mRNA_C-tenellus_contig984.4.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE) HSP 1 Score: 279 bits (714), Expect = 4.770e-87 Identity = 168/365 (46.03%), Postives = 214/365 (58.63%), Query Frame = 1 Query: 34 DAGVYPGVEYRVLEVTL-------------------------------------------------KNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLER-QWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKNDIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEA---------PKHRQ-----GGLLGGKMSDAMGPGKKG--AIRIPVVDTTTGGEAEGSV-IPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927 + G+YPGVEYR+LE+++ + +E L S DA +FD G + T+RP+YPL++RLER WPV++ AR+ PV+LTPF+YN ATAWA+ TS +LL+VGFVLSQA+TLS I SHSMEPTLQVGD+VLVEKVSRS L++ NDIV+FRPP L+ +V+ GGTL SDLF KRVA + GDTV+V A G V V A PK G GG+ +G G G V G AE V +P ++L+RI +D +LP+GS+FVLGDNP AS+DSRVWG LDK +IVGH LLR+FP FGL+ Sbjct: 167 NQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGITRLPKGTNRADNGGSAAGGESDVILGDGVAGQEGSAAAVAAAKGGTLAEEKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGLLQ 531
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA) HSP 1 Score: 218 bits (554), Expect = 4.420e-61 Identity = 136/291 (46.74%), Postives = 157/291 (53.95%), Query Frame = 1 Query: 52 GVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKNDIVFFRPPEALRSVVTSVGGT-LRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGL 921 GVEYR L +T A L SV DA AF+AGD+ L LRP+YPLI RLER WPV +AARDVP+ LT FAYN ATAWA+L +TLS+IPS SMEP L+ GD+VLVEKVSR L+R+ ++VFF PP ALR+ V GG LR DLF KRVA + GD V+V G V R G L A R ++ AGS FVLGDNP SVDSRVWG L IVG PLLR+FPL R L Sbjct: 5 GVEYRCLGITCGGA------PLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDL------------PRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDRAAL 277
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC) HSP 1 Score: 202 bits (515), Expect = 9.730e-59 Identity = 130/316 (41.14%), Postives = 170/316 (53.80%), Query Frame = 1 Query: 1 PSCLPLLQSLVDAGVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKN-DIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVD-----ARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIP-ANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927 P + +++ GVYPGV+YRV + D D +T+RP Y L+ +LERQWPV +A +VP+ LTP YNTAT ++L+++A LLAV V SQ +L YIPS+SMEPTL GD++LVEKVSR KN DIV F PPE LR+ V GG L DLF KRVA GD V+VD G V P+ + +G A G + I G P A V D +L +G+++VLGDNP SVDSR+WG L + +IVGHP++R+FP RFG + Sbjct: 122 PGWAAIRENMFRKGVYPGVDYRVERI-----------------DVRANGDPIRDAVITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSRLVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTVDNGLPTINGHTYVY-PEPEEPPTIGSDAPPARADGSMQRLAI----------GRGFAWPYAGEAPSQWVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFGPVR 409
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA) HSP 1 Score: 197 bits (501), Expect = 8.580e-55 Identity = 117/304 (38.49%), Postives = 165/304 (54.28%), Query Frame = 1 Query: 28 LVDAGVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKN---DIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLER-IHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927 + + G YPGVEYR+L + ++ + G+ + L+PVYPL+++LER WPV++ RD+P L TP YN +A+ SL T+A+ L V F+LSQA++L +IPS SM+PTL+VGD++LV+KVS T RKN D+V F PP L+ +V GG L DLF KR+A PGD V+V G+V V D G P L+E+ I + ++ +FV+GD SVDSRVWG L+ + IVG P++RI+PL RFG + Sbjct: 361 MFEQGAYPGVEYRILRILDRDGRERFTSCPGADYE--------------LKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDVNGQ-----------------------------DVVAGRRDLCEAEPLRLIEKYIEPREDKIIDQKEVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDRFGKVE 621
