mRNA_C-tenellus_contig9716.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9716.1.1
Unique NamemRNA_C-tenellus_contig9716.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: D7FR39_ECTSI (Mx1, Mx-like dynamin-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR39_ECTSI)

HSP 1 Score: 407 bits (1045), Expect = 1.280e-131
Identity = 213/245 (86.94%), Postives = 229/245 (93.47%), Query Frame = 1
Query:   10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAERPDGG 744
            QVFYGFMIQNVE+WRPAVESCR+QA   ANAALTVASLLVETLA+QFPRLC+AVRDALASLVEQLAEEVS RID+IFQKESDPFTTNEGMLEVINTIRFRHFDKAV+DA+DEAG+ PE++EALK  VME+L EWYM NHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMT+EQDFVVKLLG VESELFLLTN    VEELF+EDTSVVEKRRSLQAKKQRL+KGLE+LMRMAP+LVA RP GG
Sbjct:  460 QVFYGFMIQNVETWRPAVESCRSQA---ANAALTVASLLVETLALQFPRLCSAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEALKGAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSEVEELFVEDTSVVEKRRSLQAKKQRLLKGLETLMRMAPDLVATRPGGG 701          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A836CJ76_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ76_9STRA)

HSP 1 Score: 326 bits (835), Expect = 4.540e-104
Identity = 175/265 (66.04%), Postives = 207/265 (78.11%), Query Frame = 1
Query:    7 VQVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLM--------------------RMAPELVAERPDG 741
            +QVFYGFM+QNVE+WRPAVE CR+Q    ANA L++ASLL++ LAVQFPRLC A+RDA++ LVEQLA+EVS RI++IFQKESDPFTTNEGML+VINTIRFR FD A+++AL  AG++P    AL   + E LG WYM NHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMT+EQDFVV+LLG  ESELFLL    + VEELF+ED SV+E+RR+LQAK+ RL +G+ESL                     RMAPE+VAE P G
Sbjct:  431 LQVFYGFMVQNVETWRPAVEICRSQV---ANATLSIASLLIQALAVQFPRLCGAIRDAVSGLVEQLADEVSTRIEEIFQKESDPFTTNEGMLDVINTIRFRLFDVALEEALATAGEKPAESNALLATLRESLGAWYMKNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVRLLGLAESELFLLAARLENVEELFVEDASVMERRRTLQAKRDRLNRGMESLRSFLLALIAAVAVSCCCAHGDRMAPEVVAEPPPG 692          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A7S3UVE7_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVE7_HETAK)

HSP 1 Score: 199 bits (505), Expect = 4.030e-59
Identity = 109/248 (43.95%), Postives = 156/248 (62.90%), Query Frame = 1
Query:   10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTN------HHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAERP 735
            QVFYGFM QNV++WRPAVE C  +   +  AA TVA+LL E L  QFP LC A+       + +L ++V   +D +F KES+PFTTNE ML++IN +RF+ FD A+ +A    G    + E +   V+  +G +Y+  HGV    N  +M  LLQAYWN+AT+R++DNVCMTLE  FV +LL  +E+  FLL +          V +LF+ED ++  +RR+L  K++RL + L+ + R AP++VA  P
