mRNA_C-tenellus_contig9725.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9725.2.1
Unique NamemRNA_C-tenellus_contig9725.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.420e-112
Identity = 186/335 (55.52%), Postives = 241/335 (71.94%), Query Frame = 3
Query:  303 GEEPSSRADFGKFSAAALLGVTLVSS---------PTSSPAIGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKK-TGNAEDIEAD-DVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEAINVGSVYSKLAILADGVEQIGERIGASF-VGKAPGVGTRVAVTEDPDGYGIALVEYEDWVKELPK 1271
            G EP+ R DF + SAA L G +   +         P+++ AIGDL+E ++Q RFAQH  V VPDM  AL FYV G+GM+++RTR     NTT VGFGPEAL VPP F  GVS+ N YGGHF++ELN+ K+  G AED E D D FYD G GVQ++QIAVD+YRIS+VV  GG + SG+GYL+V+APGGLRL +LSG RRDPPMF+AVKV+DMK++++WYT+V GM++  +P AR   SP+EPEQP  SVFMA++G++ G++LIPA + + IN GSV S +A+LA+ VE+I E +G    V  A G G  VAV  DPDGYG+  VEY DW  +LP+
Sbjct:   76 GAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVS-VAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVA-DPDGYGVKFVEYSDWRGQLPR 408          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA)

HSP 1 Score: 320 bits (820), Expect = 1.250e-100
Identity = 173/312 (55.45%), Postives = 217/312 (69.55%), Query Frame = 3
Query:  348 AALLGVTLVSSPTSSPAIGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRV--VERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIEL-NALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLAR-VKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEA--INVGSVYSKLAILADGVEQIGERIGASFVGKAPGVGTRVAVTEDPDGYGIALVEYEDWVKEL 1265
            A+   V +  SP    AIG+L ET +Q RF QH VVNVPD++ A+ FY +GLGM+++R+R      TNTTFV +GPE L+VP D+ PGVS+F +YGGHFS+EL   L    + E       FYD G GVQYIQIAVD YRISKV+A GG V+  FGY      GGL++N+ SG RRDP MFVA+KV D+KK+++WYT+VLGMSQ  YP AR   DS +EP+QPK SVFM +D D +G+LLIP  + +   I VGS YSKLA+LA  VE  G+R+GA + GKAPG  T VAV  DPDGY   LVEY+D+ +EL
Sbjct:   79 ASACAVLVAGSPEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGEL-----PFYDPGNGVQYIQIAVDTYRISKVIAAGGEVI--FGY------GGLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVGAMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA)

HSP 1 Score: 264 bits (675), Expect = 2.810e-79
Identity = 146/323 (45.20%), Postives = 205/323 (63.47%), Query Frame = 3
Query:  348 AALLGVTLV----SSPTSSPAIGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEA---INVGSVYSKLAILADGVEQIGER---------IGASFVGKAPGVGTRVAVTEDP-DGYGIALVEYEDWVKEL 1265
            A +LG ++     S P ++ AIG+L E  +  RF QH+V+NVPDM  AL FY+ GL MQ+LR+R+V   N+TFVG+GPE L  P  + PGVS+F+ YG HF++ELN + KT      E D    D G    Y+Q+AV + R+SK+   GG + S +G++ V +PGGLR  ++ G RRDP M +A+ V D++KA  +Y   LGM +  YPL+R+ +S YEP+QPK S F+AF+ D  G+LL+P  + EA   + +G V  KLAIL  G + +G+          +   F G+APG+GT+VAVT+DP  G G+ LVE ED  KEL
