mRNA_C-tenellus_contig9550.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9550.1.1
Unique NamemRNA_C-tenellus_contig9550.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A6H5JMZ8_9PHAE (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ8_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 1.200e-115
Identity = 198/253 (78.26%), Postives = 216/253 (85.38%), Query Frame = 1
Query:    1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDE--PGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            IYLAA IGAITATGSVTAFAKLQG+LSS PLSLPGRDQLN+AMG GI AGA AL ++GD   M+ ALG G++V+ LLG H TASIGGADMPVVITLLNSYSGWALCAEGFMLNN+LL IVGALIGSSGAILTQIMCQAMNR++ NVISGGFGT+ K      +  P GVH E TA+ V QK+  AK VIIVPGYGLAVARAQ A+AELTR L++ GVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEEL E
Sbjct:  795 IYLAAVIGAITATGSVTAFAKLQGILSSSPLSLPGRDQLNIAMGSGILAGAVALASSGDVSGMLPALGVGSVVAALLGAHATASIGGADMPVVITLLNSYSGWALCAEGFMLNNDLLAIVGALIGSSGAILTQIMCQAMNRNIFNVISGGFGTVQKAPAAGGDAGPAGVHTETTAESVAQKMLMAKSVIIVPGYGLAVARAQQAVAELTRKLTEAGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELDE 1047          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A1D2AEE8_AUXPR (Proton-translocating NAD(P)(+) transhydrogenase (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AEE8_AUXPR)

HSP 1 Score: 298 bits (764), Expect = 2.670e-94
Identity = 163/250 (65.20%), Postives = 189/250 (75.60%), Query Frame = 1
Query:    4 YLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            Y    IGA+T TGS  AF KL G+L S+PL+LPG++ LNL +  G AA  AA L TGDPG  +AALGA   ++G LG HMTASIGGADMPVVITLLNSYSG+ALCAEGFML N+LLT VGALIGSSGAIL+ IMC+AMNR L NVI GG+ T    +  + E GG H E  A    + L  A+ V+IVPGYGLAVA AQYAIA+L + L  K + V+FGIHPVAGRMPGQLNVLLAEAGVPYD+VEE+ E
Sbjct:  191 YFGTFIGAVTLTGSAVAFGKLHGVLPSKPLALPGKNALNLGLLAGNAAAGAAFLTTGDPGVALAALGATTALAGGLGAHMTASIGGADMPVVITLLNSYSGYALCAEGFMLGNDLLTTVGALIGSSGAILSYIMCRAMNRSLANVILGGYATA--AAGPAAEVGGTHAEVDAHGAAEVLTSARSVLIVPGYGLAVAGAQYAIADLVKRLRSKNIAVKFGIHPVAGRMPGQLNVLLAEAGVPYDIVEEMDE 438          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: W7U3Y9_9STRA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Y9_9STRA)

HSP 1 Score: 303 bits (775), Expect = 3.270e-93
Identity = 163/251 (64.94%), Postives = 192/251 (76.49%), Query Frame = 1
Query:    1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            +YLA+ IG+ITATGSV AF KLQG L S+ LSLPGRD +NL +G G AA A      G P   +A LGAG+L+SG LG HMTASIGGADMPVV+T+LNSYSGWALCAEGFMLN+ LLT VGALIGSSGAILT IMC+AMNRD+++V+ GG+GT +     + +  G          V+ L  +K+V+IVPGYGLAVA+AQYAIAEL   L   G+K  FGIHPVAGRMPGQLNVLLAEAGVPYDVV+E+ E
