mRNA_C-tenellus_contig7857.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7857.1.1
Unique NamemRNA_C-tenellus_contig7857.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: D8LLZ8_ECTSI (4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ8_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 2.310e-91
Identity = 180/342 (52.63%), Postives = 214/342 (62.57%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGKVEAVEIHTKKGNPERFQELWES-IGAAASR--LKLVAVSFPDLGEDTNLAMSTMNTVMH-GNGRDIWGLRGECG--SSGRSCGVKDEG------GAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSAL----------------------GLRGLGGVAYGGYARKVVGRVLDQLP-EGSNCVEEHPKVLLEALAIARGLVEGLE 921
            CE+VCPADAVVFPDS PPP  R  +V + L     GGVL  RCYGCGRCI+VCPPGII A KY R    V  LL KV+ VEIHTK GN   F+ELWE  + AAASR   ++VAVSFPDLG+DT LA++TM  VM  G  R+  G  GE    +S R  G + E       G +ALN+WQTDGRPMSGDIG GAT+ACIR A KVL+++A+PFG+GQHFVQLAGGTN+ TA +LRE+GL+     GG                S                          R +GGVAYGGYARK VGR LD+LP +G+  VE+HP+VL  AL  A  LV GL+
Sbjct:  199 CETVCPADAVVFPDSAPPPAHRAAMVGELLRASAGGGVLGPRCYGCGRCINVCPPGIIRAEKYKRSPGVVRELLEKVDGVEIHTK-GNLASFRELWEECVAAAASRPQFRVVAVSFPDLGDDTGLAVATMGAVMDSGPRRERRGGGGEGSEATSARKRGTEFEVAGEQKMGGRALNVWQTDGRPMSGDIGTGATAACIRLAEKVLDTRALPFGEGQHFVQLAGGTNDRTAHRLREMGLIGHDYDGGXXXXXXXXXXXXXXXSSDCRSQNRSQDHXXXXXXXXXXWQESRRRVGGVAYGGYARKTVGRALDRLPGKGAGRVEDHPEVLSAALREASLLVRGLK 539          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: A0A835Z7A0_9STRA (4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A0_9STRA)

HSP 1 Score: 194 bits (494), Expect = 4.370e-56
Identity = 129/309 (41.75%), Postives = 160/309 (51.78%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIR-CYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGKVEAVEIHTKKGNPERFQELWESIGAAA-SRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLDQLPEGSNCVEEHPKVLLEALAIARGLVEGLE 921
            CE VCPA A+ FPD                         ++R CYGCGRCI VCPPGII+A  Y+R    V  LL  VEA+E+HTK G+ + F++LW  IG  A + L+ V++SFPD+GE+T   +     V+ G                   GV        L IWQTDGRPMSGDIG G   A + FA KVL S A+PFG G+H VQLAGGTN  T P+L+ +GLL      G    GG+                  G A+GGYARKVV   L +LP+    VE+   VL  AL  AR LV  L+
Sbjct:  126 CERVCPAQAIAFPD-------------------------EVRGCYGCGRCIPVCPPGIIDAVTYLRTPADVLPLLDMVEAIEVHTK-GDVQAFRDLWAHIGPEADTTLRAVSISFPDMGEETPEYLQQWADVLQG-------------------GV-------GLRIWQTDGRPMSGDIGKGTALASVAFAEKVLKSGALPFGAGRHHVQLAGGTNAATVPRLQAMGLL------GSSDAGGAKAS---------------GAAFGGYARKVVSDWLQRLPDDCTKVEQDLGVLRGALLAARELVAPLK 361          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: A0A835US01_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835US01_VANPL)