Sbjct:   40 AGVLGSSITGAFPSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKTE-----EGDTPVLDPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAIL--GTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTQDPVTGLGVVLVEAEDLEKEL 355          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC)

HSP 1 Score: 256 bits (655), Expect = 7.400e-77
Identity = 140/303 (46.20%), Postives = 191/303 (63.04%), Query Frame = 3
Query:  399 IGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRV--VERTNTTFVGFGPEALS---VPPDFRPGVSTFNSYGGHFSIEL--NALKKTGNAEDIEADDVF--YDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVK-DSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEA----INVGSVYSKLAILADGVEQIGERIGASFVGKAPGVGTRVAVTEDPDGYGIALVEYEDWVKEL 1265
            +G L ETQN  R+ QH VVNVP MD AL+FY +GLGM+++RTR    +  N TFVG+GPE L    V   FRPG+S++N YG HF++EL    +     ++D +A  V   Y+ G GVQ++QIA+   R+S++   GG +   +G++EV APGGL L I+ GERRDP MF    V+D+  A  +Y   LGM +L Y  AR   DSP EP+QP+ S +M +  D+ G+LL+   +  A    I VGSV+ KLAIL+  V + G  + A F G  PG+GT VA  +D  GYG+ LVEY+D+ KEL
Sbjct:    1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA)

HSP 1 Score: 248 bits (632), Expect = 4.320e-74
Identity = 130/270 (48.15%), Postives = 182/270 (67.41%), Query Frame = 3
Query:  342 SAAALLGVTLVSSPTSSP--AIGDLFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEAINVGSVYSKLAILADGVEQIGE 1145
            S++A+LG   +S   S P  +IG+L E  +  +F QH+VV V DMD AL+F +KGL M +LRTR+V+  N TFVG+GPE LS P DF PGVS+F  YGGHFS+EL  +  T   E  +      + GT +QYIQ+A  N    K++  GG +  G+GY +V+AP GL   +   + RDP  ++A+KV+DMKK+I +Y +VLGM +L+Y + RVKDS +EP QPK SV M ++ +S  +LLIPA R + I VG+V++KLAI+ +GVE IG+
Sbjct:   11 SSSAILGSVALSQGLSQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLEL--VSPTTPLEQRKP--FANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGK 276          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7S2G3S5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3S5_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.020e-61
Identity = 123/289 (42.56%), Postives = 177/289 (61.25%), Query Frame = 3
Query:  432 RFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERR-DPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVK-DSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRN-----EAINVGSVYSKLAILAD----GVEQIGERIGASFVGKAPGVGTRVAVTEDPDGYGIALVEYEDWVKEL 1265
            R   H VVN  DMD  L F + GL M++L T +    NTTFVGFGP  L+VPP F PGVS++  YGGHFS++L +       E ++     ++ G G++YI++ V  YRISK++  GGT+ S +G+  V APGGLR  ++ G++  DP MF A+ V+D+K A  +YT+ LGM +L  P AR   DSP+EP  PK SV++++  D+ G++L+P  +        I VGSV+  LAIL D    G +QI +R      G++   G R  +  DPDG+GI L+EY D+ K++