Sbjct:  449 VYLASVIGSITATGSVVAFGKLQGWLHSKALSLPGRDAINLGLGVGTAASAVGFGLAGSPEGALACLGAGSLLSGALGAHMTASIGGADMPVVVTVLNSYSGWALCAEGFMLNSPLLTTVGALIGSSGAILTHIMCKAMNRDIVSVLLGGYGTSSTGKGEAMKIEGEPTMTDVAQTVELLTNSKKVVIVPGYGLAVAKAQYAIAELVEKLHHHGIKTTFGIHPVAGRMPGQLNVLLAEAGVPYDVVQEMDE 699          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A7S3CBX0_9CHLO (Proton-translocating NAD(P)(+) transhydrogenase (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CBX0_9CHLO)

HSP 1 Score: 286 bits (732), Expect = 1.270e-92
Identity = 153/251 (60.96%), Postives = 188/251 (74.90%), Query Frame = 1
Query:    1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            IYL   IGA+T TGS  AF KL G++SS  ++LPG++ +N+ + G   A  A L++T DP   +A LGA  + S +LG HMT SIGGADMPVVITLLNSYSG+ALCAEGFMLNN+LLT VGALIGSSGAIL+ IMC+AMNR L NVI GG       S  + +  GVH+E +       +  A+++IIVPGYGLAVA AQY +A++ R+L +KGV V+FGIHPVAGRMPGQLNVLLAEAGVPYD+VEE+ E
Sbjct:   41 IYLGTLIGAVTLTGSAVAFGKLHGVMSSAAMNLPGKNLINIGLMGTNLAAGAMLMSTSDPATGLACLGATTIASSILGAHMTNSIGGADMPVVITLLNSYSGYALCAEGFMLNNDLLTTVGALIGSSGAILSYIMCKAMNRSLANVILGGIAQ----SSSAQKVEGVHQETSVQDAADLMTSAEKMIIVPGYGLAVAGAQYTVADMVRMLREKGVDVKFGIHPVAGRMPGQLNVLLAEAGVPYDIVEEMEE 287          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A3M7KUV2_AUXPR (Proton-translocating NAD(P)(+) transhydrogenase (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KUV2_AUXPR)

HSP 1 Score: 298 bits (764), Expect = 1.520e-92
Identity = 163/250 (65.20%), Postives = 189/250 (75.60%), Query Frame = 1
Query:    4 YLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            Y    IGA+T TGS  AF KL G+L S+PL+LPG++ LNL +  G AA  AA L TGDPG  +AALGA   ++G LG HMTASIGGADMPVVITLLNSYSG+ALCAEGFML N+LLT VGALIGSSGAIL+ IMC+AMNR L NVI GG+ T    +  + E GG H E  A    + L  A+ V+IVPGYGLAVA AQYAIA+L + L  K + V+FGIHPVAGRMPGQLNVLLAEAGVPYD+VEE+ E
Sbjct:   38 YFGTFIGAVTLTGSAVAFGKLHGVLPSKPLALPGKNALNLGLLAGNAAAGAAFLTTGDPGVALAALGATTALAGGLGAHMTASIGGADMPVVITLLNSYSGYALCAEGFMLGNDLLTTVGALIGSSGAILSYIMCRAMNRSLANVILGGYATA--AAGPAAEVGGTHAEVDAHGAAEVLTSARSVLIVPGYGLAVAGAQYAIADLVKRLRSKNIAVKFGIHPVAGRMPGQLNVLLAEAGVPYDIVEEMDE 285          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A7S3FG00_9VIRI (NAD(P) transhydrogenase subunit beta n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FG00_9VIRI)

HSP 1 Score: 288 bits (738), Expect = 1.010e-91
Identity = 160/248 (64.52%), Postives = 193/248 (77.82%), Query Frame = 1
Query:   16 AIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAAL--LATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            A+GA+T TGS+ AF KLQG+L S PL+LPG+D +N    G   A A AL  + TG+    +A L A A + G LG HMTASIGGADMPVV+TLLNSYSGWALCAEGFML+N+LLTIVG+L+GSSGAIL+ IMC+AMNR L NVI GG+G  N     + E  G H EAT + VV ++  AK+VIIVPGYGLAVA+AQYA+A++ + LSD+G++VRF IHPVAGRMPGQLNVLLAEAGVPYD+V EL E