Sbjct:   45 QVFYGFMAQNVQTWRPAVERCCLR---TFEAASTVAALLAEALVPQFPNLCRALTRLAEEAIGELQQDVLEEVDHLFAKESEPFTTNESMLDLINKLRFQKFDSALAEAFGRLGQGDRTAEQMAAAVLTGMGRFYLDAHGVAANGNPAEMAILLQAYWNIATRRVIDNVCMTLEATFVARLLALLENRTFLLGSGPGGEAEAGGVAQLFVEDEALARRRRALADKRERLERALDFVNRAAPDVVAAPP 289          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A8J2SEQ3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEQ3_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.700e-56
Identity = 114/254 (44.88%), Postives = 156/254 (61.42%), Query Frame = 1
Query:   10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEA------GDQPESLEALKMC-VMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKV------VEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAER 732
            QVFYGFM++N+E WRP VE CR Q   +    + V+  L+E LA  +P L + +R  + +++E+  + V  ++DD+F KESDP+TTNE MLE++N IR ++FD A++  LD        GD  E   A     V  +LG+WYM  HGV T + VEDMCTLL+AYW+VATKRLVDNVCMTLE DF    L  +E   FL      V      +E LFL+D  VV++R++   KK R+   L++L      +VAER
Sbjct:  441 QVFYGFMVKNIEEWRPFVEDCRAQYVATT---IRVSDELLEALAPTYPSLVSEIRQLVTTILEEAGDRVQRKLDDVFAKESDPYTTNESMLELVNQIRMKNFDIALRSVLDSVPPSALVGDNEEKKSAAAAAHVKRKLGQWYMATHGVNTASKVEDMCTLLEAYWDVATKRLVDNVCMTLEHDFANFSLKKLEESCFLFAADAGVPEKTDLLERLFLQDPRVVQQRKAALEKKGRMEAALDALGESGLRVVAER 691          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A7S3NNK1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNK1_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.320e-47
Identity = 102/255 (40.00%), Postives = 145/255 (56.86%), Query Frame = 1
Query:   10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEA------GDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEE------LFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAERPD 738
            QVFYGFM+QN+E WRP VE CR     +A A   V+  L + LA  +P L   +R     ++++  + V+ ++DD+F KESDP+TTNE MLE+IN IR ++F+ A++  +  A           +    K  V  +LG WYM  HGV T + VEDMCTLLQAYW+VATKRLVD                       L    +   E+      LF ED ++VE RR+ +AK++RL + LE++ + AP++VA RP+
Sbjct:  166 QVFYGFMVQNIEQWRPWVEDCRQHYVAAARA---VSDNLAQALAPTYPALAVEIRQRAHGIMDRYGDVVAEKLDDVFAKESDPYTTNESMLELINRIRQKNFELALKAVISSAPPGSMMASNQNAKNTAKTHVKHQLGRWYMQTHGVNTTSKVEDMCTLLQAYWDVATKRLVDXXXXXXXXXXXXXXXXXXXXXXXLFAAEYSNPEKELDLQRLFREDPAIVELRRAAKAKEKRLTQALEAIKQFAPDVVAARPN 417          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: D8LJA2_ECTSI (Mgm1 homolog, dynamin-related GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA2_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.160e-41
Identity = 100/270 (37.04%), Postives = 146/270 (54.07%), Query Frame = 1
Query:   10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPES------LEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEE-------------------------LFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVA 726
            Q F+ FM+Q VE +RP VE+CR   +L  N+ L +A  LV  +A Q+PRL  A +  + S V  +AEE+   +D +F KE +PFT N+ ++E IN +RF  FD+ +   L EAGD P +      +  LK  V   LG+W+   HG    + VEDM T+LQAYW V +KR+VDN CM LE  F  +++  +E++L  LT    + +E                         +F ED  +VEKR  L  ++QRL   L  +   AP+++A
