS SMEPTLQVGD++LV+KV+     +  L + ND    I+ F P E+L+ +V   GG  L + +LF KRVA  PG T+ + DA G V ++  K                         P+      GE      P  L+E+  +  G     G   + VLGD    S+DSRVWG L    IVG PLLR++PLSR G I 
Sbjct:  218 VPILRSLAERPAMFRQGTYPGVEYRILRI----------------IDPETGADLFYSRPGVDYELKPIYPLVQQLERLWPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRK-------------------------PLERRDFCGEE-----PTRLIEKF-LRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVGQIQ 498          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC)

HSP 1 Score: 172 bits (436), Expect = 1.330e-45
Identity = 123/315 (39.05%), Postives = 166/315 (52.70%), Query Frame = 1
Query:   10 LPLLQSLVDA------GVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRS-----TLIRKNDIVFFRPPEALRS-VVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFG 918
            +P+LQ L         G YPGVEYR+L +   +   +        L  S+   D       L+PVYPL+ +LER WPV++  RD+P LLTP  YNT +A  SL+T+ T L V FVLSQAV+L  IPS SM PTL  GD+VLV+K++       T I   D+VFF PPE L+  VV S G  L   DLF KRVA  PGD ++VD  G V V               + A+      A  + +++      +  +   AN+           +  G + VLGD    S+DSRVWG L +  IVG P++R++P SR+G
Sbjct:  308 VPVLQKLAQRPRMFQQGAYPGVEYRILRIIDPHTNRD--------LFYSQPGAD-----YELKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAKGDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVNGA------------TPAVARETCEAEPLRLIEAYLKKASPDNPDGANVR----------IGPGQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSRWG 587          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO)

HSP 1 Score: 164 bits (416), Expect = 1.850e-44
Identity = 117/328 (35.67%), Postives = 166/328 (50.61%), Query Frame = 1
Query:   10 LPLLQSLVDA------GVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGA---FDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKN---------DIVFFRPPEALRSVVTSVGGT-LRESDLFAKRVAGIPGDTVSV-DARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAG--SLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927
            +P+L++L +       G YPGVEYR+L +                +D   GA   +    V   L+P+YPL+ +LER WPV++  +D+P L TP  YN  +A  SL T+   L   F++SQA+++  IPS SMEPTLQVGD++LV+K++     + N          IV FRP E+L+ +V   GG  L + +LF KRVA  PG T+ + DA G V ++  K                         P+      GE      P  L+E+  +  G     G   + VLGD    S+DSRVWG L    IVG PLLR++PLSR G ++
Sbjct:   86 VPILRNLAERPAMFRQGTYPGVEYRILRI----------------IDPETGADLFYSRPGVDYELKPIYPLVQQLERLWPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRK-------------------------PLERRDFCGEE-----PTRLIEKF-LRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVGQVH 366          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE)

HSP 1 Score: 157 bits (396), Expect = 9.130e-43
Identity = 94/253 (37.15%), Postives = 136/253 (53.75%), Query Frame = 1
Query:  175 LRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKN---DIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLI 924
            L+P+YPL+ +LER WPV +   ++P L T   YNT +A  SL T+   L V + LSQ ++L +IPS SM+PTL VGD+V+VEKVS       N   D++ F PP  L+ +V S GG +   DLF KRVA  P   V+V + G+V ++  + ++               K+                  S  P  L+ER        + +  +FV+GD    S+DSRVWG L  ++I+G PL R++P+ RFG I
Sbjct:   22 LKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLIDEMELQE---------------KRDMC---------------SEEPLGLIERYIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFGSI 244          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN)

HSP 1 Score: 157 bits (396), Expect = 6.120e-42
Identity = 110/304 (36.18%), Postives = 161/304 (52.96%), Query Frame = 1
Query:    1 PSCLPLLQSLVDAGVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLI-RKNDIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVD-ARGRVAVEAPK-HRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFP 903
            P  L     +   GVYPG+EYR++   +++  ++E     ++    EGA   G+V +++RP+YPL  RLER WPV +++ DVP  LT   YN+ T   + + S +++       +AV+   IPS SMEPT+  GDL+L EK+S      ++ +I+ F PP++L++VV S GG +   DLF KRVA +PGD V+VD A G V V   +  RQG                     P  D  +GG A+G V P              + +G  FVLGD    SVDSRVWG L    +   PL++++P
Sbjct:   64 PGLLQNRDRMFAVGVYPGIEYRLMG--MRDIDTKE-----TLFRVPEGA---GEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTVNGERVQRQG---------------------PTCDEPSGG-AQGLVRPQK----------GKVKSGVSFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWP 325          
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A7S4C1M9_CHRCT (Mitochondrial inner membrane protease subunit n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1M9_CHRCT)