Sbjct:   92 ALGAVTMTGSLVAFGKLQGMLKSTPLNLPGKDVINA---GAALASAGALYGVMTGNKALGMAGLLATAGLWGGLGLHMTASIGGADMPVVVTLLNSYSGWALCAEGFMLDNDLLTIVGSLVGSSGAILSYIMCKAMNRSLPNVILGGWG--NGAKGKAMEVTGTHTEATHESVVDQITAAKDVIIVPGYGLAVAKAQYAVADMAQTLSDQGIRVRFAIHPVAGRMPGQLNVLLAEAGVPYDIVHELDE 334          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A4D9DBW7_9STRA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBW7_9STRA)

HSP 1 Score: 303 bits (776), Expect = 4.630e-91
Identity = 163/251 (64.94%), Postives = 192/251 (76.49%), Query Frame = 1
Query:    1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            +YLA+ IG+ITATGSV AF KLQG L S+ LSLPGRD +NL +G G AA A      G P   +A LGAG+L+SG LG HMTASIGGADMPVV+T+LNSYSGWALCAEGFMLN+ LLT VGALIGSSGAILT IMC+AMNRD+++V+ GG+GT +     + +  G          V+ L  +K+V+IVPGYGLAVA+AQYAIAEL   L   G+K  FGIHPVAGRMPGQLNVLLAEAGVPYDVV+E+ E
Sbjct:  785 VYLASVIGSITATGSVVAFGKLQGWLHSKALSLPGRDAINLGLGVGTAASAVGFGLAGSPEGALACLGAGSLLSGALGAHMTASIGGADMPVVVTVLNSYSGWALCAEGFMLNSPLLTTVGALIGSSGAILTHIMCKAMNRDIVSVLLGGYGTTSTGKGEAMKIEGEPTMTDVAQTVELLTNSKKVVIVPGYGLAVAKAQYAIAELVEKLHHHGIKTTFGIHPVAGRMPGQLNVLLAEAGVPYDVVQEMDE 1035          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: T2MDQ1_HYDVU (Proton-translocating NAD(P)(+) transhydrogenase n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2MDQ1_HYDVU)

HSP 1 Score: 300 bits (769), Expect = 2.350e-90
Identity = 157/251 (62.55%), Postives = 189/251 (75.30%), Query Frame = 1
Query:    1 IYLAAAIGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            IY    IG +T TGS+TAF KLQGLL+S PL+LPG++  N+AMG          + T DP   I  LGA + +S  +G HMTASIGGADMPVVIT+LNSYSGWALCAEGFMLNN+LLTIVGAL+G SG IL+ IMC+AMNR L NV+ GG+GT+   +    +  G H E   +  V+ +A AK +IIVPGYGLAVA+AQYAIAE+ ++L +KG+ VRFGIHPVAGRMPGQLNVLLAEAGVPYDVV E+ E
Sbjct:  734 IYAGTFIGGVTFTGSLTAFGKLQGLLASAPLNLPGKNFYNIAMGTASVGALGVFMNTNDPSLGIPMLGAASALSATMGVHMTASIGGADMPVVITVLNSYSGWALCAEGFMLNNDLLTIVGALVGFSGGILSYIMCKAMNRSLTNVLFGGYGTLTSGTGEKMKITGTHTEINVNSTVELIANAKNIIIVPGYGLAVAKAQYAIAEMVKILREKGINVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVLEMDE 984          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A6U9RDM2_9CHLO (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RDM2_9CHLO)

HSP 1 Score: 297 bits (761), Expect = 2.550e-90
Identity = 160/245 (65.31%), Postives = 187/245 (76.33%), Query Frame = 1
Query:   19 IGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            IGA+T TGS+ AFAKLQGL+ S PLSLPG++ LN+ M  G A  AA  +A GD     A LG    +SGLLG H+ +SIGGADMPVVIT+LNSYSGWALCAEGFMLNN+LLT+VGALIGSSG IL+ IMC+AMNR L NVI GG GT  K    + + GG HRE  +D  V +L +AK++IIVPGYG+AVA AQYAI+E+   L + G  VRF IHPVAGRMPGQLNVLLAEAGVPYDVV E+ E