Sbjct:  453 QFFFIFMLQQVEKFRPVVETCR---NLCCNSLLNIAVSLVSEVAPQYPRLQQAFQGIIESTVPNMAEELQPELDQLFDKEKNPFTENQDLVEAINQVRFERFDRVLHQVLVEAGDGPPNGGDASDVTPLKEWVTYNLGQWFRFAHGANPTSKVEDMSTILQAYWRVTSKRVVDNACMLLETSFFGQVVDRLETQLLALTQ--AITQEEGQDKAEAKAAAGQEGMGWQQPRLGIFNEDAVLVEKRSFLLMRQQRLKAALGKIENFAPDVLA 717          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A836CBT5_9STRA (Mgm1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT5_9STRA)

HSP 1 Score: 156 bits (394), Expect = 8.640e-40
Identity = 91/251 (36.25%), Postives = 139/251 (55.38%), Query Frame = 1
Query:   10 QVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQP----------ESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELF--LLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVA 726
            Q FY FM+Q VE +RPAVE+CR++   S    L V   L + +A Q+P L   ++  +   VE+  E +   +D +F KE +PFT N+ ++E IN +RF  FD+ +Q  L EAGD P            L +L   V   LG+WY  +HG    + VEDM  +LQAYW V +KR+ DN CM LE  F+  +   +E+ L     T   + +     ED ++VE+R  L++++ R+   L+ +  +AP++VA
Sbjct:  449 QFFYIFMLQQVERFRPAVEACRSEIYASV---LGVGRGLAQAIAPQYPLLVETMQSLVEQTVEEATEALLPELDMVFDKERNPFTENQDLVEAINRVRFERFDRVMQQVLLEAGDAPPPAEKGAPKGSELNSLHDWVSFNLGQWYRYSHGANPTSKVEDMSAILQAYWRVTSKRVCDNACMLLEASFLAAVPDALEAALLSHAQTLDARALAAALQEDAAIVERRALLESRRDRVAAALDRIAAVAPDVVA 696          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A7S2W2A1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2A1_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.470e-36
Identity = 86/244 (35.25%), Postives = 142/244 (58.20%), Query Frame = 1
Query:   16 FYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALD----EAGDQP-ESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELF--LLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVA 726
            FY FM+  +E WR  V++ + +     +  L V++ +   L  Q+P +   V   +    E+    V  RID+ F++E+DPF +N+ +   I  +R   FDKA++ A+     +AGD   + ++ L+  ++++LG WYM NHGV + + +EDM T+L AYW +++KRL +N CM+ E   + +L   +ESEL   + T    VV+ELF E   +VE+R  L+ KK R    ++S+ R+AP+LVA
Sbjct:  434 FYSFMVTKIEDWRAPVDTLKNEVF---DLILAVSTSIFTLLCPQYPEIGKLVSMVVQGWAERHMVAVERRIDEAFKQEADPFVSNDDLGIEIIRVRGERFDKAIERAMKLASTDAGDGTIKDMDKLEARILDKLGFWYMANHGVSSASLIEDMLTVLMAYWALSSKRLTENTCMSFEAHVLQRLSEDIESELLTAVQTQPEDVVKELFNEPKHMVERRTLLKTKKARFDSAMDSITRLAPDLVA 674          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A6V2RT65_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RT65_HETAK)

HSP 1 Score: 143 bits (361), Expect = 1.820e-35
Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 1
Query:    1 MCVQVFYGFMIQNVESWR-PAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIK 684
