mRNA_C-tenellus_contig9725.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI) HSP 1 Score: 352 bits (903), Expect = 1.420e-112 Identity = 186/335 (55.52%), Postives = 241/335 (71.94%), Query Frame = 3 Query: 303 GEEPSSRADFGKFSAAALLGVTLVSS---------PTSSPAIGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKK-TGNAEDIEAD-DVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEAINVGSVYSKLAILADGVEQIGERIGASF-VGKAPGVGTRVAVTEDPDGYGIALVEYEDWVKELPK 1271 G EP+ R DF + SAA L G + + P+++ AIGDL+E ++Q RFAQH V VPDM AL FYV G+GM+++RTR NTT VGFGPEAL VPP F GVS+ N YGGHF++ELN+ K+ G AED E D D FYD G GVQ++QIAVD+YRIS+VV GG + SG+GYL+V+APGGLRL +LSG RRDPPMF+AVKV+DMK++++WYT+V GM++ +P AR SP+EPEQP SVFMA++G++ G++LIPA + + IN GSV S +A+LA+ VE+I E +G V A G G VAV DPDGYG+ VEY DW +LP+ Sbjct: 76 GAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVS-VAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVA-DPDGYGVKFVEYSDWRGQLPR 408
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 320 bits (820), Expect = 1.250e-100 Identity = 173/312 (55.45%), Postives = 217/312 (69.55%), Query Frame = 3 Query: 348 AALLGVTLVSSPTSSPAIGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRV--VERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIEL-NALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLAR-VKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEA--INVGSVYSKLAILADGVEQIGERIGASFVGKAPGVGTRVAVTEDPDGYGIALVEYEDWVKEL 1265 A+ V + SP AIG+L ET +Q RF QH VVNVPD++ A+ FY +GLGM+++R+R TNTTFV +GPE L+VP D+ PGVS+F +YGGHFS+EL L + E FYD G GVQYIQIAVD YRISKV+A GG V+ FGY GGL++N+ SG RRDP MFVA+KV D+KK+++WYT+VLGMSQ YP AR DS +EP+QPK SVFM +D D +G+LLIP + + I VGS YSKLA+LA VE G+R+GA + GKAPG T VAV DPDGY LVEY+D+ +EL Sbjct: 79 ASACAVLVAGSPEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGEL-----PFYDPGNGVQYIQIAVDTYRISKVIAAGGEVI--FGY------GGLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVGAMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 264 bits (675), Expect = 2.810e-79 Identity = 146/323 (45.20%), Postives = 205/323 (63.47%), Query Frame = 3 Query: 348 AALLGVTLV----SSPTSSPAIGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEA---INVGSVYSKLAILADGVEQIGER---------IGASFVGKAPGVGTRVAVTEDP-DGYGIALVEYEDWVKEL 1265 A +LG ++ S P ++ AIG+L E + RF QH+V+NVPDM AL FY+ GL MQ+LR+R+V N+TFVG+GPE L P + PGVS+F+ YG HF++ELN + KT E D D G Y+Q+AV + R+SK+ GG + S +G++ V +PGGLR ++ G RRDP M +A+ V D++KA +Y LGM + YPL+R+ +S YEP+QPK S F+AF+ D G+LL+P + EA + +G V KLAIL G + +G+ + F G+APG+GT+VAVT+DP G G+ LVE ED KEL Sbjct: 40 AGVLGSSITGAFPSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKTE-----EGDTPVLDPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAIL--GTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTQDPVTGLGVVLVEAEDLEKEL 355
