mRNA_C-tenellus_contig9786.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI) HSP 1 Score: 338 bits (866), Expect = 5.860e-103 Identity = 161/268 (60.07%), Postives = 202/268 (75.37%), Query Frame = 1 Query: 1 MNSLFFDYPCKAANSDTV-VPSIDLAWCKSENVLACAMEHGGIAFYEDEGAEIISARIRRDNNQRSNTMEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIHRLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQYRR-NSTITAAVFCPVPAQTTEMMAQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLMAHQLCVGEDEIVSQFMKVKLSVSAASLQESGLREV 798 MNSLFFDYPCK D + DLAWCKSEN+LACA++ G +A Y+DEGAE+++A I R N QR++ M+WSPRG++L +GW DGQVS WNVMEPL++ S+C C+N +H+ P+ G++C+WK D RGN+ PS+QYRR NS ITAAVFC P+ + + +AQ FS SFFF+TE+G VCYADDLGHC++VQQLTS VDRL+FYE RRLV+ITRSLLM QL VGED VSQFMKVKLSVSA+S++E+GLREV Sbjct: 1 MNSLFFDYPCKGDGRDERGAVTTDLAWCKSENLLACALDSGRVAVYQDEGAEVVAASIARGNRQRASVMDWSPRGRLLAIGWVDGQVSTWNVMEPLQEDTSICACSNQGVHKQPIXXXXXXXXXXXXXXXXKGGVICVWKADARGNMAPSVQYRRKNSAITAAVFCGSPSHSADALAQAFSPSFFFSTESGAVCYADDLGHCSEVQQLTSPVDRLMFYEAARRLVVITRSLLMT-QLQVGEDGRVSQFMKVKLSVSASSVRETGLREV 267
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: A0A835YKN9_9STRA (Putative intraflagellar transport protein 140 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN9_9STRA) HSP 1 Score: 277 bits (709), Expect = 9.650e-82 Identity = 141/268 (52.61%), Postives = 181/268 (67.54%), Query Frame = 1 Query: 1 MNSLFFDYPCKAANSDTVVPSIDLAWCKSENVLACAMEHGGIAFYEDEGAEIISARIRRDNNQRSNTMEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIHRLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGN-VTPSLQYRRNSTITAAVFC-PVPAQTTEMMAQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLMAHQLCVGEDEIVSQFMKVKLSVSAASLQESGLREV 798 M+SLFFDY C ++ L WCKSE +LA A E G I FY+DEG +A I R+ + + M+W +GK L VGW DGQ+S+W+V + ++ S + C+CAN ++HR PVTLL+WN +GT LVTGD AG VC+WK D G V P +QYR+ +TAAVFC + S FFFAT+TG VCYADDLGHCTD+QQL S VD L+FYE RL+++TRSLLM QL V +D V+QFMKVKLSVSAA++ E G+R+V Sbjct: 1 MSSLFFDYKCSGGSTAAATA---LTWCKSEYLLAVAAEDGHIYFYQDEGVVAPAATIVRETHVPT-LMDWHKKGKTLAVGWADGQISLWSVQDQIQDSRTTCSCANGAVHRAPVTLLLWNPAGTCLVTGDAAGTVCVWKCDSHGGTVLPLVQYRKKGAVTAAVFCGSTSSSQXXXXXXXLSPPFFFATDTGTVCYADDLGHCTDIQQLGSCVDTLMFYEGAMRLIVVTRSLLMV-QLQVADDAHVTQFMKVKLSVSAAAVAERGVRDV 263
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: A0A067BVJ5_SAPPC (ANAPC4_WD40 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BVJ5_SAPPC) HSP 1 Score: 169 bits (429), Expect = 3.600e-44 Identity = 104/270 (38.52%), Postives = 148/270 (54.81%), Query Frame = 1 Query: 7 SLFFDYPCKAANSDTVVPSIDLAWCKSENVLACAMEHGGIAFYEDEGAEIISARIRRDNNQRSNTMEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIHRLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQYRRNSTITAAVFCPVPAQTTE-------MMAQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLMAHQLCVGEDEIVSQFMKVKLSVSAASLQESGLRE 795 +LF+DY + + + S AW +SE++LA A+++ + F+ DEG ++ + R + S + W PRG L V W DG VS+W E + + S H +TLL W G RLVTGD GI+ +WKVD R +T + QY R ++T VFC P + + A SFFF + G V YADDLGH +DVQ L+ ++D ++FYEE RLV+ITR+ + QL + D V MK KLSVSA ++GL+E Sbjct: 2 ALFYDYLVELPPNTRQLCS---AWSESESILAVALDNREVHFFSDEGKKLPATVHLRKADIMS--IAWQPRGTALAVAWGDGMVSLWVPKENAAREVN-------SPHTTRLTLLKWAPFGNRLVTGDENGILAVWKVDARSQMTLATQYTRQGSLTQCVFCVSPQKREKEAKGDVSFSATAACPSFFFGGDIGSVHYADDLGHISDVQMLSHAIDCMMFYEEKHRLVVITRTSQLV-QLQIASDGTVKPVMKGKLSVSA----DTGLKE 254