HSP 1 Score: 188 bits (477), Expect = 1.550e-53
Identity = 129/309 (41.75%), Postives = 169/309 (54.69%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVA--KHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLDQLPEGSNCV--EEHPKVLLEALAIARGLV 909
            CE VCPA+A++  +     L   D      + + K  GGV+  RCYGCGRC  VCP   I A+ Y+R   +   LL +  V+A+EIHT     + F+ELW S+G + + +KLVAVS PD+G   NL  STMNTV       I   R                     N+WQ DGRPMSGDIG GAT   I FA ++   +  P G    F QLAGGTN+HT   L++LGL            G SS+    + DS   +  +GG+AYGGYARK+VG+VLD+LP   NCV  E++P+ L+EAL  A  L+
Sbjct:   18 CEKVCPANAILLEE-----LSTGDQSPCNSNASSKLQGGVVTERCYGCGRCFPVCPYDKIRAKAYIRDSISTCELLKRDDVDAMEIHTTGRRIDLFEELWHSLGNSINYVKLVAVSLPDMG---NLTFSTMNTVY-----SIMKSR------------------LGYNLWQLDGRPMSGDIGRGATREAISFAVRLGGMKERPHG----FYQLAGGTNSHTVDGLKKLGLFQAMS------HGKSSVDD--VDDSEKAI--IGGIAYGGYARKIVGQVLDKLPTQHNCVLIEDYPEYLMEALTKALTLL 281          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: UPI0009E5040C (uncharacterized protein LOC110017905 isoform X1 n=4 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E5040C)

HSP 1 Score: 189 bits (481), Expect = 2.020e-53
Identity = 124/307 (40.39%), Postives = 163/307 (53.09%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLDQLPEGSNC--VEEHPKVLLEALAIARGLV 909
            CE VCPA+A++   S      +  + +   +D+  GGV+  RCYGCGRC  VCP   I A+ Y+R   A + LL +  V+A+EIHT   +   F ELW+++G +   +KLVAVS PD+G  T   M  M+T+M                         E      N+WQ DGRPMSGDIG GAT   I FA ++      P G    F QLAGGTN HT   L+++GL       G GG          I DSA  L  +GG+AYGGYARK+V RVL +LP    C  +E++P+ L+EAL  A  LV
Sbjct:  151 CEKVCPANAILLKKSS---TGQHSLGSSDASDRLQGGVVTERCYGCGRCFPVCPFDKIRAKTYIRETAATSELLKRNDVDAIEIHTTGRHIHLFNELWDTLGTSIKHVKLVAVSMPDIGNSTFSTMQDMHTIM-------------------------ESRLLGYNLWQLDGRPMSGDIGRGATREAINFAMRLAAIPDKPHG----FYQLAGGTNLHTIDCLKKVGLFKAIKFSGTGG----------IADSAQAL--IGGIAYGGYARKIVARVLHKLPTQPGCMLIEDYPEYLMEALREALTLV 413          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: A0A2C9UCM7_MANES (Uncharacterized protein n=3 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UCM7_MANES)

HSP 1 Score: 187 bits (475), Expect = 1.810e-52
Identity = 124/307 (40.39%), Postives = 159/307 (51.79%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLD--QLPEGSNCVEEHPKVLLEALAIARGLV 909
            CE+VCPADA+   +   P          ++     GGV+  RCYGCGRC  +CP   I    Y+R   A A LL +  V+A+EIHT       F+ELW+ +G +   LKL+AVS P  G+ T  +M+TM +VM                         E   + LN+WQ DGRPMSGDIG G T   I FA ++  + + P G    F QLAGGTN HT   L+  GL           V GSS +   +  S      +GG+AYGGYARK+VGRVL   Q   G  C+E+HP+ LLEAL  A GLV
Sbjct:  158 CENVCPADAISLEEDKSPAHFSYGTKMLNVL---KGGVITERCYGCGRCFPICPYDKIRVATYVRDAIATAELLKRNDVDAIEIHTSGRQMASFKELWDGLGDSLGCLKLLAVSLPYAGDATVSSMNTMYSVM-------------------------EPQLKCLNLWQLDGRPMSGDIGRGTTRESIAFAVRLAAANSRPHG----FFQLAGGTNAHTVDGLKREGLFQ------TAVVAGSSKENKSVASSPCSNSLIGGIAYGGYARKIVGRVLRSMQSQHGLACIEDHPEHLLEALTEALGLV 426          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: I1HLK2_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HLK2_BRADI)