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 256 bits (655), Expect = 7.400e-77 Identity = 140/303 (46.20%), Postives = 191/303 (63.04%), Query Frame = 3 Query: 399 IGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRV--VERTNTTFVGFGPEALS---VPPDFRPGVSTFNSYGGHFSIEL--NALKKTGNAEDIEADDVF--YDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVK-DSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEA----INVGSVYSKLAILADGVEQIGERIGASFVGKAPGVGTRVAVTEDPDGYGIALVEYEDWVKEL 1265 +G L ETQN R+ QH VVNVP MD AL+FY +GLGM+++RTR + N TFVG+GPE L V FRPG+S++N YG HF++EL + ++D +A V Y+ G GVQ++QIA+ R+S++ GG + +G++EV APGGL L I+ GERRDP MF V+D+ A +Y LGM +L Y AR DSP EP+QP+ S +M + D+ G+LL+ + A I VGSV+ KLAIL+ V + G + A F G PG+GT VA +D GYG+ LVEY+D+ KEL Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA) HSP 1 Score: 248 bits (632), Expect = 4.320e-74 Identity = 130/270 (48.15%), Postives = 182/270 (67.41%), Query Frame = 3 Query: 342 SAAALLGVTLVSSPTSSP--AIGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEAINVGSVYSKLAILADGVEQIGE 1145 S++A+LG +S S P +IG+L E + +F QH+VV V DMD AL+F +KGL M +LRTR+V+ N TFVG+GPE LS P DF PGVS+F YGGHFS+EL + T E + + GT +QYIQ+A N K++ GG + G+GY +V+AP GL + + RDP ++A+KV+DMKK+I +Y +VLGM +L+Y + RVKDS +EP QPK SV M ++ +S +LLIPA R + I VG+V++KLAI+ +GVE IG+ Sbjct: 11 SSSAILGSVALSQGLSQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLEL--VSPTTPLEQRKP--FANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGK 276
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7S2G3S5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3S5_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.020e-61 Identity = 123/289 (42.56%), Postives = 177/289 (61.25%), Query Frame = 3 Query: 432 RFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERR-DPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVK-DSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRN-----EAINVGSVYSKLAILAD----GVEQIGERIGASFVGKAPGVGTRVAVTEDPDGYGIALVEYEDWVKEL 1265 R H VVN DMD L F + GL M++L T + NTTFVGFGP L+VPP F PGVS++ YGGHFS++L + E ++ ++ G G++YI++ V YRISK++ GGT+ S +G+ V APGGLR ++ G++ DP MF A+ V+D+K A +YT+ LGM +L P AR DSP+EP PK SV++++ D+ G++L+P + I VGSV+ LAIL D G +QI +R G++ G R + DPDG+GI L+EY D+ K++ Sbjct: 52 RVTTHAVVNTGDMDAMLQFLLLGLNMEVLDTTMDGTVNTTFVGFGPRQLTVPPQFIPGVSSWEEYGGHFSLKLVSDTSERTKEQVQV----FEPGNGLEYIKLGVPRYRISKLIEYGGTLESSYGFTMVRAPGGLRFQVVLGDQVIDPMMFAALNVKDIKAAEAFYTQ-LGMRRLPSPHARAALDSPFEPSPPKGSVYLSYAPDTFGVMLLPQPKAFFKSPPKIEVGSVFGGLAILTDDVQSGADQIIKRPSPPTSGES--AGPRKLIGSDPDGFGIELIEYSDFSKDM 333
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7R9W4A9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4A9_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.510e-34 Identity = 88/231 (38.10%), Postives = 128/231 (55.41%), Query Frame = 3 Query: 381 PTSSPAIGDLFETQNQTRFAQHVVVNVPDM---DRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDS--PYEPEQPKNSVFMAFDGDSTGMLLI 1058 P +S A+G L E + Q + V+V D D ++F G ++LR R T++GFGPE LS+P F VS+F YGGH SI + KT +A + D+ G V Y+Q+ V YRIS++V +GG +L FG ++VV+P GL + + G DP MF+A+ +D++ A K + E LG + YP AR +EP QPKNSV+M+ S G+LL+ Sbjct: 96 PPASAAVGSLPEYADTNAVLQGITVDVADQSQQDAMVEFLKTGFDFKVLRRRQAGSVTETWLGFGPEQLSIPERFTLPVSSFAEYGGHASINIRYDAKTMDAFYKKGDNA---PGNNVAYLQVGVPQYRISQMVKSGGNILDAFGIVDVVSPCGLPMRGIIGISPDPIMFIALNCQDVQ-ATKTFYEQLGFVEQEYPYARPSKGLGQFEPPQPKNSVYMSPSKTSMGVLLL 322