Sbjct:   52 RVTTHAVVNTGDMDAMLQFLLLGLNMEVLDTTMDGTVNTTFVGFGPRQLTVPPQFIPGVSSWEEYGGHFSLKLVSDTSERTKEQVQV----FEPGNGLEYIKLGVPRYRISKLIEYGGTLESSYGFTMVRAPGGLRFQVVLGDQVIDPMMFAALNVKDIKAAEAFYTQ-LGMRRLPSPHARAALDSPFEPSPPKGSVYLSYAPDTFGVMLLPQPKAFFKSPPKIEVGSVFGGLAILTDDVQSGADQIIKRPSPPTSGES--AGPRKLIGSDPDGFGIELIEYSDFSKDM 333          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7R9W4A9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4A9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.510e-34
Identity = 88/231 (38.10%), Postives = 128/231 (55.41%), Query Frame = 3
Query:  381 PTSSPAIGDLFETQNQTRFAQHVVVNVPDM---DRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDS--PYEPEQPKNSVFMAFDGDSTGMLLI 1058
            P +S A+G L E  +     Q + V+V D    D  ++F   G   ++LR R       T++GFGPE LS+P  F   VS+F  YGGH SI +    KT +A   + D+     G  V Y+Q+ V  YRIS++V +GG +L  FG ++VV+P GL +  + G   DP MF+A+  +D++ A K + E LG  +  YP AR       +EP QPKNSV+M+    S G+LL+
Sbjct:   96 PPASAAVGSLPEYADTNAVLQGITVDVADQSQQDAMVEFLKTGFDFKVLRRRQAGSVTETWLGFGPEQLSIPERFTLPVSSFAEYGGHASINIRYDAKTMDAFYKKGDNA---PGNNVAYLQVGVPQYRISQMVKSGGNILDAFGIVDVVSPCGLPMRGIIGISPDPIMFIALNCQDVQ-ATKTFYEQLGFVEQEYPYARPSKGLGQFEPPQPKNSVYMSPSKTSMGVLLL 322          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A1Z5KBT6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBT6_FISSO)

HSP 1 Score: 143 bits (361), Expect = 1.690e-34
Identity = 83/242 (34.30%), Postives = 131/242 (54.13%), Query Frame = 3
Query:  387 SSPAIGDLFETQNQTRFAQHVVVNVPD---MDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIEL-------NALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDS--PYEPEQPKNSVFMAFDGDSTGMLLIPAGRNE 1076
            S+ A+G L +  N     Q + + V D   +D  + F   G   Q+LR R+      T++GFGPE LS+P DF+P VS+  SYGGH SI +       N L + G++            G  + Y+Q+ V  YRIS++V +GG +L  +GY+ V++P GL +  + G   DP MFVA++  +++++  +Y + LG  +  YP AR       +EP QP  SV+MA   +  G+LL+P  + +
Sbjct:   42 STAAVGTLPDFANDNAILQGITIKVADQSQLDSMIQFLENGFECQVLRRRIRGPIEETWMGFGPEQLSIPDDFQPPVSSLASYGGHASIHIVYDKSITNPLYRVGDSTP---------PGENIAYLQLGVPEYRISQMVKSGGNILDAYGYVNVISPSGLPIRGIVGLVPDPIMFVAIRCTNVEESRAFYQQ-LGFVEQEYPYARPSKGMGQFEPPQPAKSVYMAPSANCMGVLLLPTQKRK 273          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7S4REZ5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4REZ5_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.930e-32
Identity = 84/230 (36.52%), Postives = 121/230 (52.61%), Query Frame = 3
Query:  396 AIGDLFETQNQTRFAQHVVVNVPD---MDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARVKDSP--YEPEQPKNSVFMAFDGDSTGMLLIPAGR 1070
            A+G L E        Q + V+V D    D  + F       +ILR RV      T++GFGPE LS+P DF   VS+F  YGGH SI +    K+ +      +D     G  + Y+Q+ V  YRIS +V NGG VL  +G + VV+P GL +  + G   DP MFVA+  +++K++  +Y E LG  +  YP AR       +EP QP  S++MA      G+LL+P+ +
