mRNA_C-tenellus_contig9716.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: D7FR39_ECTSI (Mx1, Mx-like dynamin-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR39_ECTSI) HSP 1 Score: 407 bits (1045), Expect = 1.280e-131 Identity = 213/245 (86.94%), Postives = 229/245 (93.47%), Query Frame = 1 Query: 10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAERPDGG 744 QVFYGFMIQNVE+WRPAVESCR+QA ANAALTVASLLVETLA+QFPRLC+AVRDALASLVEQLAEEVS RID+IFQKESDPFTTNEGMLEVINTIRFRHFDKAV+DA+DEAG+ PE++EALK VME+L EWYM NHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMT+EQDFVVKLLG VESELFLLTN VEELF+EDTSVVEKRRSLQAKKQRL+KGLE+LMRMAP+LVA RP GG Sbjct: 460 QVFYGFMIQNVETWRPAVESCRSQA---ANAALTVASLLVETLALQFPRLCSAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEALKGAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSEVEELFVEDTSVVEKRRSLQAKKQRLLKGLETLMRMAPDLVATRPGGG 701
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A836CJ76_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ76_9STRA) HSP 1 Score: 326 bits (835), Expect = 4.540e-104 Identity = 175/265 (66.04%), Postives = 207/265 (78.11%), Query Frame = 1 Query: 7 VQVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLM--------------------RMAPELVAERPDG 741 +QVFYGFM+QNVE+WRPAVE CR+Q ANA L++ASLL++ LAVQFPRLC A+RDA++ LVEQLA+EVS RI++IFQKESDPFTTNEGML+VINTIRFR FD A+++AL AG++P AL + E LG WYM NHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMT+EQDFVV+LLG ESELFLL + VEELF+ED SV+E+RR+LQAK+ RL +G+ESL RMAPE+VAE P G Sbjct: 431 LQVFYGFMVQNVETWRPAVEICRSQV---ANATLSIASLLIQALAVQFPRLCGAIRDAVSGLVEQLADEVSTRIEEIFQKESDPFTTNEGMLDVINTIRFRLFDVALEEALATAGEKPAESNALLATLRESLGAWYMKNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVRLLGLAESELFLLAARLENVEELFVEDASVMERRRTLQAKRDRLNRGMESLRSFLLALIAAVAVSCCCAHGDRMAPEVVAEPPPG 692
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A7S3UVE7_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVE7_HETAK) HSP 1 Score: 199 bits (505), Expect = 4.030e-59 Identity = 109/248 (43.95%), Postives = 156/248 (62.90%), Query Frame = 1 Query: 10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTN------HHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAERP 735 QVFYGFM QNV++WRPAVE C + + AA TVA+LL E L QFP LC A+ + +L ++V +D +F KES+PFTTNE ML++IN +RF+ FD A+ +A G + E + V+ +G +Y+ HGV N +M LLQAYWN+AT+R++DNVCMTLE FV +LL +E+ FLL + V +LF+ED ++ +RR+L K++RL + L+ + R AP++VA P Sbjct: 45 QVFYGFMAQNVQTWRPAVERCCLR---TFEAASTVAALLAEALVPQFPNLCRALTRLAEEAIGELQQDVLEEVDHLFAKESEPFTTNESMLDLINKLRFQKFDSALAEAFGRLGQGDRTAEQMAAAVLTGMGRFYLDAHGVAANGNPAEMAILLQAYWNIATRRVIDNVCMTLEATFVARLLALLENRTFLLGSGPGGEAEAGGVAQLFVEDEALARRRRALADKRERLERALDFVNRAAPDVVAAPP 289
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A8J2SEQ3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEQ3_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.700e-56 Identity = 114/254 (44.88%), Postives = 156/254 (61.42%), Query Frame = 1 Query: 10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEA------GDQPESLEALKMC-VMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKV------VEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAER 732 QVFYGFM++N+E WRP VE CR Q + + V+ L+E LA +P L + +R + +++E+ + V ++DD+F KESDP+TTNE MLE++N IR ++FD A++ LD GD E A V +LG+WYM HGV T + VEDMCTLL+AYW+VATKRLVDNVCMTLE DF L +E FL V +E LFL+D VV++R++ KK R+ L++L +VAER Sbjct: 441 QVFYGFMVKNIEEWRPFVEDCRAQYVATT---IRVSDELLEALAPTYPSLVSEIRQLVTTILEEAGDRVQRKLDDVFAKESDPYTTNESMLELVNQIRMKNFDIALRSVLDSVPPSALVGDNEEKKSAAAAAHVKRKLGQWYMATHGVNTASKVEDMCTLLEAYWDVATKRLVDNVCMTLEHDFANFSLKKLEESCFLFAADAGVPEKTDLLERLFLQDPRVVQQRKAALEKKGRMEAALDALGESGLRVVAER 691