HSP 1 Score: 186 bits (471), Expect = 4.470e-52
Identity = 122/314 (38.85%), Postives = 161/314 (51.27%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVAKH-----LADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRG--LGGVAYGGYARKVVGRVLDQLPE--GSNCVEEHPKVLLEALAIARGLV 909
            CE VCPADA+         L+RV V  +H     L+DK  GGV+  RCYGCGRC+ VCP   I A  Y+R     A LL +  V+A+EIHT     + F  LW S+G + + +KLVAVS P+ GE T   M+ ++T+M                             +  N+WQ DGRPMSGDIG GAT   + FA  + +    P G    F QLAGGTN +T   L+  GL              ++  PG       G +   +GG+AYGGYARK++GR+L ++P   G   +E+HP  LLEAL  A  LV
Sbjct:  144 CEKVCPADAIS--------LKRVVVGGEHAHSDPLSDKLEGGVIMQRCYGCGRCLSVCPYDRISAMSYIRDPTMTAELLKRSDVDAIEIHTTGKGTDMFSILWSSLGESINSVKLVAVSLPNAGESTIDFMNAIHTIMQSY-------------------------REGYNLWQLDGRPMSGDIGRGATRETVSFAVDLTSMSDRPQG----FYQLAGGTNLYTVDSLKNAGLFK------------ATTLPGTTTTEKFGSQQALIGGIAYGGYARKIIGRILRKIPVQLGRMRIEDHPGYLLEALQEAMSLV 408          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: UPI001F5D09B9 (uncharacterized protein LOC124646688 n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D09B9)

HSP 1 Score: 186 bits (471), Expect = 4.570e-52
Identity = 123/314 (39.17%), Postives = 158/314 (50.32%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVAKH-----LADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRG--LGGVAYGGYARKVVGRVLDQLPEGSNC--VEEHPKVLLEALAIARGLV 909
            CE VCPADA+         L RV V  +H     + DK  GGV+  RCYGCGRC+ VCP   I A  Y+R     A LL +  V+A+EIHT     + F  LW S+G + + +KLVAVS P+ GE T   M+ + T+M                             +  N+WQ DGRPMSGDIG GAT   + FA  + +    P G    F QLAGGTN +T   L++ GL   +              PG      +G +   +GG+AYGGYARK+VGRVL ++P    C  +E HP  LLEAL  A  LV
Sbjct:  145 CEKVCPADAIS--------LNRVMVGGEHAQSDPVCDKLEGGVIVQRCYGCGRCLSVCPYDRIRAVSYVRDPATTAELLKRSDVDAIEIHTTGKGTDMFSTLWNSLGESVNNVKLVAVSLPNAGESTINFMNVIYTIMQSR-------------------------VEGYNLWQLDGRPMSGDIGRGATRETVSFAVDLTSLPDRPPG----FYQLAGGTNLYTVDCLKKAGLFKAR------------TLPGTTTTQKIGSQEALIGGIAYGGYARKIVGRVLHKIPSQVGCMRIENHPGYLLEALQEALSLV 409          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: B8A1D4_MAIZE (Uncharacterized protein n=2 Tax=Andropogoneae TaxID=147429 RepID=B8A1D4_MAIZE)

HSP 1 Score: 182 bits (461), Expect = 1.050e-51
Identity = 121/307 (39.41%), Postives = 159/307 (51.79%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGLGGVAYGGYARKVVGRVLDQLPE--GSNCVEEHPKVLLEALAIARGLV 909
            CE VCPADA+    S    +     ++  L  K  GGV+  RCYGCGRC+ VCP   I A  Y+R     A LL +  V+A EIHT     + F  LW+++  + + +KLVAVS PD+GE T   M+T+ T+M  +                          +  N+WQ DGRPMSGDIG GAT   + FA  V +    P G    F QLAGGTN++T   L++ GL        +     S      +  S   L  +GG+AYGGYARK+VGRVL ++PE  G   +E+HP  LLEAL  A  LV
Sbjct:   31 CEKVCPADAISLKHSM---VDGERTLSDPLRGKYEGGVITERCYGCGRCLPVCPYDRIRAVSYVRDPTMTAELLKRDDVDATEIHTTGKGTDMFNTLWDNLSGSINNVKLVAVSLPDIGESTVDLMNTIYTIMEPH-------------------------FKGYNLWQLDGRPMSGDIGRGATRETVSFAAHVASMSERPPG----FYQLAGGTNSYTVDYLKKAGLF-------QSSNWNSGTATSEMASSHQAL--IGGIAYGGYARKIVGRVLRKIPEQFGRVHIEDHPDHLLEALQEAMSLV 296          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: M8C3I1_AEGTA (Uncharacterized protein n=4 Tax=Triticinae TaxID=1648030 RepID=M8C3I1_AEGTA)