Sbjct:  563 IGAVTLTGSLVAFAKLQGLMKSSPLSLPGKNLLNIGMLAGNAGCAAGFMAAGDVATGTAMLGTTTGISGLLGWHLVSSIGGADMPVVITVLNSYSGWALCAEGFMLNNDLLTVVGALIGSSGGILSYIMCKAMNRSLTNVIFGGIGTSAKPKGEAMKVGGDHREVDSDGAVAQLLDAKDIIIVPGYGVAVAHAQYAISEMVDKLREHGANVRFAIHPVAGRMPGQLNVLLAEAGVPYDVVHEMEE 807          
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Match: A0A7S2ELG3_TRICV (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ELG3_TRICV)

HSP 1 Score: 282 bits (721), Expect = 3.100e-90
Identity = 162/255 (63.53%), Postives = 190/255 (74.51%), Query Frame = 1
Query:   19 IGAITATGSVTAFAKLQGLLSSQPLSLPGRDQLNLAMGGGIAAGAAALLATG-------DPGQM-IAALGAGALVSGLLGTHMTASIGGADMPVVITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRDLLNVISGGFGTI--NKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGYGLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEELGE 753
            IG ITATGS+ AF KL G+L  +PLSLPGRD LNLAM    AAG AA L+         DP  + +A+LG  A VS ++G H+TASIGGADMPVVIT+LNSYSGWALCAEGFML N LL  VGALIG SGAILT IMC+AM RD+++VI GG GT    K+   SD P G    AT D V + LAEAK ++IVPGYGLAVA+AQ++IA++ + L  +G  VRFGIHPVAGRMPGQLNVLLAEAGVPYD+V E+ E
Sbjct:    1 IGGITATGSMVAFGKLAGMLDPKPLSLPGRDALNLAMLTTCAAGMAAFLSPALGADVISDPESLRLASLGLVAAVSSVMGLHLTASIGGADMPVVITVLNSYSGWALCAEGFMLGNPLLAQVGALIGFSGAILTWIMCEAMGRDIVSVILGGAGTAAPKKIEGDSDGPVGEVHIATVDNVAETLAEAKNIVIVPGYGLAVAQAQFSIADIAKKLRAEGKNVRFGIHPVAGRMPGQLNVLLAEAGVPYDMVLEMDE 255          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9550.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMZ8_9PHAE1.200e-11578.26Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A1D2AEE8_AUXPR2.670e-9465.20Proton-translocating NAD(P)(+) transhydrogenase (F... [more]
W7U3Y9_9STRA3.270e-9364.94Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A7S3CBX0_9CHLO1.270e-9260.96Proton-translocating NAD(P)(+) transhydrogenase (F... [more]
A0A3M7KUV2_AUXPR1.520e-9265.20Proton-translocating NAD(P)(+) transhydrogenase (F... [more]
A0A7S3FG00_9VIRI1.010e-9164.52NAD(P) transhydrogenase subunit beta n=1 Tax=Prasi... [more]
A0A4D9DBW7_9STRA4.630e-9164.94Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
T2MDQ1_HYDVU2.350e-9062.55Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A6U9RDM2_9CHLO2.550e-9065.31Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A7S2ELG3_TRICV3.100e-9063.53Proton-translocating NAD(P)(+) transhydrogenase n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9550contigC-tenellus_contig9550:482..4540 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3075.A0A087SMW3
PFAMsAAA
Model size967
Max annot lvl2759|Eukaryota
KEGG rclassRC00001
KEGG koko:K00323