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO) HSP 1 Score: 172 bits (435), Expect = 4.440e-46 Identity = 122/328 (37.20%), Postives = 169/328 (51.52%), Query Frame = 1 Query: 10 LPLLQSLVDA------GVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGA---FDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVS-----RSTLIRKND----IVFFRPPEALRSVVTSVGGT-LRESDLFAKRVAGIPGDTVSV-DARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAG--SLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927 +P+L+SL + G YPGVEYR+L + +D GA + V L+P+YPL+ +LER WPV++ RD+P L TP YN +A SL+T+ T L F++SQA+++ IPS SMEPTLQVGD++LV+KV+ + L + ND I+ F P E+L+ +V GG L + +LF KRVA PG T+ + DA G V ++ K P+ GE P L+E+ + G G + VLGD S+DSRVWG L IVG PLLR++PLSR G I Sbjct: 218 VPILRSLAERPAMFRQGTYPGVEYRILRI----------------IDPETGADLFYSRPGVDYELKPIYPLVQQLERLWPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRK-------------------------PLERRDFCGEE-----PTRLIEKF-LRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVGQIQ 498
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC) HSP 1 Score: 172 bits (436), Expect = 1.330e-45 Identity = 123/315 (39.05%), Postives = 166/315 (52.70%), Query Frame = 1 Query: 10 LPLLQSLVDA------GVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRS-----TLIRKNDIVFFRPPEALRS-VVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFG 918 +P+LQ L G YPGVEYR+L + + + L S+ D L+PVYPL+ +LER WPV++ RD+P LLTP YNT +A SL+T+ T L V FVLSQAV+L IPS SM PTL GD+VLV+K++ T I D+VFF PPE L+ VV S G L DLF KRVA PGD ++VD G V V + A+ A + +++ + + AN+ + G + VLGD S+DSRVWG L + IVG P++R++P SR+G Sbjct: 308 VPVLQKLAQRPRMFQQGAYPGVEYRILRIIDPHTNRD--------LFYSQPGAD-----YELKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAKGDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVNGA------------TPAVARETCEAEPLRLIEAYLKKASPDNPDGANVR----------IGPGQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSRWG 587
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO) HSP 1 Score: 164 bits (416), Expect = 1.850e-44 Identity = 117/328 (35.67%), Postives = 166/328 (50.61%), Query Frame = 1 Query: 10 LPLLQSLVDA------GVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGA---FDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKN---------DIVFFRPPEALRSVVTSVGGT-LRESDLFAKRVAGIPGDTVSV-DARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAG--SLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLIN 927 +P+L++L + G YPGVEYR+L + +D GA + V L+P+YPL+ +LER WPV++ +D+P L TP YN +A SL T+ L F++SQA+++ IPS SMEPTLQVGD++LV+K++ + N IV FRP E+L+ +V GG L + +LF KRVA PG T+ + DA G V ++ K P+ GE P L+E+ + G G + VLGD S+DSRVWG L IVG PLLR++PLSR G ++ Sbjct: 86 VPILRNLAERPAMFRQGTYPGVEYRILRI----------------IDPETGADLFYSRPGVDYELKPIYPLVQQLERLWPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRK-------------------------PLERRDFCGEE-----PTRLIEKF-LRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVGQVH 366
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE) HSP 1 Score: 157 bits (396), Expect = 9.130e-43 Identity = 94/253 (37.15%), Postives = 136/253 (53.75%), Query Frame = 1 Query: 175 LRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLIRKN---DIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFGLI 924 L+P+YPL+ +LER WPV + ++P L T YNT +A SL T+ L V + LSQ ++L +IPS SM+PTL VGD+V+VEKVS N D++ F PP L+ +V S GG + DLF KRVA P V+V + G+V ++ + ++ K+ S P L+ER + + +FV+GD S+DSRVWG L ++I+G PL R++P+ RFG I Sbjct: 22 LKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLIDEMELQE---------------KRDMC---------------SEEPLGLIERYIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFGSI 244