            M  Q FY FM Q +E WR PA  +     SL     L VAS L E +AVQ+P L   V+   A ++E+   +  + +D++  +E DPFT N+ + + +N IR+  F+ AV  A + A      +E++K    + L  WY   HGV + +N EDM  +L+AYW +A++R VDNVCM +++  +  L G ++ E ++  +  + +   F ED  +  +RR L +K++RL+K
Sbjct:  433 MSPQSFYMFMAQYLEQWRGPAKVAVSEMRSLC----LEVASKLTEIIAVQYPALREGVKKVAAVVLEETMTKALDLVDELLDREKDPFTANDFLAQHVNKIRYDRFELAVVRAFETAAATGTGIESVKQGAAQELQRWYRETHGVNSSSNAEDMSAILEAYWTLASRRFVDNVCMGIDRTMLNSLAGRIQEECYMFVHDEEKLAAFFEEDARLAHRRRELLSKQERLMK 657          
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Match: A0A6V1N3L6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N3L6_HETAK)

HSP 1 Score: 143 bits (361), Expect = 1.830e-35
Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 1
Query:    1 MCVQVFYGFMIQNVESWR-PAVESCRTQASLSANAALTVASLLVETLAVQFPRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTIRFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHKVVEELFLEDTSVVEKRRSLQAKKQRLIK 684
            M  Q FY FM Q +E WR PA  +     SL     L VAS L E +AVQ+P L   V+   A ++E+   +  + +D++  +E DPFT N+ + + +N IR+  F+ AV  A + A      +E++K    + L  WY   HGV + +N EDM  +L+AYW +A++R VDNVCM +++  +  L G ++ E ++  +  + +   F ED  +  +RR L +K++RL+K
Sbjct:  436 MSPQSFYMFMAQYLEQWRGPAKVAVSEMRSLC----LEVASKLTEIIAVQYPALREGVKKVAAVVLEETMTKALDLVDELLDREKDPFTANDFLAQHVNKIRYDRFELAVVRAFETAAATGTGIESVKQGAAQELQRWYRETHGVNSSSNAEDMSAILEAYWTLASRRFVDNVCMGIDRTMLNSLAGRIQEECYMFVHDEEKLAAFFEEDARLAHRRRELLSKQERLMK 660          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9716.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FR39_ECTSI1.280e-13186.94Mx1, Mx-like dynamin-related GTPase n=1 Tax=Ectoca... [more]
A0A836CJ76_9STRA4.540e-10466.04P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3UVE7_HETAK4.030e-5943.95Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A8J2SEQ3_9STRA1.700e-5644.88Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3NNK1_9STRA1.320e-4740.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D8LJA2_ECTSI1.160e-4137.04Mgm1 homolog, dynamin-related GTPase n=2 Tax=Ectoc... [more]
A0A836CBT5_9STRA8.640e-4036.25Mgm1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2W2A1_9STRA4.470e-3635.25Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6V2RT65_HETAK1.820e-3534.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1N3L6_HETAK1.830e-3534.93Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9716contigC-tenellus_contig9716:610..5744 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FR39
PFAMsDynamin_M,Dynamin_N,GED
Model size744
Max annot lvl2759|Eukaryota
KEGG koko:K20291
Hectar predicted targeting categoryother localisation
Exons6
Evalue2.1e-132
EggNOG OGsCOG0699@1|root,KOG0446@2759|Eukaryota
Descriptionmitochondrial fission
Cds size744
COG categoryI