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A7S3NNK1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNK1_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.320e-47 Identity = 102/255 (40.00%), Postives = 145/255 (56.86%), Query Frame = 1 Query: 10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEA------GDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEE------LFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAERPD 738 QVFYGFM+QN+E WRP VE CR +A A V+ L + LA +P L +R ++++ + V+ ++DD+F KESDP+TTNE MLE+IN IR ++F+ A++ + A + K V +LG WYM HGV T + VEDMCTLLQAYW+VATKRLVD L + E+ LF ED ++VE RR+ +AK++RL + LE++ + AP++VA RP+ Sbjct: 166 QVFYGFMVQNIEQWRPWVEDCRQHYVAAARA---VSDNLAQALAPTYPALAVEIRQRAHGIMDRYGDVVAEKLDDVFAKESDPYTTNESMLELINRIRQKNFELALKAVISSAPPGSMMASNQNAKNTAKTHVKHQLGRWYMQTHGVNTTSKVEDMCTLLQAYWDVATKRLVDXXXXXXXXXXXXXXXXXXXXXXXLFAAEYSNPEKELDLQRLFREDPAIVELRRAAKAKEKRLTQALEAIKQFAPDVVAARPN 417
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: D8LJA2_ECTSI (Mgm1 homolog, dynamin-related GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA2_ECTSI) HSP 1 Score: 161 bits (408), Expect = 1.160e-41 Identity = 100/270 (37.04%), Postives = 146/270 (54.07%), Query Frame = 1 Query: 10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPES------LEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEE-------------------------LFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVA 726 Q F+ FM+Q VE +RP VE+CR +L N+ L +A LV +A Q+PRL A + + S V +AEE+ +D +F KE +PFT N+ ++E IN +RF FD+ + L EAGD P + + LK V LG+W+ HG + VEDM T+LQAYW V +KR+VDN CM LE F +++ +E++L LT + +E +F ED +VEKR L ++QRL L + AP+++A Sbjct: 453 QFFFIFMLQQVEKFRPVVETCR---NLCCNSLLNIAVSLVSEVAPQYPRLQQAFQGIIESTVPNMAEELQPELDQLFDKEKNPFTENQDLVEAINQVRFERFDRVLHQVLVEAGDGPPNGGDASDVTPLKEWVTYNLGQWFRFAHGANPTSKVEDMSTILQAYWRVTSKRVVDNACMLLETSFFGQVVDRLETQLLALTQ--AITQEEGQDKAEAKAAAGQEGMGWQQPRLGIFNEDAVLVEKRSFLLMRQQRLKAALGKIENFAPDVLA 717
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A836CBT5_9STRA (Mgm1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT5_9STRA) HSP 1 Score: 156 bits (394), Expect = 8.640e-40 Identity = 91/251 (36.25%), Postives = 139/251 (55.38%), Query Frame = 1 Query: 10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQP----------ESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELF--LLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVA 726 Q FY FM+Q VE +RPAVE+CR++ S L V L + +A Q+P L ++ + VE+ E + +D +F KE +PFT N+ ++E IN +RF FD+ +Q L EAGD P L +L V LG+WY +HG + VEDM +LQAYW V +KR+ DN CM LE F+ + +E+ L T + + ED ++VE+R L++++ R+ L+ + +AP++VA Sbjct: 449 QFFYIFMLQQVERFRPAVEACRSEIYASV---LGVGRGLAQAIAPQYPLLVETMQSLVEQTVEEATEALLPELDMVFDKERNPFTENQDLVEAINRVRFERFDRVMQQVLLEAGDAPPPAEKGAPKGSELNSLHDWVSFNLGQWYRYSHGANPTSKVEDMSAILQAYWRVTSKRVCDNACMLLEASFLAAVPDALEAALLSHAQTLDARALAAALQEDAAIVERRALLESRRDRVAAALDRIAAVAPDVVA 696
