mRNA_C-tenellus_contig9550.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A6H5JMZ8_9PHAE (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ8_9PHAE) HSP 1 Score: 369 bits (947), Expect = 1.200e-115 Identity = 198/253 (78.26%), Postives = 216/253 (85.38%), Query Frame = 1 Query: 1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDE--PGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 IYLAA IGAITATGSVTAFAKLQG+LSS PLSLPGRDQLN+AMG GI AGA AL ++GD M+ ALG G++V+ LLG H TASIGGADMPVVITLLNSYSGWALCAEGFMLNN+LL IVGALIGSSGAILTQIMCQAMNR++ NVISGGFGT+ K + P GVH E TA+ V QK+ AK VIIVPGYGLAVARAQ A+AELTR L++ GVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEEL E Sbjct: 795 IYLAAVIGAITATGSVTAFAKLQGILSSSPLSLPGRDQLNIAMGSGILAGAVALASSGDVSGMLPALGVGSVVAALLGAHATASIGGADMPVVITLLNSYSGWALCAEGFMLNNDLLAIVGALIGSSGAILTQIMCQAMNRNIFNVISGGFGTVQKAPAAGGDAGPAGVHTETTAESVAQKMLMAKSVIIVPGYGLAVARAQQAVAELTRKLTEAGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELDE 1047
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A1D2AEE8_AUXPR (Proton-translocating NAD(P)(+) transhydrogenase (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AEE8_AUXPR) HSP 1 Score: 298 bits (764), Expect = 2.670e-94 Identity = 163/250 (65.20%), Postives = 189/250 (75.60%), Query Frame = 1 Query: 4 YLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 Y IGA+T TGS AF KL G+L S+PL+LPG++ LNL + G AA AA L TGDPG +AALGA ++G LG HMTASIGGADMPVVITLLNSYSG+ALCAEGFML N+LLT VGALIGSSGAIL+ IMC+AMNR L NVI GG+ T + + E GG H E A + L A+ V+IVPGYGLAVA AQYAIA+L + L K + V+FGIHPVAGRMPGQLNVLLAEAGVPYD+VEE+ E Sbjct: 191 YFGTFIGAVTLTGSAVAFGKLHGVLPSKPLALPGKNALNLGLLAGNAAAGAAFLTTGDPGVALAALGATTALAGGLGAHMTASIGGADMPVVITLLNSYSGYALCAEGFMLGNDLLTTVGALIGSSGAILSYIMCRAMNRSLANVILGGYATA--AAGPAAEVGGTHAEVDAHGAAEVLTSARSVLIVPGYGLAVAGAQYAIADLVKRLRSKNIAVKFGIHPVAGRMPGQLNVLLAEAGVPYDIVEEMDE 438
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: W7U3Y9_9STRA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Y9_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.270e-93 Identity = 163/251 (64.94%), Postives = 192/251 (76.49%), Query Frame = 1 Query: 1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 +YLA+ IG+ITATGSV AF KLQG L S+ LSLPGRD +NL +G G AA A G P +A LGAG+L+SG LG HMTASIGGADMPVV+T+LNSYSGWALCAEGFMLN+ LLT VGALIGSSGAILT IMC+AMNRD+++V+ GG+GT + + + G V+ L +K+V+IVPGYGLAVA+AQYAIAEL L G+K FGIHPVAGRMPGQLNVLLAEAGVPYDVV+E+ E Sbjct: 449 VYLASVIGSITATGSVVAFGKLQGWLHSKALSLPGRDAINLGLGVGTAASAVGFGLAGSPEGALACLGAGSLLSGALGAHMTASIGGADMPVVVTVLNSYSGWALCAEGFMLNSPLLTTVGALIGSSGAILTHIMCKAMNRDIVSVLLGGYGTSSTGKGEAMKIEGEPTMTDVAQTVELLTNSKKVVIVPGYGLAVAKAQYAIAELVEKLHHHGIKTTFGIHPVAGRMPGQLNVLLAEAGVPYDVVQEMDE 699
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A7S3CBX0_9CHLO (Proton-translocating NAD(P)(+) transhydrogenase (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CBX0_9CHLO) HSP 1 Score: 286 bits (732), Expect = 1.270e-92 Identity = 153/251 (60.96%), Postives = 188/251 (74.90%), Query Frame = 1 Query: 1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 IYL IGA+T TGS AF KL G++SS ++LPG++ +N+ + G A A L++T DP +A LGA + S +LG HMT SIGGADMPVVITLLNSYSG+ALCAEGFMLNN+LLT VGALIGSSGAIL+ IMC+AMNR L NVI GG S + + GVH+E + + A+++IIVPGYGLAVA AQY +A++ R+L +KGV V+FGIHPVAGRMPGQLNVLLAEAGVPYD+VEE+ E Sbjct: 41 IYLGTLIGAVTLTGSAVAFGKLHGVMSSAAMNLPGKNLINIGLMGTNLAAGAMLMSTSDPATGLACLGATTIASSILGAHMTNSIGGADMPVVITLLNSYSGYALCAEGFMLNNDLLTTVGALIGSSGAILSYIMCKAMNRSLANVILGGIAQ----SSSAQKVEGVHQETSVQDAADLMTSAEKMIIVPGYGLAVAGAQYTVADMVRMLREKGVDVKFGIHPVAGRMPGQLNVLLAEAGVPYDIVEEMEE 287
