mRNA_C-tenellus_contig7857.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: D8LLZ8_ECTSI (4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ8_ECTSI) HSP 1 Score: 291 bits (744), Expect = 2.310e-91 Identity = 180/342 (52.63%), Postives = 214/342 (62.57%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGKVEAVEIHTKKGNPERFQELWES-IGAAASR--LKLVAVSFPDLGEDTNLAMSTMNTVMH-GNGRDIWGLRGECG--SSGRSCGVKDEG------GAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSAL----------------------GLRGLGGVAYGGYARKVVGRVLDQLP-EGSNCVEEHPKVLLEALAIARGLVEGLE 921 CE+VCPADAVVFPDS PPP R +V + L GGVL RCYGCGRCI+VCPPGII A KY R V LL KV+ VEIHTK GN F+ELWE + AAASR ++VAVSFPDLG+DT LA++TM VM G R+ G GE +S R G + E G +ALN+WQTDGRPMSGDIG GAT+ACIR A KVL+++A+PFG+GQHFVQLAGGTN+ TA +LRE+GL+ GG S R +GGVAYGGYARK VGR LD+LP +G+ VE+HP+VL AL A LV GL+ Sbjct: 199 CETVCPADAVVFPDSAPPPAHRAAMVGELLRASAGGGVLGPRCYGCGRCINVCPPGIIRAEKYKRSPGVVRELLEKVDGVEIHTK-GNLASFRELWEECVAAAASRPQFRVVAVSFPDLGDDTGLAVATMGAVMDSGPRRERRGGGGEGSEATSARKRGTEFEVAGEQKMGGRALNVWQTDGRPMSGDIGTGATAACIRLAEKVLDTRALPFGEGQHFVQLAGGTNDRTAHRLREMGLIGHDYDGGXXXXXXXXXXXXXXXSSDCRSQNRSQDHXXXXXXXXXXWQESRRRVGGVAYGGYARKTVGRALDRLPGKGAGRVEDHPEVLSAALREASLLVRGLK 539
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: A0A835Z7A0_9STRA (4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A0_9STRA) HSP 1 Score: 194 bits (494), Expect = 4.370e-56 Identity = 129/309 (41.75%), Postives = 160/309 (51.78%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIR-CYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGKVEAVEIHTKKGNPERFQELWESIGAAA-SRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLDQLPEGSNCVEEHPKVLLEALAIARGLVEGLE 921 CE VCPA A+ FPD ++R CYGCGRCI VCPPGII+A Y+R V LL VEA+E+HTK G+ + F++LW IG A + L+ V++SFPD+GE+T + V+ G GV L IWQTDGRPMSGDIG G A + FA KVL S A+PFG G+H VQLAGGTN T P+L+ +GLL G GG+ G A+GGYARKVV L +LP+ VE+ VL AL AR LV L+ Sbjct: 126 CERVCPAQAIAFPD-------------------------EVRGCYGCGRCIPVCPPGIIDAVTYLRTPADVLPLLDMVEAIEVHTK-GDVQAFRDLWAHIGPEADTTLRAVSISFPDMGEETPEYLQQWADVLQG-------------------GV-------GLRIWQTDGRPMSGDIGKGTALASVAFAEKVLKSGALPFGAGRHHVQLAGGTNAATVPRLQAMGLL------GSSDAGGAKAS---------------GAAFGGYARKVVSDWLQRLPDDCTKVEQDLGVLRGALLAARELVAPLK 361
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: A0A835US01_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835US01_VANPL) HSP 1 Score: 188 bits (477), Expect = 1.550e-53 Identity = 129/309 (41.75%), Postives = 169/309 (54.69%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVA--KHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLDQLPEGSNCV--EEHPKVLLEALAIARGLV 909 CE VCPA+A++ + L D + + K GGV+ RCYGCGRC VCP I A+ Y+R + LL + V+A+EIHT + F+ELW S+G + + +KLVAVS PD+G NL STMNTV I R N+WQ DGRPMSGDIG GAT I FA ++ + P G F QLAGGTN+HT L++LGL G SS+ + DS + +GG+AYGGYARK+VG+VLD+LP NCV E++P+ L+EAL A L+ Sbjct: 18 CEKVCPANAILLEE-----LSTGDQSPCNSNASSKLQGGVVTERCYGCGRCFPVCPYDKIRAKAYIRDSISTCELLKRDDVDAMEIHTTGRRIDLFEELWHSLGNSINYVKLVAVSLPDMG---NLTFSTMNTVY-----SIMKSR------------------LGYNLWQLDGRPMSGDIGRGATREAISFAVRLGGMKERPHG----FYQLAGGTNSHTVDGLKKLGLFQAMS------HGKSSVDD--VDDSEKAI--IGGIAYGGYARKIVGQVLDKLPTQHNCVLIEDYPEYLMEALTKALTLL 281
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: UPI0009E5040C (uncharacterized protein LOC110017905 isoform X1 n=4 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E5040C) HSP 1 Score: 189 bits (481), Expect = 2.020e-53 Identity = 124/307 (40.39%), Postives = 163/307 (53.09%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLDQLPEGSNC--VEEHPKVLLEALAIARGLV 909 CE VCPA+A++ S + + + +D+ GGV+ RCYGCGRC VCP I A+ Y+R A + LL + V+A+EIHT + F ELW+++G + +KLVAVS PD+G T M M+T+M E N+WQ DGRPMSGDIG GAT I FA ++ P G F QLAGGTN HT L+++GL G GG I DSA L +GG+AYGGYARK+V RVL +LP C +E++P+ L+EAL A LV Sbjct: 151 CEKVCPANAILLKKSS---TGQHSLGSSDASDRLQGGVVTERCYGCGRCFPVCPFDKIRAKTYIRETAATSELLKRNDVDAIEIHTTGRHIHLFNELWDTLGTSIKHVKLVAVSMPDIGNSTFSTMQDMHTIM-------------------------ESRLLGYNLWQLDGRPMSGDIGRGATREAINFAMRLAAIPDKPHG----FYQLAGGTNLHTIDCLKKVGLFKAIKFSGTGG----------IADSAQAL--IGGIAYGGYARKIVARVLHKLPTQPGCMLIEDYPEYLMEALREALTLV 413
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: A0A2C9UCM7_MANES (Uncharacterized protein n=3 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UCM7_MANES) HSP 1 Score: 187 bits (475), Expect = 1.810e-52 Identity = 124/307 (40.39%), Postives = 159/307 (51.79%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLD--QLPEGSNCVEEHPKVLLEALAIARGLV 909 CE+VCPADA+ + P ++ GGV+ RCYGCGRC +CP I Y+R A A LL + V+A+EIHT F+ELW+ +G + LKL+AVS P G+ T +M+TM +VM E + LN+WQ DGRPMSGDIG G T I FA ++ + + P G F QLAGGTN HT L+ GL V GSS + + S +GG+AYGGYARK+VGRVL Q G C+E+HP+ LLEAL A GLV Sbjct: 158 CENVCPADAISLEEDKSPAHFSYGTKMLNVL---KGGVITERCYGCGRCFPICPYDKIRVATYVRDAIATAELLKRNDVDAIEIHTSGRQMASFKELWDGLGDSLGCLKLLAVSLPYAGDATVSSMNTMYSVM-------------------------EPQLKCLNLWQLDGRPMSGDIGRGTTRESIAFAVRLAAANSRPHG----FFQLAGGTNAHTVDGLKREGLFQ------TAVVAGSSKENKSVASSPCSNSLIGGIAYGGYARKIVGRVLRSMQSQHGLACIEDHPEHLLEALTEALGLV 426