KEGG ReactionR00112
KEGG Pathwayko00760,ko01100,map00760,map01100
Hectar predicted targeting categorysignal peptide
Exons6
Evalue4.97e-76
EggNOG OGsCOG0464@1|root,KOG0737@2759|Eukaryota
EC1.6.1.2
DescriptionATP binding
Cds size636
COG categoryO
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9550.1.1prot_C-tenellus_contig9550.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9550 687..3656 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790183.862342-UTR-C-tenellus_contig9550:481..6861680790183.862342-UTR-C-tenellus_contig9550:481..686Choristocarpus tenellus KU2346UTRC-tenellus_contig9550 482..686 -
1680790183.945602-UTR-C-tenellus_contig9550:3656..37131680790183.945602-UTR-C-tenellus_contig9550:3656..3713Choristocarpus tenellus KU2346UTRC-tenellus_contig9550 3657..3713 -
1680790183.95941-UTR-C-tenellus_contig9550:4471..45401680790183.95941-UTR-C-tenellus_contig9550:4471..4540Choristocarpus tenellus KU2346UTRC-tenellus_contig9550 4472..4540 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790183.875783-CDS-C-tenellus_contig9550:686..8001680790183.875783-CDS-C-tenellus_contig9550:686..800Choristocarpus tenellus KU2346CDSC-tenellus_contig9550 687..800 -
1680790183.890887-CDS-C-tenellus_contig9550:1252..13481680790183.890887-CDS-C-tenellus_contig9550:1252..1348Choristocarpus tenellus KU2346CDSC-tenellus_contig9550 1253..1348 -
1680790183.9058995-CDS-C-tenellus_contig9550:2154..22841680790183.9058995-CDS-C-tenellus_contig9550:2154..2284Choristocarpus tenellus KU2346CDSC-tenellus_contig9550 2155..2284 -
1680790183.9211538-CDS-C-tenellus_contig9550:2798..29151680790183.9211538-CDS-C-tenellus_contig9550:2798..2915Choristocarpus tenellus KU2346CDSC-tenellus_contig9550 2799..2915 -
1680790183.934591-CDS-C-tenellus_contig9550:3477..36561680790183.934591-CDS-C-tenellus_contig9550:3477..3656Choristocarpus tenellus KU2346CDSC-tenellus_contig9550 3478..3656 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9550.1.1

>prot_C-tenellus_contig9550.1.1 ID=prot_C-tenellus_contig9550.1.1|Name=mRNA_C-tenellus_contig9550.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=212bp
MGGGIAAGAAALLATGDPGQMIAALGAGALVSGLLGTHMTASIGGADMPV
VITLLNSYSGWALCAEGFMLNNNLLTIVGALIGSSGAILTQIMCQAMNRD
LLNVISGGFGTINKVSDLSDEPGGVHREATADMVVQKLAEAKEVIIVPGY
GLAVARAQYAIAELTRVLSDKGVKVRFGIHPVAGRMPGQLNVLLAEAGVP
YDVVEELGEEG*
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mRNA from alignment at C-tenellus_contig9550:482..4540-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9550.1.1 ID=mRNA_C-tenellus_contig9550.1.1|Name=mRNA_C-tenellus_contig9550.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4059bp|location=Sequence derived from alignment at C-tenellus_contig9550:482..4540- (Choristocarpus tenellus KU2346)