HSP 1 Score: 139 bits (351), Expect = 5.290e-35
Identity = 100/263 (38.02%), Postives = 124/263 (47.15%), Query Frame = 1
Query:  157 GDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRS--TLIRKNDIVFFRPPEALRSVVTS------VGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHL-LPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFG 918
            G   L +RP Y LI +LER WPV++     P  +TP  YN   A  +L  + T L      S  +TLS I S SM PT+   D++LVEKVSR     +R+ D+VFF PP  LR +V +      V    R   LF KRV     D V VD  G V                                   T  GG+    V P   L  +  M   L L +G  FVLGDN  +SVDSR WG LD+  IVG P++R+FPLSRFG
Sbjct:  140 GPAILRVRPEYALIPKLERNWPVRVPVSVSPDWMTPSGYNAQVAIFALGLALTGLLGALAASTVLTLSVITSTSMAPTILPRDVLLVEKVSRRFHAPLRRGDLVFFEPPAELREIVRARAAAAGVAEPRRYGRLFVKRVVAAEDDVVGVDDHGHV-----------------------------------TLNGGDIGADVDPNGPLASLVKMQQTLPLASGKYFVLGDNADSSVDSRCWGGLDEADIVGRPVVRVFPLSRFG 367          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L442_9PHAE4.770e-8746.03Peptidase_S26 domain-containing protein n=2 Tax=Ec... [more]
A0A835YRZ1_9STRA4.420e-6146.74Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A0G4EFP7_VITBC9.730e-5941.14Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A448ZBV4_9STRA8.580e-5538.49Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A1Z5JWA6_FISSO4.440e-4637.20Mitochondrial inner membrane protease subunit n=1 ... [more]
B7G479_PHATC1.330e-4539.05Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A1Z5KRR1_FISSO1.850e-4435.67Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S1CZJ0_CYCTE9.130e-4337.15Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S0Y0G9_HEMAN6.120e-4236.18Mitochondrial inner membrane protease subunit n=2 ... [more]
A0A7S4C1M9_CHRCT5.290e-3538.02Mitochondrial inner membrane protease subunit n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig984contigC-tenellus_contig984:12055..13285 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LKT2
PFAMsPeptidase_S24
Model size930
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.45e-76
EggNOG OGs2CZ78@1|root,2S8VM@2759|Eukaryota
DescriptionPeptidase S24-like
Cds size930
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790204.0990746-CDS-C-tenellus_contig984:12054..124501680790204.0990746-CDS-C-tenellus_contig984:12054..12450Choristocarpus tenellus KU2346CDSC-tenellus_contig984 12055..12450 +
1680790204.1158717-CDS-C-tenellus_contig984:12751..132851680790204.1158717-CDS-C-tenellus_contig984:12751..13285Choristocarpus tenellus KU2346CDSC-tenellus_contig984 12752..13285 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig984.4.3prot_C-tenellus_contig984.4.3Choristocarpus tenellus KU2346polypeptideC-tenellus_contig984 12055..13285 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig984.4.3