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: I1HLK2_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HLK2_BRADI) HSP 1 Score: 186 bits (471), Expect = 4.470e-52 Identity = 122/314 (38.85%), Postives = 161/314 (51.27%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVAKH-----LADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRG--LGGVAYGGYARKVVGRVLDQLPE--GSNCVEEHPKVLLEALAIARGLV 909 CE VCPADA+ L+RV V +H L+DK GGV+ RCYGCGRC+ VCP I A Y+R A LL + V+A+EIHT + F LW S+G + + +KLVAVS P+ GE T M+ ++T+M + N+WQ DGRPMSGDIG GAT + FA + + P G F QLAGGTN +T L+ GL ++ PG G + +GG+AYGGYARK++GR+L ++P G +E+HP LLEAL A LV Sbjct: 144 CEKVCPADAIS--------LKRVVVGGEHAHSDPLSDKLEGGVIMQRCYGCGRCLSVCPYDRISAMSYIRDPTMTAELLKRSDVDAIEIHTTGKGTDMFSILWSSLGESINSVKLVAVSLPNAGESTIDFMNAIHTIMQSY-------------------------REGYNLWQLDGRPMSGDIGRGATRETVSFAVDLTSMSDRPQG----FYQLAGGTNLYTVDSLKNAGLFK------------ATTLPGTTTTEKFGSQQALIGGIAYGGYARKIIGRILRKIPVQLGRMRIEDHPGYLLEALQEAMSLV 408
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: UPI001F5D09B9 (uncharacterized protein LOC124646688 n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D09B9) HSP 1 Score: 186 bits (471), Expect = 4.570e-52 Identity = 123/314 (39.17%), Postives = 158/314 (50.32%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVAKH-----LADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRG--LGGVAYGGYARKVVGRVLDQLPEGSNC--VEEHPKVLLEALAIARGLV 909 CE VCPADA+ L RV V +H + DK GGV+ RCYGCGRC+ VCP I A Y+R A LL + V+A+EIHT + F LW S+G + + +KLVAVS P+ GE T M+ + T+M + N+WQ DGRPMSGDIG GAT + FA + + P G F QLAGGTN +T L++ GL + PG +G + +GG+AYGGYARK+VGRVL ++P C +E HP LLEAL A LV Sbjct: 145 CEKVCPADAIS--------LNRVMVGGEHAQSDPVCDKLEGGVIVQRCYGCGRCLSVCPYDRIRAVSYVRDPATTAELLKRSDVDAIEIHTTGKGTDMFSTLWNSLGESVNNVKLVAVSLPNAGESTINFMNVIYTIMQSR-------------------------VEGYNLWQLDGRPMSGDIGRGATRETVSFAVDLTSLPDRPPG----FYQLAGGTNLYTVDCLKKAGLFKAR------------TLPGTTTTQKIGSQEALIGGIAYGGYARKIVGRVLHKIPSQVGCMRIENHPGYLLEALQEALSLV 409
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: B8A1D4_MAIZE (Uncharacterized protein n=2 Tax=Andropogoneae TaxID=147429 RepID=B8A1D4_MAIZE) HSP 1 Score: 182 bits (461), Expect = 1.050e-51 Identity = 121/307 (39.41%), Postives = 159/307 (51.79%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLDQLPE--GSNCVEEHPKVLLEALAIARGLV 909 CE VCPADA+ S + ++ L K GGV+ RCYGCGRC+ VCP I A Y+R A LL + V+A EIHT + F LW+++ + + +KLVAVS PD+GE T M+T+ T+M + + N+WQ DGRPMSGDIG GAT + FA V + P G F QLAGGTN++T L++ GL + S + S L +GG+AYGGYARK+VGRVL ++PE G +E+HP LLEAL A LV Sbjct: 31 CEKVCPADAISLKHSM---VDGERTLSDPLRGKYEGGVITERCYGCGRCLPVCPYDRIRAVSYVRDPTMTAELLKRDDVDATEIHTTGKGTDMFNTLWDNLSGSINNVKLVAVSLPDIGESTVDLMNTIYTIMEPH-------------------------FKGYNLWQLDGRPMSGDIGRGATRETVSFAAHVASMSERPPG----FYQLAGGTNSYTVDYLKKAGLF-------QSSNWNSGTATSEMASSHQAL--IGGIAYGGYARKIVGRVLRKIPEQFGRVHIEDHPDHLLEALQEAMSLV 296