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A7S2W2A1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2A1_9STRA) HSP 1 Score: 145 bits (366), Expect = 4.470e-36 Identity = 86/244 (35.25%), Postives = 142/244 (58.20%), Query Frame = 1 Query: 16 FYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALD----EAGDQP-ESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELF--LLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVA 726 FY FM+ +E WR V++ + + + L V++ + L Q+P + V + E+ V RID+ F++E+DPF +N+ + I +R FDKA++ A+ +AGD + ++ L+ ++++LG WYM NHGV + + +EDM T+L AYW +++KRL +N CM+ E + +L +ESEL + T VV+ELF E +VE+R L+ KK R ++S+ R+AP+LVA Sbjct: 434 FYSFMVTKIEDWRAPVDTLKNEVF---DLILAVSTSIFTLLCPQYPEIGKLVSMVVQGWAERHMVAVERRIDEAFKQEADPFVSNDDLGIEIIRVRGERFDKAIERAMKLASTDAGDGTIKDMDKLEARILDKLGFWYMANHGVSSASLIEDMLTVLMAYWALSSKRLTENTCMSFEAHVLQRLSEDIESELLTAVQTQPEDVVKELFNEPKHMVERRTLLKTKKARFDSAMDSITRLAPDLVA 674
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A6V2RT65_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RT65_HETAK) HSP 1 Score: 143 bits (361), Expect = 1.820e-35 Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 1 Query: 1 MCVQVFYGFMIQNVESWR-PAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIK 684 M Q FY FM Q +E WR PA + SL L VAS L E +AVQ+P L V+ A ++E+ + + +D++ +E DPFT N+ + + +N IR+ F+ AV A + A +E++K + L WY HGV + +N EDM +L+AYW +A++R VDNVCM +++ + L G ++ E ++ + + + F ED + +RR L +K++RL+K Sbjct: 433 MSPQSFYMFMAQYLEQWRGPAKVAVSEMRSLC----LEVASKLTEIIAVQYPALREGVKKVAAVVLEETMTKALDLVDELLDREKDPFTANDFLAQHVNKIRYDRFELAVVRAFETAAATGTGIESVKQGAAQELQRWYRETHGVNSSSNAEDMSAILEAYWTLASRRFVDNVCMGIDRTMLNSLAGRIQEECYMFVHDEEKLAAFFEEDARLAHRRRELLSKQERLMK 657
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A6V1N3L6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N3L6_HETAK) HSP 1 Score: 143 bits (361), Expect = 1.830e-35 Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 1 Query: 1 MCVQVFYGFMIQNVESWR-PAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIK 684 M Q FY FM Q +E WR PA + SL L VAS L E +AVQ+P L V+ A ++E+ + + +D++ +E DPFT N+ + + +N IR+ F+ AV A + A +E++K + L WY HGV + +N EDM +L+AYW +A++R VDNVCM +++ + L G ++ E ++ + + + F ED + +RR L +K++RL+K Sbjct: 436 MSPQSFYMFMAQYLEQWRGPAKVAVSEMRSLC----LEVASKLTEIIAVQYPALREGVKKVAAVVLEETMTKALDLVDELLDREKDPFTANDFLAQHVNKIRYDRFELAVVRAFETAAATGTGIESVKQGAAQELQRWYRETHGVNSSSNAEDMSAILEAYWTLASRRFVDNVCMGIDRTMLNSLAGRIQEECYMFVHDEEKLAAFFEEDARLAHRRRELLSKQERLMK 660 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9716.1.1 >prot_C-tenellus_contig9716.1.1 ID=prot_C-tenellus_contig9716.1.1|Name=mRNA_C-tenellus_contig9716.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=248bp MCVQVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFback to top mRNA from alignment at C-tenellus_contig9716:610..5744- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9716.1.1 ID=mRNA_C-tenellus_contig9716.1.1|Name=mRNA_C-tenellus_contig9716.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5135bp|location=Sequence derived from alignment at C-tenellus_contig9716:610..5744- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9716:610..5744- >mRNA_C-tenellus_contig9716.1.1 ID=mRNA_C-tenellus_contig9716.1.1|Name=mRNA_C-tenellus_contig9716.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=744bp|location=Sequence derived from alignment at C-tenellus_contig9716:610..5744- (Choristocarpus tenellus KU2346)back to top |