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9716.1.1prot_C-tenellus_contig9716.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9716 610..5744 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790197.7630558-CDS-C-tenellus_contig9716:609..7291680790197.7630558-CDS-C-tenellus_contig9716:609..729Choristocarpus tenellus KU2346CDSC-tenellus_contig9716 610..729 -
1680790197.7750676-CDS-C-tenellus_contig9716:1370..15201680790197.7750676-CDS-C-tenellus_contig9716:1370..1520Choristocarpus tenellus KU2346CDSC-tenellus_contig9716 1371..1520 -
1680790197.7900834-CDS-C-tenellus_contig9716:2205..23491680790197.7900834-CDS-C-tenellus_contig9716:2205..2349Choristocarpus tenellus KU2346CDSC-tenellus_contig9716 2206..2349 -
1680790197.8003542-CDS-C-tenellus_contig9716:3614..37201680790197.8003542-CDS-C-tenellus_contig9716:3614..3720Choristocarpus tenellus KU2346CDSC-tenellus_contig9716 3615..3720 -
1680790197.8110547-CDS-C-tenellus_contig9716:5094..52281680790197.8110547-CDS-C-tenellus_contig9716:5094..5228Choristocarpus tenellus KU2346CDSC-tenellus_contig9716 5095..5228 -
1680790197.821755-CDS-C-tenellus_contig9716:5654..57441680790197.821755-CDS-C-tenellus_contig9716:5654..5744Choristocarpus tenellus KU2346CDSC-tenellus_contig9716 5655..5744 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9716.1.1

>prot_C-tenellus_contig9716.1.1 ID=prot_C-tenellus_contig9716.1.1|Name=mRNA_C-tenellus_contig9716.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=248bp
MCVQVFYGFMIQNVESWRPAVESCRTQASLSANAALTVASLLVETLAVQF
PRLCAAVRDALASLVEQLAEEVSNRIDDIFQKESDPFTTNEGMLEVINTI
RFRHFDKAVQDALDEAGDQPESLEALKMCVMERLGEWYMVNHGVGTMANV
EDMCTLLQAYWNVATKRLVDNVCMTLEQDFVVKLLGGVESELFLLTNHHK
VVEELFLEDTSVVEKRRSLQAKKQRLIKGLESLMRMAPELVAERPDGG
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mRNA from alignment at C-tenellus_contig9716:610..5744-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9716.1.1 ID=mRNA_C-tenellus_contig9716.1.1|Name=mRNA_C-tenellus_contig9716.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5135bp|location=Sequence derived from alignment at C-tenellus_contig9716:610..5744- (Choristocarpus tenellus KU2346)
ATGTGTGTCCAGGTGTTCTATGGTTTCATGATTCAGAATGTGGAGTCATG GCGCCCTGCTGTTGAATCATGCCGCACACAGGCAAGTCTTGTCTTGTCTG CCTTGTATGTCTTGTCTGTCCCTTTGGTTGTAGGTCCCCTTTGGATACAC TTTCCTCACCTTTACATATTGATTTTTTTTTAAAAGAGAGATTGACATTA GAAGCGGGTTTTTATTTTTTATGATGATTAGCTGAGATAAGGTCTATATC ATCTCTTACGTCACAGTGTTATTATCACTATTATTATTATTATTATTATT ATTATTATTACGTGCTCTGTAGCAATGCACCACCATCTTGTTCCAGTCAT TTACGACTACTACCATCATCTTCCCCTTCCCCTCTCCGGTCACCCCTAAC CCTAACCTATTTGTACTGATACATCCACTCGTGCTGCCCTCCTCCCCTAA CCCTAACCCTTAACCCTTAACCCCTTTTTTGTCTTTATCGATATATATAT ATATATATATATATAGTCTGCCAATGCAGCTCTTACAGTTGCCTCTTTAC TGGTGGAAACACTTGCGGTACAGTTTCCTCGGTTGTGTGCAGCTGTAAGA GACGCCTTAGCAAGTCTTGTAGAACAACTTGCAGAGGAGGTCAGCAACAG GTGGGACAATACATAAAATACAACACTGCACAGTACAGTACAATACAATT GATACAGTACAGTACAGTATTTAGTAGTATTGTTGGATGATATTGATGAT GTATAGTTTATGTTATTTATGATATTTATGCTGTTGAAAGGGATCGGTGA