Sbjct:   80 AVGTLPEYATSNAILQGITVDVADKSQQDEMIAFLSNSFDFKILRRRVTGSVTDTWMGFGPEQLSIPSDFEIPVSSFAKYGGHASIHIRYDSKSLSPLYKRGEDA---PGDNIAYLQVGVPTYRISAMVKNGGNVLDAYGIVNVVSPSGLPMRGIVGIMPDPIMFVAINCKNVKESKAFY-EQLGFMEQEYPYARPSKGTGQFEPPQPPKSIYMAPSPSCMGVLLLPSTK 305          
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Match: A0A7S3K077_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K077_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.300e-31
Identity = 80/237 (33.76%), Postives = 127/237 (53.59%), Query Frame = 3
Query:  408 LFETQNQTRFAQHVVVNVPDMDRALDFYVKGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSIELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVLSGFGYLEVVAPGGLRLNILSGER-RDPPMFVAVKVRDMKKAIKWYTEVLGMSQLAYPLARV---KDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEAINVGSVYSK 1106
            L E+      A+ + + VP++    DF+ K LGMQ        R  T    FGP +L  PP F PG+STF+  GGHF+I L    ++  A+ I              YIQ A+ N R SK+++ GG +   +G ++V+APG +   +L G+  RD  MF++++V D+  ++ +Y   LG  +  YP AR    ++SP++P  P+NSV++    DS G+LL+P      + +GS + K
Sbjct:   57 LVESAQCQVLARELRIRVPNVAVTGDFFEKALGMQ--------RVGTQLFAFGPTSLERPPSFFPGISTFDQDGGHFAIRLEEGAESTFAQSIS-------------YIQFALPNLRASKIISYGGIINEAYGVVDVLAPGNVPCRLLLGDEVRDRTMFLSLRVTDLSASLSFYQN-LGFHKAPYPRARPPTNEESPFDPNPPRNSVYLTPCDDSFGILLVPTPTPFRLALGSAFKK 271          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9725.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LU98_ECTSI1.420e-11255.52VOC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YIX3_9STRA1.250e-10055.45VOC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D405_9STRA2.810e-7945.20Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A0G4EHT2_VITBC7.400e-7746.20VOC domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A7S2UZ58_9STRA4.320e-7448.15Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2G3S5_9STRA1.020e-6142.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9W4A9_9STRA1.510e-3438.10Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A1Z5KBT6_FISSO1.690e-3434.30Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S4REZ5_9STRA1.930e-3236.52Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3K077_9STRA5.300e-3133.76Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9725contigC-tenellus_contig9725:697..2559 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LU98
PFAMsGlyoxalase
Model size1863
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.85e-116
EggNOG OGsCOG0346@1|root,KOG2943@2759|Eukaryota
Descriptionmethylglyoxal metabolic process
Cds size1233