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: A0A1V9YNK8_9STRA (Intraflagellar Transport protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNK8_9STRA) HSP 1 Score: 166 bits (421), Expect = 4.220e-43 Identity = 102/268 (38.06%), Postives = 144/268 (53.73%), Query Frame = 1 Query: 7 SLFFDYPCKAANSDTVVPSIDLAWCKSENVLACAMEHGGIAFYEDEGAEIISARIRRDNNQRSNTMEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIHRLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQYRRNSTITAAVFCPVPAQTTEMMAQVFSL-----SFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLMAHQLCVGEDEIVSQFMKVKLSVSAASLQESGLRE 795 +LF+DY + + S AW ++E++LA +++ I F+ DEG ++ A R + + + W PRG L V W DG VS+W E + + S H + LL W SG RL+TGD G++ +WKVD R ++ + QY R ++T VFC PA+ FS SFFF + G V YADDLGH +DVQ L ++D ++FYEE RLV+ITR+ + QL V D V MK KLSV +SGL+E Sbjct: 2 ALFYDYLVDLPANTRQLCS---AWSETESILAIGLDNREIHFFSDEGEKLPVAIHTRKADIMA--IAWQPRGTALAVSWGDGMVSLWIPKESAAREVN-------SPHTTRINLLKWAPSGNRLITGDENGVLAVWKVDARSQMSLATQYTRQGSLTQCVFCVSPAKKDAKGDVAFSATATCPSFFFGGDLGTVHYADDLGHISDVQTLNHAIDYMMFYEEKHRLVVITRASQLM-QLQVAADGTVKPVMKGKLSVQG----DSGLKE 252
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: F0YHE0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHE0_AURAN) HSP 1 Score: 147 bits (371), Expect = 2.000e-36 Identity = 98/297 (33.00%), Postives = 143/297 (48.15%), Query Frame = 1 Query: 7 SLFFDYPCKAANSDTVVPSIDLAWCKSENVLACAMEHGGIAFYEDEGAEIISARIRRDNNQRSNTMEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIH-RLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQY---RRNSTI---TAAVFCP--------------------------VPAQTTEMMAQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLMAHQLCVGEDEIVSQFMKVKLSVSAASLQESGLREV 798 SLF D+PC V +AWC E + A + I+FY +EG + RI+R + + + W P+ K L GW DG V++W + P N S H R PV + +WN TRLVTGD AG + +WKV P +QY + I T FC + E +AQ FS +FF T +G + YADD+GH T+VQ L + +D ++F+E RLV++TR+L++ QL +G D V MK+K++V A E G++ + Sbjct: 2 SLFLDFPCSLPGKTKVTA---VAWCTVEPICAIVTDDHCISFYLEEGICLDECRIQRKTD--ATVVVWHPKMKALASGWEDGCVAVWGLTMP----------PNSSGHGRAPVRIAMWNPLATRLVTGDAAGAITVWKV------LPMIQYSIIQAEGLIGRHTCQSFCSKRILYRVRNHLLRGLPRIASKVSRLELAQARAETLAQAFSPAFFIGTRSGSLYYADDVGHTTEVQALGARIDHMLFFEAKSRLVLLTRALVLV-QLQIGSDGKVIPVMKMKVAV-AGGAAERGIKHI 275