HSP 1 Score: 181 bits (459), Expect = 1.210e-51
Identity = 121/310 (39.03%), Postives = 158/310 (50.97%), Query Frame = 1
Query:   13 CPADAVVFPDSPPPPLQRVDVVAKH-----LADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRG--LGGVAYGGYARKVVGRVLDQLPE--GSNCVEEHPKVLLEALAIARGLV 909
            CPADA+         L+RV V  +H     + DK  GGV+  RCYGCGRC+ VCP   I A  Y+R     A LL +  V+A+EIHT     + F  LW S+G + + +KLVAVS P+ G  T   M+ + T+M  N                          +  N+WQ DGRPMSGDIG GAT   + FA  + +    P G    F QLAGGTN +T   L++ GL   +              PG      +G +   +GG+AYGGYARK+VGRVL ++P   G  C+E+HP  LLEAL  A  LV
Sbjct:   26 CPADAIS--------LKRVMVGGEHAQSDPICDKLEGGVIMERCYGCGRCLSVCPYDRIRAMPYVRDPATTAELLKRSDVDAIEIHTTGKGIDMFNTLWNSLGESINNVKLVAVSLPNAGASTIDFMNAIYTIMQSN-------------------------LEGYNLWQLDGRPMSGDIGRGATRETVSFAVDLTSVPDRPLG----FYQLAGGTNLYTVDCLKKAGLFKAR------------TLPGTRTTEKVGSQEALIGGIAYGGYARKIVGRVLRKIPSELGRVCIEDHPGYLLEALQEALSLV 286          
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Match: A0A2P5CV86_PARAD (ABC transporter ABCE n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5CV86_PARAD)