ATTTACCTTGCTGCCGCAATTGGTGCCATAACTGCTACAGGATCAGTCAC TGCCTTTGCTAAGCTGCAGGTGTGGCCTTACTTGTAATCTCCTACAGTGA GAACGGGGGGGGGGGGGGGGCTCAAATGCTAATAATCAAATGCTAATAAT CAGGTCACATTTTTTTAGCGATAGGAGTTTTTATTTTTTTGTTAATTTAG AATTATTTTGTGTGTGAACCTGGGTAAATCTATAATTTTTCTTTCTTTCT TTTTGTGTGATGAGGTAGGATTTGTTGTGGAGTGCACTGGTTGAGACGGT TTGTTGTATGTTGTATGTTGCATGTTGCATGTTGTATGTTGTATGTTGTA TGTTGTATGTTGCATGTTGTATGTTGTATGTTGTATGTTGCATGACTAGG CAATTCGATCAGTAAATAATATTAGCACATGGTCTGTGTTTTTATCACCA AGGGGGTATGAACACTATTGTGGATGAAAATGGTGTCAGGTGCTTTCCCA ATCACTTCTTGGAAGTAAAACTTTTGAAGCACGAGTTTTTTTTTTTAACA CATTTACTTTTTTTTGTGACAATAATTACATCAAGTATTCAGGAGTATAT ATATACACACAAGACAAAAATAAAAAATAATGTGTATCTGTTTATTTTGT GAGAGAGGAAATTCATACATAATGAAACCTTTTTTTTTAATATTCCAAAA TACGTACTCCCAATATTTATCGATCTTATCAACTCGACATGCAAACTTTA CCTATCCTATGTCTCCTTTGTCCTGTGCATGTATACTCATACGTGCATAC ACATGTTGTTAAATAAAAAAAATGCAGGGTCTTCTGAGCTCGCAGCCGCT GTCGCTCCCCGGGCGAGATCAGCTCAACCTAGCCATGGGAGGCGGGATTG CAGCAGGGGCAGCAGCTCTTCTTGCCACAGGGGACCCTGGGCAGATGATA GCTGCTCTCGGCGCGGGGGCTTTAGTGTCGGGCCTATTGGGTACACACAT GACAGCATCCATTGGTGGGGCGGATATGCCGGTGGTGATAACGCTGTTGA ACAGTTACAGTGGGTGAGAAGAGTTTTTTGGTTTATTTTGAGAGTTGGTA GGGAGGGGTTGGGTTGGGTTGAGTTGGGTTGAGTTGGGAAAGTGGTTGTT CTGTTGATGTTTGGTTTATCGTGGCGAGTGTGTGTGGATTGGAGAGGAAG GGGTCTGAGGGTTGTGTGCTGGATTTGTTTTTTTGTTGTAGGTGGTAGCA AATAGGTAGTAGCAATTAGGGGGTCTGTAGTACATTGGTAGGCGTATGAT GATTGTACTTTGTTTTTTGTTTATATTTTTTCAAGTATCGAATGTGGATT ACATCAGTAGTGCTGACATATATATTATATATATATATATTTAACCATTG TGTAAGATGTTTAATACCCTCAGTTGGGTCTCCTAATCAGAGGTCTCGTG TCTTGACTTTTTTGTTTTTATGTTAATGGTTTTCAAGAGTTAGGGTTGGC GTTGAGGGTGCACCCAGGCACTACCATAGACTTATCAAAGATTACTTCCC CCTCACGAATTCCCCTCTTTCACCACGTCTCTTGTCTCCTCTTGTTTCCA TTGCTTCACTGTCTGGTATGGTTAGGTGGGCTCTGTGTGCAGAAGGCTTC ATGCTGAACAACAACCTTCTCACAATTGTTGGTGCTCTCATTGGGTCCTC CGGTGCTATCCTGACACAGATAATGTGCCAGGCCATGAACAGGTCAGTGT GTAGATTTGTTTTCAGGACTGAATCAGAGTAGAGTTGAAGTTTTTGAAGT TTTTCTCCTATTTTACAGACGTCTGACTCCTAAACAGGCCTGTTTACATT TTTCTTCCCAACCTACATACGTGTTTTATGATTGACAACTGTCCCTAAAC CTGCCCTCACCATCCTTGCATTTGTTGATGAGGGCTAGTGCACACAGACA TGCTTGCAGTCAGTGTTGCACACCATTAATAGCAATACCCAGATACCCTG GAAGCTGTGGCATGGTAATATTTACCAGTGTGCCTTCGGGGGAATTTTTT TTGTATGAAAGAGTGAGATAGATAATTCCTCTTTTTATTTTTATTTTTGT GTTACTATTTGAAATATTAATACCACCTTTTTTATTGTTATTGTTTAATC ATAGTACACTTTTTTTTGTCAACACGTATACAATAAATCTACTGAGTGTG TGTGTGTGTGTTTTGTTCATTGGTTCAATTTTACCGGCTCTTTTCTTGTG CGACAGGGATCTCCTCAACGTCATCTCTGGCGGGTTTGGTACAATCAACA AGGTATCTGACTTGTCGGATGAACCAGGAGGTGTTCACCGAGAGGCTACT GCAGACATGGTGGTACAAAAGCTTGCGGAAGCAAAGGTACGGTTCATTTT TTTATTTTTTTATTGTGTTTCATTGAACTAACTCCAGTGTTGAACAGTTA GGTGGAAAAAAGACAATTTTGGGAATTACAATTTTGCCCACCTGGGTAGT AACCCTATACCGGGTAGTAACCCTATACCACAACTCTGCGTAGTAGCACT