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: A0A7S0SRA0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRA0_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.070e-36 Identity = 97/282 (34.40%), Postives = 142/282 (50.35%), Query Frame = 1 Query: 7 SLFFDYPCKAANSDTVVPSIDLAWCKSENVLACA---MEHGG-----IAFYEDEGAEIISARIRRDNNQRSNTMEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIHRLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQYRRNSTITAAVFCPVPAQT----------TEMMAQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLMAHQLCVGEDEIVSQFMKVKLSVSAASLQESGLREV 798 S+F CK N + L+W ++++ A A ++H + F EG +I I D Q + EW P GKI+ +GW DG +S W V KS +V T +N S D RG ++P QY+R IT A+F +P ++ + +S SFFF T+ G++ YADDLGHC+DVQQL S +D ++F+EE RL+IITRSLL++ Q VGED VS+ +VKLS++ +L ++GL+ V Sbjct: 2 SVFLISQCKFDNETY---ANQLSWSNNDSIAAIASYSIDHNDKESYQVLFVNSEGIQITGPTIAHD--QEATVFEWQPNGKIVVIGWADGMISSWLVDG---KSRAVSTYSNSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVRGTLSPIRQYKRKGAITTAIFYVLPVKSDLLRKNENNSSSTSKNSYSPSFFFGTDQGVIVYADDLGHCSDVQQLPSIIDIMLFFEEKSRLIIITRSLLLS-QYQVGEDGKVSRLSQVKLSITGDNL-DNGLKYV 273
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: A0A7S2G5B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5B5_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.020e-35 Identity = 73/167 (43.71%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 202 MEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIHR-LPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQYRRNSTITAAVFCPVP--AQTTEMMAQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLM 693 M W + KIL GW DG ++I++ L C +N H ++ L+WN +RLV+GD AG+V +WK D RG ++ QY+ NS TA VF ++++ FS SFF+ TE G V +ADDLGH T+VQ L+SSVD + FY + RLVIITR+LLM Sbjct: 5 MVWQAKNKILATGWEDGHIAIYS----LNNQKLDCVYSNDKDHSGARLSFLMWNPMSSRLVSGDSAGVVRVWKSDSRGALSMYKQYKCNSATTAGVFSTAGHMQSRSDVLGHAFSPSFFYGTEDGKVYFADDLGHMTEVQALSSSVDCMKFYGDKSRLVIITRALLM 167
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: A0A7S3JPF7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPF7_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.490e-34 Identity = 91/260 (35.00%), Postives = 136/260 (52.31%), Query Frame = 1 Query: 1 MNSLFFDYPCKAANSDTVVPSIDLAWCKSENVLACAMEHGGIAFYEDEGAEIISARIRRDNNQRSNTMEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIHRLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQYRRN-STITAAVFCPVPAQTTE-----MMAQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLMAHQLCVGEDEIVSQFMKVKLSVS 762 M SLF D+PC N +AWC + + A A I FY +EG + I R + ++ W PRGK+L GW DG V + + SAS ++ R ++++ WN + TR+V+ D++G V +WK + G +T QY S + A+FCPV A E +MA++ F TE G + ADD+G VQ SV+ L+F+E+ RRLV++TR+ ++A QL + ED V M +KLSV+ Sbjct: 1 MASLFLDFPCGKKNEKNANVKC-IAWCDTAAICAVATSDSCIRFYGEEGVSLNDCGIER--KFEATSIAWQPRGKVLATGWEDGHVGTYAIAGN-GCSASPRFSSDNEHSRFSLSVIRWNAARTRVVSCDLSGRVVVWKAEICGEMTELKQYDTGGSPVRQALFCPVLAIRQEKSGDSLMARIL---VFVGTERGTLVVADDVGESRQVQNFGESVEHLLFHEQERRLVLLTRNAILA-QLQISEDGKVIPVMTMKLSVA 252