GGGTGATATTTATGCCGTTTTGAATGTCACTCGTGGACTCAACTATTTAT TTATTTTTGTAGTATTGGTTGAGACTATTGGATAAGACTAATCTTTTTGA TAAAGTTTTGGGAGTAGCCTGGTCCTACTGCGGCTGCTACGCCTCCACGG TTTAATGAAAACCTTGGATATTATCTCATCGTGGTACACATTTTAATAGT GCTTCCTACTTCTTGAATCATATTTTTATTATTCTTGAATTATGAAATGA TTAAACATGTGTCTTTTCATTGCATTGATGGTTTGTACAGGTTGCATTAA TAGTACTAACATGACCAATGACCAATGCACTGCTGATATACCATGTTCTG ACTCTACTCTACCTATTTTCAACATTATTATTATTTATTTATTTTAGTAT TAATATTAATTGTGATATTAGCAGTACTATTTTATTCATTTTGACGCTAA TATTGTAGGTTTAGGGTTAGGGTTTGGGTTACACACTGTAAGTAAGAGTG TGGGGACACCCCCCCCAAGAAGCTAGTTGAAAATAAATCAAGCAAATGGT TTATGTTTGTATGTTTGAATAGTCTACACTCTATGTATGTATGTTTAATG AGAAAATAAACTTATTGAATGCATTGAATATACTGAATAAGTAGAGGACG AGACTCAGTGGGGACTGTGATCAGGGAGTCAGACACAAGGTTTTTGAGTA GTATTTTTGAAATGAGAAAGGGTTATGGTGATCAGGGAGTCAGACACAAG GTTTTTGAGTAGTAGTTTTGAAATGAGAAAGGGTCTTTTGTTTTTGAATT GACCGTAACCCTTGTTGACTTGTTAGTGAGGCATTAGTGTTAGTGTTGTG CTTGTCCTATACCTGTGAGAAGACACTAATGCTGTCTGGATCAGTATAAC GTTCTTAAGAGTCTTGTGGTTTTTGAGAGTGTGTTATTATTGATGGTACA TTTATTATTATTTATTATCTTTTGGTAGTGTTGAATTAGGGTTAGAGTGG AGAGGTTTGGGGTCAGGGCAGGGTTGAACTTCAAAAAAAAATCTGGTTCA GCTTTGGTTGGGTGTAGGTTGGAGGGTTCCTATGGGGGGATTGGACAGCC TTGCTCCACAAGCCTGTCCCTTTCAATGACCTCCTTTTGATGTTTTTCTT CATTTCTCTGTGGTGGTGGATAATAGATTTTGATGGATTTTGATGGATTA TGTGTGTGTATTTTAACATGGCAGGATTGATGACATCTTTCAGAAAGAAT CTGACCCCTTCACCACCAATGAGGGCATGTTGGAGGTCATCAACACAATA CGATTCCGTCACTTTGACAAGGCTGTTCAGGTGTGTATTTTTGTATTTAT TTTTGTTGTTATTATTATTATTATTATTATTTATTTTTGTTGAATTATGT AGGTTTTATACTGTTGCAGTGTTGGTTGAGGACATGATTGGTTTGTTTTA TGATGGAAGGTGAGGTGTGCAGCGCATGCTCCAATGAAAAATATTATTAT ATTATTTAGGGTTAGGGTGGGTATGGGTAGTGAAGTTCCTTTAGTGGTAG TATGGCATGGCATGGCGCAGGTCTTTAGTCTTCATGTGGCGTTTGAGAAA ATTCTCTATGTGTACATCAATGTTCTTGTATTATTATTATTATTATTATT ATTATTATTAGTAGTAGTAGTAGTAGTATTTCAGTATTCATACTAGTATT ACAATCGTGGTGTTAGTAGTAGTATAGTACTGGTATGGTTGATTTTAATC AGATTAGCTGTATTATTTGTATCAGTTTTAGTAGTGTAGATATTTTCCCC TAACCCTAGTGTTTTGTAGGTTACTTGGGTATATACTATCGTAGAAGGTA CAAGGAGAGGGTTGAGGTCACAACTCATGCAGCAGTAGACGTTAAGATAG GGTTAGGGTTATTTCAATGTCTATCTCCACCGCCTTCCAATAACGAGATG CCTTCCCCCCTGTTCCCCCTAGATCGTGACAAGGTATGACAATATCGTAT ACTATTAAATATCAACAATATCGAAAATATCAATGGTCTATTTGGGAGTA TTGACATGATACTCAACAGCAACAGTATGGCATTAAATACCTCAGGTGCT GTAGCAAAATAATTTTCTTATTCACCTTTGAGTATATTATTATTTTTAAC AAAGTGTGGAGTATTCCATTGAATGTACTATTAATAGCATTCAACTATTA TATGAAAACCTGTTTGCCCTCCATCACTGCCCTATTGGGAACCGCAATAC CCTACCTAACCCTAACCCTAACCCTAATCCCTGCCTTGGTCATTGAGAGT TGTTCATGAATCACTCCCTGTCACCTCTGGTTCTGTTTTGAAGAGATAGG TTGTAATATTTTTTTCCATTACTGCTTTGTGTTATAGGGCTAGGGTTAGT TCTGTAGTTTGAAATTTAATTTAGAAAAAAAGAAAAGTGATTAGGGCTGT CGGGGTGTACAATAAAACAATAAAAATATAAATAATGTAATGCTCTAGTA GTATAGCGATAACCCTAACCCCACATGTGTGTGTGTAAGATGTAAGGATT GTAGTGAAACTATTGAGTATTTGATGAGTTTTTTTGTCACCATAGGATGC ACTGGATGAAGCAGGAGACCAGCCGGAGAGCTTGGAGGCCTTGAAGATGT GTGTTATGGAGCGGTTGGGGGAGTGGTATATGGTCAATCATGGGGTGGGC ACCATGGCCAACGTAGAGGACATGTGTACCTTGCTGCAGGTGGGTCTTTG