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A3M7KUV2_AUXPR (Proton-translocating NAD(P)(+) transhydrogenase (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KUV2_AUXPR) HSP 1 Score: 298 bits (764), Expect = 1.520e-92 Identity = 163/250 (65.20%), Postives = 189/250 (75.60%), Query Frame = 1 Query: 4 YLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 Y IGA+T TGS AF KL G+L S+PL+LPG++ LNL + G AA AA L TGDPG +AALGA ++G LG HMTASIGGADMPVVITLLNSYSG+ALCAEGFML N+LLT VGALIGSSGAIL+ IMC+AMNR L NVI GG+ T + + E GG H E A + L A+ V+IVPGYGLAVA AQYAIA+L + L K + V+FGIHPVAGRMPGQLNVLLAEAGVPYD+VEE+ E Sbjct: 38 YFGTFIGAVTLTGSAVAFGKLHGVLPSKPLALPGKNALNLGLLAGNAAAGAAFLTTGDPGVALAALGATTALAGGLGAHMTASIGGADMPVVITLLNSYSGYALCAEGFMLGNDLLTTVGALIGSSGAILSYIMCRAMNRSLANVILGGYATA--AAGPAAEVGGTHAEVDAHGAAEVLTSARSVLIVPGYGLAVAGAQYAIADLVKRLRSKNIAVKFGIHPVAGRMPGQLNVLLAEAGVPYDIVEEMDE 285
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A7S3FG00_9VIRI (NAD(P) transhydrogenase subunit beta n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FG00_9VIRI) HSP 1 Score: 288 bits (738), Expect = 1.010e-91 Identity = 160/248 (64.52%), Postives = 193/248 (77.82%), Query Frame = 1 Query: 16 AIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAAL--LATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 A+GA+T TGS+ AF KLQG+L S PL+LPG+D +N G A A AL + TG+ +A L A A + G LG HMTASIGGADMPVV+TLLNSYSGWALCAEGFML+N+LLTIVG+L+GSSGAIL+ IMC+AMNR L NVI GG+G N + E G H EAT + VV ++ AK+VIIVPGYGLAVA+AQYA+A++ + LSD+G++VRF IHPVAGRMPGQLNVLLAEAGVPYD+V EL E Sbjct: 92 ALGAVTMTGSLVAFGKLQGMLKSTPLNLPGKDVINA---GAALASAGALYGVMTGNKALGMAGLLATAGLWGGLGLHMTASIGGADMPVVVTLLNSYSGWALCAEGFMLDNDLLTIVGSLVGSSGAILSYIMCKAMNRSLPNVILGGWG--NGAKGKAMEVTGTHTEATHESVVDQITAAKDVIIVPGYGLAVAKAQYAVADMAQTLSDQGIRVRFAIHPVAGRMPGQLNVLLAEAGVPYDIVHELDE 334
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A4D9DBW7_9STRA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBW7_9STRA) HSP 1 Score: 303 bits (776), Expect = 4.630e-91 Identity = 163/251 (64.94%), Postives = 192/251 (76.49%), Query Frame = 1 Query: 1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 +YLA+ IG+ITATGSV AF KLQG L S+ LSLPGRD +NL +G G AA A G P +A LGAG+L+SG LG HMTASIGGADMPVV+T+LNSYSGWALCAEGFMLN+ LLT VGALIGSSGAILT IMC+AMNRD+++V+ GG+GT + + + G V+ L +K+V+IVPGYGLAVA+AQYAIAEL L G+K FGIHPVAGRMPGQLNVLLAEAGVPYDVV+E+ E Sbjct: 785 VYLASVIGSITATGSVVAFGKLQGWLHSKALSLPGRDAINLGLGVGTAASAVGFGLAGSPEGALACLGAGSLLSGALGAHMTASIGGADMPVVVTVLNSYSGWALCAEGFMLNSPLLTTVGALIGSSGAILTHIMCKAMNRDIVSVLLGGYGTTSTGKGEAMKIEGEPTMTDVAQTVELLTNSKKVVIVPGYGLAVAKAQYAIAELVEKLHHHGIKTTFGIHPVAGRMPGQLNVLLAEAGVPYDVVQEMDE 1035