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: A0A662X2V3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2V3_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.740e-34 Identity = 97/288 (33.68%), Postives = 140/288 (48.61%), Query Frame = 1 Query: 1 MNSLFFDYPCKAANSDTVVPSIDLAWCKSENVLACAMEHGGIAFYEDEGAEIISARIRRDNNQRSNTMEWSPRGKILGVGWTDGQVSIWNVMEPLRKSASV-CTCANLSI-------------------------HRLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQYRRNSTITAAVFCPVPA-------QTTEMMAQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSL-LMAHQLCVGEDEIVSQFMKVKLSVS 762 M +LF+DY + + V S+ W + VLA A+E+ I F+ DEG + + TM W PRG+ L VGW+DG++S+ + + SV C L++ H V LL W G RL++ D GI+ +WKVD R +T S QY R + T VF P+ + E +Q FFF E G V YADDLGH +D+Q L ++D ++F+EE RL++ITR+L L +Q+ G V KVKLS++ Sbjct: 1 MCALFYDYNVQVPANLRQVCSV---WSELHPVLAVALENREIQFFSDEGEKQQGSETY-SRGADVVTMAWQPRGEALAVGWSDGRLSLARSPVAVGMALSVDCLALELTLFPHDTAGMVSLWVFKDQTAREVNSPHSSRVGLLKWTPLGNRLISADENGILAVWKVDSRCQLTLSTQYARQGSFTHCVFAAQPSLPKDKEIKRYEQFSQYACPQFFFGGEVGSVHYADDLGHISDIQVLNHAIDAMMFFEEQGRLLVITRALQLNVYQVLCGGT--VKHLTKVKLSLA 282
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Match: A0A1W0AAB5_9STRA (Intraflagellar Transport Protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAB5_9STRA) HSP 1 Score: 140 bits (353), Expect = 5.020e-34 Identity = 93/272 (34.19%), Postives = 136/272 (50.00%), Query Frame = 1 Query: 7 SLFFDYPCKAANSDTVVPSIDLAWCKSENVLACAMEHGGIAFYEDEGAEIISARIRRDNNQRSNTME--WSPRGKILGVGWTDGQVSIWNVMEPLRKSASVCTCANLSIHRLPVTLLIWNQSGTRLVTGDVAGIVCIWKVDGRGNVTPSLQYRRNSTITAAVFCPVPAQTTEMM-------AQVFSLSFFFATETGMVCYADDLGHCTDVQQLTSSVDRLVFYEETRRLVIITRSLLMAHQLCVGEDEIVSQFMKVKLSVSAASLQESGLRE 795 +LF+DYP + + S AW +SE +LA +++ + FY DEG ++ S ++++++ ME W PRG L V W+DG VS+W E + + S H + LL K+D R +T + QY R ++T VFC P + + + A SFFF + G V YADDLGH +DVQ L ++D ++FYEE RLV+ITR+ + QL V D V +KVKLSVS E+ L+E Sbjct: 2 ALFYDYPVDLPANTRQLCS---AWSESEAILAVGLDNREVHFYSDEGEKLQSPV----HSRKADVMEIAWQPRGNALAVSWSDGMVSLWIPKENAAREVN-------SPHTTRINLLKXXXXXXXXXXXXXXXXXXXXKIDARSQMTLATQYTRQGSLTQCVFCITPQKREKEVKGDITFSATAACPSFFFGGDLGSVHYADDLGHISDVQTLNHAIDCMMFYEEQHRLVVITRAAHLV-QLQVASDGTVKPVLKVKLSVSG----ENSLKE 254 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9786.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9786.2.1 >prot_C-tenellus_contig9786.2.1 ID=prot_C-tenellus_contig9786.2.1|Name=mRNA_C-tenellus_contig9786.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=266bp MNSLFFDYPCKAANSDTVVPSIDLAWCKSENVLACAMEHGGIAFYEDEGAback to top mRNA from alignment at C-tenellus_contig9786:2815..5469+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9786.2.1 ID=mRNA_C-tenellus_contig9786.2.1|Name=mRNA_C-tenellus_contig9786.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2655bp|location=Sequence derived from alignment at C-tenellus_contig9786:2815..5469+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9786:2815..5469+ >mRNA_C-tenellus_contig9786.2.1 ID=mRNA_C-tenellus_contig9786.2.1|Name=mRNA_C-tenellus_contig9786.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=798bp|location=Sequence derived from alignment at C-tenellus_contig9786:2815..5469+ (Choristocarpus tenellus KU2346)back to top |