GTTTTGTATCTGTAACTGTAATGTAACTGTGACTGTACTGTCAAATATGA GTGTGTGCGTTTGTATAGTACCTTTTTAGAGTGCACATGAGAAGGAGTGA AGGGTGTTATTTTGGCGTTGGTTGGAGTTGTGGAGGTGCAGGCGTGTGTT GTCTATTTGCCTGTTTAGCTGTTGCGTGGTCTCATTAATGTCCTTATATA CGTACATATTATGTATGTATAGGTATGTATGTATGTGTAGTATACTAATG ATAGAAAATATGTGGATGTTAGGGTTAGGGCAGGTGAGGGGGACAAGGAC AAATAGGGTGATTTTTTTTATCATGGGCATATATCAGAAGGGTGGTGAAT TAAACCAATGAATGAAGAGGAGAAGGAGAGCATCGACTAATCCAATGCTG TAGTTGATGACGAGCAGTCGTGTTATGTCATGTCACATGATGTGATGTGA TGTGATGTGATGTGTTTTCTAGAGTTGTGAATTGCATATCTTTTTTTGAA CAAGAGCGTTGTCTGTTGTATCAGTCACAGTAACATTTGATAATGTTTGA AAGGATCAGTGTCTGTATAGTATTGATAGTCATCAACTCTGAAAGTTTGT CTGAAATGTGTGTTTGTCTGTGGTGGTGGTGGTGGTGGTGATGGGTGTGG TTGGTTTTTCACGATATTGGACAGGCGTATTGGAACGTGGCAACAAAACG CCTGGTGGACAATGTGTGCATGACACTGGAACAGGACTTTGTTGTGAAGC TGCTGGGGGGTGTCGAGTCTGAACTGTTCCTCTTGACTAATCATCACAAA GTGGTGGAGGAGTTGTTCCTAGAGGTGACAAAAGATAGAGACAAAGTATC TTATCTTAGAGGGTAGAGCTGCGTCCATTTGGGTGCCAAAATCCAATGTT GTGATTTTGTTGTAATTTTGGTTATGGTGTTTGTTAGGAGATGTCGATAT ACTTGTTCTGATATACACCTTTTCATACGTTTTACCTACTCTGAAATGAT TTCGGAGTAGGTAAAAAAAAACATAATTAATAAAAACTGTGGGAAGGCAT GCATGCCCCAAACAGACAAACAGGTCAAAAATTGTCACTAAAAGACCCTC TAACATACTTTCACTCAAACATAGAGATTGGTTGTTAGGAAGGAGATGAT GGACCACTGCTGTACCTCACTTGCATACGTACATTCGTCTTGTGTTGTTG ATACACCTGTACTCAAAAATATTGTTTATTGTATTTTCTTTGGAGGAGGC ATTTCGCTTTATTGTAGGAGGCGTGTTTGGTAAAAGAATAAGAGGTCGTT CTGGTGTATTGGTTGTACATGGTAATGTTGAATAGAAAGAGTACTCTTAC TCTGACAGGCACGAACCCTTCCTCTACACCCTCCCCTGTTCACAGTTCAT CTTTTTGATCAACTTTTTATCATTTATTTTGTAACTGATACATGTGTGTT GTATGTAACTGAAAGGACACTAGTGTGGTGGAAAAGCGACGAAGCCTTCA GGCCAAGAAACAACGCCTGATCAAGGGACTAGAATCGTTGATGCGCATGG CTCCGGAGCTGGTCGCAGAGCGACCTGATGGTGGG
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Coding sequence (CDS) from alignment at C-tenellus_contig9716:610..5744-

>mRNA_C-tenellus_contig9716.1.1 ID=mRNA_C-tenellus_contig9716.1.1|Name=mRNA_C-tenellus_contig9716.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=744bp|location=Sequence derived from alignment at C-tenellus_contig9716:610..5744- (Choristocarpus tenellus KU2346)
ATGTGTGTCCAGGTGTTCTATGGTTTCATGATTCAGAATGTGGAGTCATG
GCGCCCTGCTGTTGAATCATGCCGCACACAGGCAAGTCTTTCTGCCAATG
CAGCTCTTACAGTTGCCTCTTTACTGGTGGAAACACTTGCGGTACAGTTT
CCTCGGTTGTGTGCAGCTGTAAGAGACGCCTTAGCAAGTCTTGTAGAACA
ACTTGCAGAGGAGGTCAGCAACAGGATTGATGACATCTTTCAGAAAGAAT
CTGACCCCTTCACCACCAATGAGGGCATGTTGGAGGTCATCAACACAATA
CGATTCCGTCACTTTGACAAGGCTGTTCAGGATGCACTGGATGAAGCAGG
AGACCAGCCGGAGAGCTTGGAGGCCTTGAAGATGTGTGTTATGGAGCGGT
TGGGGGAGTGGTATATGGTCAATCATGGGGTGGGCACCATGGCCAACGTA
GAGGACATGTGTACCTTGCTGCAGGCGTATTGGAACGTGGCAACAAAACG
CCTGGTGGACAATGTGTGCATGACACTGGAACAGGACTTTGTTGTGAAGC
TGCTGGGGGGTGTCGAGTCTGAACTGTTCCTCTTGACTAATCATCACAAA
GTGGTGGAGGAGTTGTTCCTAGAGGACACTAGTGTGGTGGAAAAGCGACG
AAGCCTTCAGGCCAAGAAACAACGCCTGATCAAGGGACTAGAATCGTTGA
TGCGCATGGCTCCGGAGCTGGTCGCAGAGCGACCTGATGGTGGG
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