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN) HSP 1 Score: 157 bits (396), Expect = 6.120e-42 Identity = 110/304 (36.18%), Postives = 161/304 (52.96%), Query Frame = 1 Query: 1 PSCLPLLQSLVDAGVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFDAGDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRSTLI-RKNDIVFFRPPEALRSVVTSVGGTLRESDLFAKRVAGIPGDTVSVD-ARGRVAVEAPK-HRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHLLPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFP 903 P L + GVYPG+EYR++ +++ ++E ++ EGA G+V +++RP+YPL RLER WPV +++ DVP LT YN+ T + + S +++ +AV+ IPS SMEPT+ GDL+L EK+S ++ +I+ F PP++L++VV S GG + DLF KRVA +PGD V+VD A G V V + RQG P D +GG A+G V P + +G FVLGD SVDSRVWG L + PL++++P Sbjct: 64 PGLLQNRDRMFAVGVYPGIEYRLMG--MRDIDTKE-----TLFRVPEGA---GEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTVNGERVQRQG---------------------PTCDEPSGG-AQGLVRPQK----------GKVKSGVSFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWP 325
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Match: A0A7S4C1M9_CHRCT (Mitochondrial inner membrane protease subunit n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1M9_CHRCT) HSP 1 Score: 139 bits (351), Expect = 5.290e-35 Identity = 100/263 (38.02%), Postives = 124/263 (47.15%), Query Frame = 1 Query: 157 GDVFLTLRPVYPLISRLERQWPVQLAARDVPVLLTPFAYNTATAWASLITSATLLAVGFVLSQAVTLSYIPSHSMEPTLQVGDLVLVEKVSRS--TLIRKNDIVFFRPPEALRSVVTS------VGGTLRESDLFAKRVAGIPGDTVSVDARGRVAVEAPKHRQGGLLGGKMSDAMGPGKKGAIRIPVVDTTTGGEAEGSVIPANLLERIHVMDGHL-LPAGSLFVLGDNPGASVDSRVWGLLDKQQIVGHPLLRIFPLSRFG 918 G L +RP Y LI +LER WPV++ P +TP YN A +L + T L S +TLS I S SM PT+ D++LVEKVSR +R+ D+VFF PP LR +V + V R LF KRV D V VD G V T GG+ V P L + M L L +G FVLGDN +SVDSR WG LD+ IVG P++R+FPLSRFG Sbjct: 140 GPAILRVRPEYALIPKLERNWPVRVPVSVSPDWMTPSGYNAQVAIFALGLALTGLLGALAASTVLTLSVITSTSMAPTILPRDVLLVEKVSRRFHAPLRRGDLVFFEPPAELREIVRARAAAAGVAEPRRYGRLFVKRVVAAEDDVVGVDDHGHV-----------------------------------TLNGGDIGADVDPNGPLASLVKMQQTLPLASGKYFVLGDNADSSVDSRCWGGLDEADIVGRPVVRVFPLSRFG 367 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig984.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig984.4.3 >prot_C-tenellus_contig984.4.3 ID=prot_C-tenellus_contig984.4.3|Name=mRNA_C-tenellus_contig984.4.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=310bp PSCLPLLQSLVDAGVYPGVEYRVLEVTLKNAMSEEQTSLGSVLDASEGAFback to top mRNA from alignment at C-tenellus_contig984:12055..13285+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig984.4.3 ID=mRNA_C-tenellus_contig984.4.3|Name=mRNA_C-tenellus_contig984.4.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1231bp|location=Sequence derived from alignment at C-tenellus_contig984:12055..13285+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig984:12055..13285+ >mRNA_C-tenellus_contig984.4.3 ID=mRNA_C-tenellus_contig984.4.3|Name=mRNA_C-tenellus_contig984.4.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=930bp|location=Sequence derived from alignment at C-tenellus_contig984:12055..13285+ (Choristocarpus tenellus KU2346)back to top |