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A1Z5KBT6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBT6_FISSO) HSP 1 Score: 143 bits (361), Expect = 1.690e-34 Identity = 83/242 (34.30%), Postives = 131/242 (54.13%), Query Frame = 3 Query: 387 SSPAIGDLFETQNQTRFAQHVVVNVPD---MDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIEL-------NALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDS--PYEPEQPKNSVFMAFDGDSTGMLLIPAGRNE 1076 S+ A+G L + N Q + + V D +D + F G Q+LR R+ T++GFGPE LS+P DF+P VS+ SYGGH SI + N L + G++ G + Y+Q+ V YRIS++V +GG +L +GY+ V++P GL + + G DP MFVA++ +++++ +Y + LG + YP AR +EP QP SV+MA + G+LL+P + + Sbjct: 42 STAAVGTLPDFANDNAILQGITIKVADQSQLDSMIQFLENGFECQVLRRRIRGPIEETWMGFGPEQLSIPDDFQPPVSSLASYGGHASIHIVYDKSITNPLYRVGDSTP---------PGENIAYLQLGVPEYRISQMVKSGGNILDAYGYVNVISPSGLPIRGIVGLVPDPIMFVAIRCTNVEESRAFYQQ-LGFVEQEYPYARPSKGMGQFEPPQPAKSVYMAPSANCMGVLLLPTQKRK 273
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7S4REZ5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4REZ5_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.930e-32 Identity = 84/230 (36.52%), Postives = 121/230 (52.61%), Query Frame = 3 Query: 396 AIGDLFETQNQTRFAQHVVVNVPD---MDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDSP--YEPEQPKNSVFMAFDGDSTGMLLIPAGR 1070 A+G L E Q + V+V D D + F +ILR RV T++GFGPE LS+P DF VS+F YGGH SI + K+ + +D G + Y+Q+ V YRIS +V NGG VL +G + VV+P GL + + G DP MFVA+ +++K++ +Y E LG + YP AR +EP QP S++MA G+LL+P+ + Sbjct: 80 AVGTLPEYATSNAILQGITVDVADKSQQDEMIAFLSNSFDFKILRRRVTGSVTDTWMGFGPEQLSIPSDFEIPVSSFAKYGGHASIHIRYDSKSLSPLYKRGEDA---PGDNIAYLQVGVPTYRISAMVKNGGNVLDAYGIVNVVSPSGLPMRGIVGIMPDPIMFVAINCKNVKESKAFY-EQLGFMEQEYPYARPSKGTGQFEPPQPPKSIYMAPSPSCMGVLLLPSTK 305
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7S3K077_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K077_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.300e-31 Identity = 80/237 (33.76%), Postives = 127/237 (53.59%), Query Frame = 3 Query: 408 LFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGER-RDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARV---KDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEAINVGSVYSK 1106 L E+ A+ + + VP++ DF+ K LGMQ R T FGP +L PP F PG+STF+ GGHF+I L ++ A+ I YIQ A+ N R SK+++ GG + +G ++V+APG + +L G+ RD MF++++V D+ ++ +Y LG + YP AR ++SP++P P+NSV++ DS G+LL+P + +GS + K Sbjct: 57 LVESAQCQVLARELRIRVPNVAVTGDFFEKALGMQ--------RVGTQLFAFGPTSLERPPSFFPGISTFDQDGGHFAIRLEEGAESTFAQSIS-------------YIQFALPNLRASKIISYGGIINEAYGVVDVLAPGNVPCRLLLGDEVRDRTMFLSLRVTDLSASLSFYQN-LGFHKAPYPRARPPTNEESPFDPNPPRNSVYLTPCDDSFGILLVPTPTPFRLALGSAFKK 271 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9725.2.1 >prot_C-tenellus_contig9725.2.1 ID=prot_C-tenellus_contig9725.2.1|Name=mRNA_C-tenellus_contig9725.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=411bp MNPPCHYQTLNTRHQSHIVAFMMDIGWCKRATGVSLALLSLSSICSHVAAback to top mRNA from alignment at C-tenellus_contig9725:697..2559- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9725.2.1 ID=mRNA_C-tenellus_contig9725.2.1|Name=mRNA_C-tenellus_contig9725.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1863bp|location=Sequence derived from alignment at C-tenellus_contig9725:697..2559- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9725:697..2559- >mRNA_C-tenellus_contig9725.2.1 ID=mRNA_C-tenellus_contig9725.2.1|Name=mRNA_C-tenellus_contig9725.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1233bp|location=Sequence derived from alignment at C-tenellus_contig9725:697..2559- (Choristocarpus tenellus KU2346)back to top |