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: T2MDQ1_HYDVU (Proton-translocating NAD(P)(+) transhydrogenase n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2MDQ1_HYDVU) HSP 1 Score: 300 bits (769), Expect = 2.350e-90 Identity = 157/251 (62.55%), Postives = 189/251 (75.30%), Query Frame = 1 Query: 1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 IY IG +T TGS+TAF KLQGLL+S PL+LPG++ N+AMG + T DP I LGA + +S +G HMTASIGGADMPVVIT+LNSYSGWALCAEGFMLNN+LLTIVGAL+G SG IL+ IMC+AMNR L NV+ GG+GT+ + + G H E + V+ +A AK +IIVPGYGLAVA+AQYAIAE+ ++L +KG+ VRFGIHPVAGRMPGQLNVLLAEAGVPYDVV E+ E Sbjct: 734 IYAGTFIGGVTFTGSLTAFGKLQGLLASAPLNLPGKNFYNIAMGTASVGALGVFMNTNDPSLGIPMLGAASALSATMGVHMTASIGGADMPVVITVLNSYSGWALCAEGFMLNNDLLTIVGALVGFSGGILSYIMCKAMNRSLTNVLFGGYGTLTSGTGEKMKITGTHTEINVNSTVELIANAKNIIIVPGYGLAVAKAQYAIAEMVKILREKGINVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVLEMDE 984
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A6U9RDM2_9CHLO (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RDM2_9CHLO) HSP 1 Score: 297 bits (761), Expect = 2.550e-90 Identity = 160/245 (65.31%), Postives = 187/245 (76.33%), Query Frame = 1 Query: 19 IGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 IGA+T TGS+ AFAKLQGL+ S PLSLPG++ LN+ M G A AA +A GD A LG +SGLLG H+ +SIGGADMPVVIT+LNSYSGWALCAEGFMLNN+LLT+VGALIGSSG IL+ IMC+AMNR L NVI GG GT K + + GG HRE +D V +L +AK++IIVPGYG+AVA AQYAI+E+ L + G VRF IHPVAGRMPGQLNVLLAEAGVPYDVV E+ E Sbjct: 563 IGAVTLTGSLVAFAKLQGLMKSSPLSLPGKNLLNIGMLAGNAGCAAGFMAAGDVATGTAMLGTTTGISGLLGWHLVSSIGGADMPVVITVLNSYSGWALCAEGFMLNNDLLTVVGALIGSSGGILSYIMCKAMNRSLTNVIFGGIGTSAKPKGEAMKVGGDHREVDSDGAVAQLLDAKDIIIVPGYGVAVAHAQYAISEMVDKLREHGANVRFAIHPVAGRMPGQLNVLLAEAGVPYDVVHEMEE 807
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A7S2ELG3_TRICV (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ELG3_TRICV) HSP 1 Score: 282 bits (721), Expect = 3.100e-90 Identity = 162/255 (63.53%), Postives = 190/255 (74.51%), Query Frame = 1 Query: 19 IGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATG-------DPGQM-IAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTI--NKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753 IG ITATGS+ AF KL G+L +PLSLPGRD LNLAM AAG AA L+ DP + +A+LG A VS ++G H+TASIGGADMPVVIT+LNSYSGWALCAEGFML N LL VGALIG SGAILT IMC+AM RD+++VI GG GT K+ SD P G AT D V + LAEAK ++IVPGYGLAVA+AQ++IA++ + L +G VRFGIHPVAGRMPGQLNVLLAEAGVPYD+V E+ E Sbjct: 1 IGGITATGSMVAFGKLAGMLDPKPLSLPGRDALNLAMLTTCAAGMAAFLSPALGADVISDPESLRLASLGLVAAVSSVMGLHLTASIGGADMPVVITVLNSYSGWALCAEGFMLGNPLLAQVGALIGFSGAILTWIMCEAMGRDIVSVILGGAGTAAPKKIEGDSDGPVGEVHIATVDNVAETLAEAKNIVIVPGYGLAVAQAQFSIADIAKKLRAEGKNVRFGIHPVAGRMPGQLNVLLAEAGVPYDMVLEMDE 255 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9550.1.1 >prot_C-tenellus_contig9550.1.1 ID=prot_C-tenellus_contig9550.1.1|Name=mRNA_C-tenellus_contig9550.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=212bp MGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVback to top mRNA from alignment at C-tenellus_contig9550:482..4540- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9550.1.1 ID=mRNA_C-tenellus_contig9550.1.1|Name=mRNA_C-tenellus_contig9550.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4059bp|location=Sequence derived from alignment at C-tenellus_contig9550:482..4540- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9550:482..4540- >mRNA_C-tenellus_contig9550.1.1 ID=mRNA_C-tenellus_contig9550.1.1|Name=mRNA_C-tenellus_contig9550.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=636bp|location=Sequence derived from alignment at C-tenellus_contig9550:482..4540- (Choristocarpus tenellus KU2346)back to top |