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790198.1767285-UTR-C-tenellus_contig9725:696..12821680790198.1767285-UTR-C-tenellus_contig9725:696..1282Choristocarpus tenellus KU2346UTRC-tenellus_contig9725 697..1282 -
1680790198.2057118-UTR-C-tenellus_contig9725:2515..25591680790198.2057118-UTR-C-tenellus_contig9725:2515..2559Choristocarpus tenellus KU2346UTRC-tenellus_contig9725 2516..2559 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790198.194726-CDS-C-tenellus_contig9725:1282..25151680790198.194726-CDS-C-tenellus_contig9725:1282..2515Choristocarpus tenellus KU2346CDSC-tenellus_contig9725 1283..2515 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9725.2.1prot_C-tenellus_contig9725.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9725 1283..2515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9725.2.1

>prot_C-tenellus_contig9725.2.1 ID=prot_C-tenellus_contig9725.2.1|Name=mRNA_C-tenellus_contig9725.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=411bp
MNPPCHYQTLNTRHQSHIVAFMMDIGWCKRATGVSLALLSLSSICSHVAA
FVGAFPRFRHAPLRAISYPLGLVETGTVMKMDLTNMGEEPSSRADFGKFS
AAALLGVTLVSSPTSSPAIGDLFETQNQTRFAQHVVVNVPDMDRALDFYV
KGLGMQILRTRVVERTNTTFVGFGPEALSVPPDFRPGVSTFNSYGGHFSI
ELNALKKTGNAEDIEADDVFYDAGTGVQYIQIAVDNYRISKVVANGGTVL
SGFGYLEVVAPGGLRLNILSGERRDPPMFVAVKVRDMKKAIKWYTEVLGM
SQLAYPLARVKDSPYEPEQPKNSVFMAFDGDSTGMLLIPAGRNEAINVGS
VYSKLAILADGVEQIGERIGASFVGKAPGVGTRVAVTEDPDGYGIALVEY
EDWVKELPKF*
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mRNA from alignment at C-tenellus_contig9725:697..2559-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9725.2.1 ID=mRNA_C-tenellus_contig9725.2.1|Name=mRNA_C-tenellus_contig9725.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1863bp|location=Sequence derived from alignment at C-tenellus_contig9725:697..2559- (Choristocarpus tenellus KU2346)
GTTCGGATAGTTAGAGCATAGTCAAGTACTATAATGGAAAAGATATGAAT CCTCCTTGCCACTACCAAACCCTTAACACCAGACATCAATCACATATTGT TGCGTTCATGATGGATATTGGTTGGTGCAAGCGAGCAACGGGGGTATCCC TGGCCTTGTTGTCTTTATCGTCAATATGCAGTCATGTTGCAGCTTTTGTC GGTGCGTTCCCGAGGTTCCGACATGCTCCTCTGAGAGCGATCTCGTACCC ACTTGGGCTAGTAGAAACTGGGACAGTCATGAAGATGGACCTTACTAACA TGGGAGAGGAGCCATCGTCAAGAGCAGACTTTGGGAAGTTTTCCGCCGCA GCTCTCCTTGGTGTCACTTTGGTGTCGTCTCCTACCTCATCACCTGCCAT CGGCGACCTTTTCGAAACCCAAAATCAAACTCGCTTCGCCCAGCACGTGG TGGTCAACGTACCCGACATGGATAGGGCGCTCGACTTCTACGTCAAGGGC CTCGGAATGCAGATCCTTAGGACACGTGTTGTTGAACGCACTAATACCAC GTTTGTGGGGTTCGGTCCGGAGGCCCTCAGTGTCCCGCCCGACTTTCGAC CTGGTGTTTCCACCTTCAACTCGTATGGTGGCCACTTCTCCATTGAGCTC AACGCCCTCAAGAAGACAGGAAACGCTGAGGACATTGAGGCAGATGACGT GTTCTATGACGCCGGAACTGGGGTACAGTACATTCAGATAGCTGTTGATA ATTATCGCATCTCGAAAGTTGTTGCAAATGGAGGCACTGTCTTGTCTGGC TTCGGATACTTGGAGGTGGTGGCACCAGGGGGGCTAAGACTGAACATTTT AAGCGGGGAACGGCGGGATCCACCCATGTTCGTGGCTGTCAAGGTTCGTG