>prot_C-tenellus_contig984.4.3 ID=prot_C-tenellus_contig984.4.3|Name=mRNA_C-tenellus_contig984.4.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=310bp
PSCLPLLQSLVDAGVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAF
DAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASL
ITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRK
NDIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVA
VEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANL
LERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIF
PLSRFGLIN*
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mRNA from alignment at C-tenellus_contig984:12055..13285+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig984.4.3 ID=mRNA_C-tenellus_contig984.4.3|Name=mRNA_C-tenellus_contig984.4.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1231bp|location=Sequence derived from alignment at C-tenellus_contig984:12055..13285+ (Choristocarpus tenellus KU2346)
CCCTCTTGTCTGCCACTTCTGCAGTCTCTTGTTGATGCTGGGGTTTACCC AGGAGTGGAGTACAGAGTTCTTGAGGTGACCCTCAAGAACGCAATGTCAG AGGAACAGACCTCCCTTGGAAGTGTGCTGGATGCATCTGAGGGGGCCTTT GATGCTGGAGATGTTTTTCTTACACTGCGACCTGTTTACCCACTGATAAG CCGGCTGGAGCGTCAGTGGCCAGTGCAACTGGCAGCGAGAGATGTTCCTG TCCTTTTGACACCATTTGCATATAACACTGCTACGGCATGGGCATCTCTG ATCACCAGTGCTACATTGCTGGCTGTTGGGTTTGTCCTTAGTCAGGCTGT AACTCTGTCATACATTCCCAGTCACAGTATGGAGCCAACATTGCAGGTAT GATATTTTCATGATGCAGGAGGTGGATAAGTCACCAGATCTTGCCACTTG TTTCTTTCCATTTCTAGCTTTTGATCGTGGGAGGATTGTCAATCAATGAG GTTCAACCATATGCAAGTACAGTAGTGATGCACTTGAGGAGTAGATGTGT ACCTTGTGTGTGTGTTGAGAGCGACTCACAGTCTTTCAGTCAACCTGCTT GCTGCCTGCATCCTAGCTCAAGTCAGGGCTCTAATTTTCCTTGGCAACAT GCTTTCCCCTCCTTCATCTGTGGTGTCTATCTCATCTGACTGACCAGGTA GGGGATCTTGTCCTGGTGGAGAAGGTATCAAGATCAACTCTTATTCGAAA GAATGATATAGTTTTCTTTCGCCCTCCTGAAGCCCTCAGAAGTGTGGTGA CCTCAGTGGGAGGAACGCTGCGTGAGAGTGATCTTTTTGCAAAACGTGTT GCTGGAATCCCCGGTGACACAGTCAGTGTAGACGCAAGGGGAAGGGTGGC AGTTGAAGCACCTAAACATCGACAGGGAGGACTGCTGGGTGGGAAGATGA GTGATGCAATGGGCCCAGGAAAGAAGGGAGCAATAAGGATTCCAGTGGTT GATACTACCACTGGAGGTGAAGCAGAGGGCAGTGTGATCCCAGCGAACTT GCTGGAACGCATACATGTCATGGATGGTCATTTGTTGCCTGCAGGATCAT TGTTTGTGTTGGGGGATAATCCTGGAGCCTCTGTTGATTCTCGAGTGTGG GGTTTGCTCGACAAACAACAGATTGTAGGGCATCCGCTTTTGAGGATTTT CCCATTGTCACGTTTTGGGCTCATCAACTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig984:12055..13285+

>mRNA_C-tenellus_contig984.4.3 ID=mRNA_C-tenellus_contig984.4.3|Name=mRNA_C-tenellus_contig984.4.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=930bp|location=Sequence derived from alignment at C-tenellus_contig984:12055..13285+ (Choristocarpus tenellus KU2346)
CCCTCTTGTCTGCCACTTCTGCAGTCTCTTGTTGATGCTGGGGTTTACCC
AGGAGTGGAGTACAGAGTTCTTGAGGTGACCCTCAAGAACGCAATGTCAG
AGGAACAGACCTCCCTTGGAAGTGTGCTGGATGCATCTGAGGGGGCCTTT
GATGCTGGAGATGTTTTTCTTACACTGCGACCTGTTTACCCACTGATAAG
CCGGCTGGAGCGTCAGTGGCCAGTGCAACTGGCAGCGAGAGATGTTCCTG
TCCTTTTGACACCATTTGCATATAACACTGCTACGGCATGGGCATCTCTG
ATCACCAGTGCTACATTGCTGGCTGTTGGGTTTGTCCTTAGTCAGGCTGT
AACTCTGTCATACATTCCCAGTCACAGTATGGAGCCAACATTGCAGGTAG
GGGATCTTGTCCTGGTGGAGAAGGTATCAAGATCAACTCTTATTCGAAAG
AATGATATAGTTTTCTTTCGCCCTCCTGAAGCCCTCAGAAGTGTGGTGAC
CTCAGTGGGAGGAACGCTGCGTGAGAGTGATCTTTTTGCAAAACGTGTTG
CTGGAATCCCCGGTGACACAGTCAGTGTAGACGCAAGGGGAAGGGTGGCA
GTTGAAGCACCTAAACATCGACAGGGAGGACTGCTGGGTGGGAAGATGAG
TGATGCAATGGGCCCAGGAAAGAAGGGAGCAATAAGGATTCCAGTGGTTG
ATACTACCACTGGAGGTGAAGCAGAGGGCAGTGTGATCCCAGCGAACTTG
CTGGAACGCATACATGTCATGGATGGTCATTTGTTGCCTGCAGGATCATT
GTTTGTGTTGGGGGATAATCCTGGAGCCTCTGTTGATTCTCGAGTGTGGG
GTTTGCTCGACAAACAACAGATTGTAGGGCATCCGCTTTTGAGGATTTTC
CCATTGTCACGTTTTGGGCTCATCAACTGA
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