TTGAGTGGCATTAAAATTGGATTACATTACATTACATTACAATAGCATTA CATTACAATTGGATTACATTACATTGCATTACATTACAATTGGATTGCAT TACATTAGATTACAGTTGGATTACATTACATTACATTACATTACATTACA ATTGGATTACATTGCATTACATTACAATTGCATTACATTACATTACACTA CAATTGGATTACATTACATTAGATTACATTTGCCTGTTTATGTTTTTTTT GTATGCGGAGTCTCTGCGAGTGTATCCACTGTAATGTTAATAATGTTAAT GATGTTAATGATGTTTCCGGCAGTTGTAGTGCAGACTCTTACACTCATGA AGCACTGCGTTTGGCGAGGGATATCCTCTCCGTGTGGTGGAGATGCCTGT GTGATTGGTGTTTTCATTAGTTGTGAAAACCTAGGGTTAGGGTTAGGGTT AGGGTTGTGACCGACCAAGGTCAAGAAAGCCAAGCAATGTTGATGATGCT TTTTTGTACAGCTGTGTGTGTGTGTAAAATTTGTATCTGTATGGACAGAC AAGTCCTGTGAGGATATACGGTGCTAATGTGCTAAATCTGAATGGTCTCT CCCTCTCACATTTGGTACACCCCATAACATTTGGTATTGCAGGAGGTGAT TATAGTCCCTGGATATGGACTGGCTGTTGCACGGGCACAGTACGCCATTG CAGAGCTGACCAGAGTGCTCTCAGACAAAGGTGTCAAGGTAAGTTATGGT ATACTTACATATATGCATGCATGCATGCATGCATGCATATATATATAAAA CATTAACACACACATGCAGACATGCACATCTCTATGATAGAACTGCGTAC ACTTTTATGCACATACTTTTAGCATGGATACAAAGGTAGCATTATGACAA TAAACATTGTGAGTATATATGTATTGGTACAGTAGGAGAGTAAAAATAAA AATCCCCCTCCCCCCAAAAATATTGACTTTTGTAAGTAGGGCTTATCAGA TGCGTAGACTTCAGAGGCATAGAAAAGTAGAGTCAGGTTTAGGGTTAGGG TCTGTGCAGGATGAACGCACCCTATTGTGAAGTTTGCTTAGGGTTAGGGC AACATTATTGCTAGTACTTTGAAAAAGGGTTCTGTTTTTTTTTAAAGTCA GGTACTCTCAATCTGGTGTCTACTCTCTTGTATGGATCAGGTGCGGTTTG GTATTCACCCTGTAGCAGGACGAATGCCTGGGCAGTTGAATGTTCTTCTG GCAGAGGCTGGTGTTCCATACGACGTTGTCGAGGAACTAGGTGAGGAAGG GTGAGAGTCTGTTGTCACTGTTGTAACTGTTGGATTGTGATTTACTTACG GTTGTGGTGGGTGATCTTGTATTTCAGGTTGTTGTTGAACTCTGCTGAGC GATTTCTTTTTGTTTGACTTCATTCTATTTTTTTATCTTATGCTCTTTTA ATGGATGATTGATTTTGATTGATTTTGAAATGTCACGGAAAGTTCTCGAC CCAACATGT
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Coding sequence (CDS) from alignment at C-tenellus_contig9550:482..4540-

>mRNA_C-tenellus_contig9550.1.1 ID=mRNA_C-tenellus_contig9550.1.1|Name=mRNA_C-tenellus_contig9550.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=636bp|location=Sequence derived from alignment at C-tenellus_contig9550:482..4540- (Choristocarpus tenellus KU2346)
ATGGGAGGCGGGATTGCAGCAGGGGCAGCAGCTCTTCTTGCCACAGGGGA
CCCTGGGCAGATGATAGCTGCTCTCGGCGCGGGGGCTTTAGTGTCGGGCC
TATTGGGTACACACATGACAGCATCCATTGGTGGGGCGGATATGCCGGTG
GTGATAACGCTGTTGAACAGTTACAGTGGGTGGGCTCTGTGTGCAGAAGG
CTTCATGCTGAACAACAACCTTCTCACAATTGTTGGTGCTCTCATTGGGT
CCTCCGGTGCTATCCTGACACAGATAATGTGCCAGGCCATGAACAGGGAT
CTCCTCAACGTCATCTCTGGCGGGTTTGGTACAATCAACAAGGTATCTGA
CTTGTCGGATGAACCAGGAGGTGTTCACCGAGAGGCTACTGCAGACATGG
TGGTACAAAAGCTTGCGGAAGCAAAGGAGGTGATTATAGTCCCTGGATAT
GGACTGGCTGTTGCACGGGCACAGTACGCCATTGCAGAGCTGACCAGAGT
GCTCTCAGACAAAGGTGTCAAGGTGCGGTTTGGTATTCACCCTGTAGCAG
GACGAATGCCTGGGCAGTTGAATGTTCTTCTGGCAGAGGCTGGTGTTCCA
TACGACGTTGTCGAGGAACTAGGTGAGGAAGGGTGA
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