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: M8C3I1_AEGTA (Uncharacterized protein n=4 Tax=Triticinae TaxID=1648030 RepID=M8C3I1_AEGTA) HSP 1 Score: 181 bits (459), Expect = 1.210e-51 Identity = 121/310 (39.03%), Postives = 158/310 (50.97%), Query Frame = 1 Query: 13 CPADAVVFPDSPPPPLQRVDVVAKH-----LADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRG--LGGVAYGGYARKVVGRVLDQLPE--GSNCVEEHPKVLLEALAIARGLV 909 CPADA+ L+RV V +H + DK GGV+ RCYGCGRC+ VCP I A Y+R A LL + V+A+EIHT + F LW S+G + + +KLVAVS P+ G T M+ + T+M N + N+WQ DGRPMSGDIG GAT + FA + + P G F QLAGGTN +T L++ GL + PG +G + +GG+AYGGYARK+VGRVL ++P G C+E+HP LLEAL A LV Sbjct: 26 CPADAIS--------LKRVMVGGEHAQSDPICDKLEGGVIMERCYGCGRCLSVCPYDRIRAMPYVRDPATTAELLKRSDVDAIEIHTTGKGIDMFNTLWNSLGESINNVKLVAVSLPNAGASTIDFMNAIYTIMQSN-------------------------LEGYNLWQLDGRPMSGDIGRGATRETVSFAVDLTSVPDRPLG----FYQLAGGTNLYTVDCLKKAGLFKAR------------TLPGTRTTEKVGSQEALIGGIAYGGYARKIVGRVLRKIPSELGRVCIEDHPGYLLEALQEALSLV 286
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: A0A2P5CV86_PARAD (ABC transporter ABCE n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5CV86_PARAD) HSP 1 Score: 184 bits (466), Expect = 3.280e-51 Identity = 125/308 (40.58%), Postives = 163/308 (52.92%), Query Frame = 1 Query: 1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGL-GGVAYGGYARKVVGRVLD--QLPEGSNCVEEHPKVLLEALAIARGLV 909 C+ VCPA+A+ D + HL K GGVL RCYGCGRC VCP I Y+R A A L+ + V+A+EIHT F+ELW+ +G + L+LVAVS PD+GE T +M+TM ++M + LN+WQ DGRPMSGDIG GAT I FA ++ SQ P G F+QLAGGTN +T L++ GL K + +S S+ L+ L GVAYGGYARK+VGR+L Q +G+ +EEHP+ LL+AL A LV Sbjct: 147 CQKVCPANAISLEDRETMSQNLSHGASAHLGFK--GGVLTERCYGCGRCFPVCPYDKISVVTYIRDATATAELIIRDDVDALEIHTSGRQTSPFKELWDDLGDSIRYLRLVAVSLPDIGETTITSMNTMYSIMKPH-------------------------LHCLNLWQLDGRPMSGDIGRGATRESIAFALRLAASQERPNG----FLQLAGGTNAYTVDGLKKAGLFKTKSSFSD-----NSSDEKRKAGSSSSLQSLVAGVAYGGYARKIVGRILSTMQSQQGATHIEEHPEHLLQALKEAISLV 418 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7857.1.1 >prot_C-tenellus_contig7857.1.1 ID=prot_C-tenellus_contig7857.1.1|Name=mRNA_C-tenellus_contig7857.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=313bp CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIback to top mRNA from alignment at C-tenellus_contig7857:2..3420+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7857.1.1 ID=mRNA_C-tenellus_contig7857.1.1|Name=mRNA_C-tenellus_contig7857.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3419bp|location=Sequence derived from alignment at C-tenellus_contig7857:2..3420+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7857:2..3420+ >mRNA_C-tenellus_contig7857.1.1 ID=mRNA_C-tenellus_contig7857.1.1|Name=mRNA_C-tenellus_contig7857.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=939bp|location=Sequence derived from alignment at C-tenellus_contig7857:2..3420+ (Choristocarpus tenellus KU2346)back to top |