ACATGAAGAAAGCTATAAAGTGGTACACAGAGGTGTTGGGTATGTCACAA CTGGCATACCCCTTGGCACGTGTGAAGGACTCACCCTACGAGCCTGAACA GCCAAAGAACAGCGTCTTCATGGCATTCGATGGGGACTCTACTGGGATGC TTCTCATACCCGCTGGACGCAATGAAGCAATCAACGTGGGTAGTGTATAC TCGAAATTGGCAATCCTAGCGGATGGAGTGGAGCAGATAGGGGAGAGGAT TGGGGCCTCGTTTGTGGGGAAAGCACCAGGGGTGGGTACAAGGGTGGCCG TCACCGAGGATCCAGACGGATATGGGATTGCTCTGGTTGAATATGAGGAC TGGGTCAAGGAATTGCCAAAGTTTTGATTCTCTCGCTGGCAGGTAACTGA CATCAGGTTCCAGAGTCATTCTTCTCTCTTGGGGTTGACTTGCTGGGACT CAAGGTGCAAACTTACGTGCATGCTGGCAGTTTTCACAGTCAAGTGAAGT TGGAAGCTATATGTGTGATTACACGATTGATTTTTCGAGATGTGATCTTT GTTTTTACCCTGCTTGGTTAGAAATAGCCTGCCCTGTTCACTTTCAACCT CTTGATGTTGTATACAGTGGTACATTACTTTCACTATAGAAAGGTCACCA CTGGAGATTAACATCGTGATCAATATACCCACCTGTCACAGCTTTCATTA CACTAGTGTTTGCATCGTCTTCACCTTGCAGGGGAACCTTAAAAAACATT CTTGATTTGTAGAGAAATCTGGAGATTGATCAGCACGCCGTTCAGAGGTT AAGCATGCCAGCTTTCACTTGAGCCAAACAAACGTGTTTCGTTTATTGTC CTGAATCATTTGAATCTTCCCTACAATAGAAATACTTAAATTTGAAGAAA TTGAAAATCTGAAAATGTTCCTGGCATAATCAGCTTTCAAACGCCCCTCC AGTTGATCTCTCT
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Coding sequence (CDS) from alignment at C-tenellus_contig9725:697..2559-

>mRNA_C-tenellus_contig9725.2.1 ID=mRNA_C-tenellus_contig9725.2.1|Name=mRNA_C-tenellus_contig9725.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1233bp|location=Sequence derived from alignment at C-tenellus_contig9725:697..2559- (Choristocarpus tenellus KU2346)
ATGAATCCTCCTTGCCACTACCAAACCCTTAACACCAGACATCAATCACA
TATTGTTGCGTTCATGATGGATATTGGTTGGTGCAAGCGAGCAACGGGGG
TATCCCTGGCCTTGTTGTCTTTATCGTCAATATGCAGTCATGTTGCAGCT
TTTGTCGGTGCGTTCCCGAGGTTCCGACATGCTCCTCTGAGAGCGATCTC
GTACCCACTTGGGCTAGTAGAAACTGGGACAGTCATGAAGATGGACCTTA
CTAACATGGGAGAGGAGCCATCGTCAAGAGCAGACTTTGGGAAGTTTTCC
GCCGCAGCTCTCCTTGGTGTCACTTTGGTGTCGTCTCCTACCTCATCACC
TGCCATCGGCGACCTTTTCGAAACCCAAAATCAAACTCGCTTCGCCCAGC
ACGTGGTGGTCAACGTACCCGACATGGATAGGGCGCTCGACTTCTACGTC
AAGGGCCTCGGAATGCAGATCCTTAGGACACGTGTTGTTGAACGCACTAA
TACCACGTTTGTGGGGTTCGGTCCGGAGGCCCTCAGTGTCCCGCCCGACT
TTCGACCTGGTGTTTCCACCTTCAACTCGTATGGTGGCCACTTCTCCATT
GAGCTCAACGCCCTCAAGAAGACAGGAAACGCTGAGGACATTGAGGCAGA
TGACGTGTTCTATGACGCCGGAACTGGGGTACAGTACATTCAGATAGCTG
TTGATAATTATCGCATCTCGAAAGTTGTTGCAAATGGAGGCACTGTCTTG
TCTGGCTTCGGATACTTGGAGGTGGTGGCACCAGGGGGGCTAAGACTGAA
CATTTTAAGCGGGGAACGGCGGGATCCACCCATGTTCGTGGCTGTCAAGG
TTCGTGACATGAAGAAAGCTATAAAGTGGTACACAGAGGTGTTGGGTATG
TCACAACTGGCATACCCCTTGGCACGTGTGAAGGACTCACCCTACGAGCC
TGAACAGCCAAAGAACAGCGTCTTCATGGCATTCGATGGGGACTCTACTG
GGATGCTTCTCATACCCGCTGGACGCAATGAAGCAATCAACGTGGGTAGT
GTATACTCGAAATTGGCAATCCTAGCGGATGGAGTGGAGCAGATAGGGGA
GAGGATTGGGGCCTCGTTTGTGGGGAAAGCACCAGGGGTGGGTACAAGGG
TGGCCGTCACCGAGGATCCAGACGGATATGGGATTGCTCTGGTTGAATAT
GAGGACTGGGTCAAGGAATTGCCAAAGTTTTGA
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