HSP 1 Score: 184 bits (466), Expect = 3.280e-51
Identity = 125/308 (40.58%), Postives = 163/308 (52.92%), Query Frame = 1
Query:    1 CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCIDVCPPGIIEARKYMRPHDAVACLLGK--VEAVEIHTKKGNPERFQELWESIGAAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGRSCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPFGDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIIDSALGLRGL-GGVAYGGYARKVVGRVLD--QLPEGSNCVEEHPKVLLEALAIARGLV 909
            C+ VCPA+A+   D            + HL  K  GGVL  RCYGCGRC  VCP   I    Y+R   A A L+ +  V+A+EIHT       F+ELW+ +G +   L+LVAVS PD+GE T  +M+TM ++M  +                            LN+WQ DGRPMSGDIG GAT   I FA ++  SQ  P G    F+QLAGGTN +T   L++ GL   K    +     +S        S+  L+ L  GVAYGGYARK+VGR+L   Q  +G+  +EEHP+ LL+AL  A  LV
Sbjct:  147 CQKVCPANAISLEDRETMSQNLSHGASAHLGFK--GGVLTERCYGCGRCFPVCPYDKISVVTYIRDATATAELIIRDDVDALEIHTSGRQTSPFKELWDDLGDSIRYLRLVAVSLPDIGETTITSMNTMYSIMKPH-------------------------LHCLNLWQLDGRPMSGDIGRGATRESIAFALRLAASQERPNG----FLQLAGGTNAYTVDGLKKAGLFKTKSSFSD-----NSSDEKRKAGSSSSLQSLVAGVAYGGYARKIVGRILSTMQSQQGATHIEEHPEHLLQALKEAISLV 418          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7857.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLZ8_ECTSI2.310e-9152.634Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Ect... [more]
A0A835Z7A0_9STRA4.370e-5641.754Fe-4S ferredoxin iron-sulfur binding domain prote... [more]
A0A835US01_VANPL1.550e-5341.75Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
UPI0009E5040C2.020e-5340.39uncharacterized protein LOC110017905 isoform X1 n=... [more]
A0A2C9UCM7_MANES1.810e-5240.39Uncharacterized protein n=3 Tax=Crotonoideae TaxID... [more]
I1HLK2_BRADI4.470e-5238.85Uncharacterized protein n=2 Tax=Brachypodium dista... [more]
UPI001F5D09B94.570e-5239.17uncharacterized protein LOC124646688 n=2 Tax=Loliu... [more]
B8A1D4_MAIZE1.050e-5139.41Uncharacterized protein n=2 Tax=Andropogoneae TaxI... [more]
M8C3I1_AEGTA1.210e-5139.03Uncharacterized protein n=4 Tax=Triticinae TaxID=1... [more]
A0A2P5CV86_PARAD3.280e-5140.58ABC transporter ABCE n=2 Tax=Cannabaceae TaxID=348... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7857contigC-tenellus_contig7857:2..3420 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LLZ8
PFAMsFer4,Fer4_9,LdpA_C
Model size939
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue3.79e-92
EggNOG OGsCOG1142@1|root,2QU4W@2759|Eukaryota
DescriptionIron-Sulfur binding protein C terminal
Cds size939
COG categoryC
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7857.1.1prot_C-tenellus_contig7857.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7857 2..3420 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790064.9672716-CDS-C-tenellus_contig7857:1..1051680790064.9672716-CDS-C-tenellus_contig7857:1..105Choristocarpus tenellus KU2346CDSC-tenellus_contig7857 2..105 +
1680790064.9778628-CDS-C-tenellus_contig7857:514..6651680790064.9778628-CDS-C-tenellus_contig7857:514..665Choristocarpus tenellus KU2346CDSC-tenellus_contig7857 515..665 +
1680790064.9916673-CDS-C-tenellus_contig7857:916..11621680790064.9916673-CDS-C-tenellus_contig7857:916..1162Choristocarpus tenellus KU2346CDSC-tenellus_contig7857 917..1162 +
1680790065.0029752-CDS-C-tenellus_contig7857:1742..18301680790065.0029752-CDS-C-tenellus_contig7857:1742..1830Choristocarpus tenellus KU2346CDSC-tenellus_contig7857 1743..1830 +
1680790065.0149918-CDS-C-tenellus_contig7857:2030..21341680790065.0149918-CDS-C-tenellus_contig7857:2030..2134Choristocarpus tenellus KU2346CDSC-tenellus_contig7857 2031..2134 +
1680790065.028787-CDS-C-tenellus_contig7857:2639..26931680790065.028787-CDS-C-tenellus_contig7857:2639..2693Choristocarpus tenellus KU2346CDSC-tenellus_contig7857 2640..2693 +
1680790065.0437853-CDS-C-tenellus_contig7857:3228..34201680790065.0437853-CDS-C-tenellus_contig7857:3228..3420Choristocarpus tenellus KU2346CDSC-tenellus_contig7857 3229..3420 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7857.1.1

>prot_C-tenellus_contig7857.1.1 ID=prot_C-tenellus_contig7857.1.1|Name=mRNA_C-tenellus_contig7857.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=313bp
CESVCPADAVVFPDSPPPPLQRVDVVAKHLADKPSGGVLDIRCYGCGRCI
DVCPPGIIEARKYMRPHDAVACLLGKVEAVEIHTKKGNPERFQELWESIG
AAASRLKLVAVSFPDLGEDTNLAMSTMNTVMHGNGRDIWGLRGECGSSGR
SCGVKDEGGAQALNIWQTDGRPMSGDIGAGATSACIRFATKVLNSQAVPF
GDGQHFVQLAGGTNNHTAPKLRELGLLPGKGGGGEGGVGGSSLKPGLIID
SALGLRGLGGVAYGGYARKVVGRVLDQLPEGSNCVEEHPKVLLEALAIAR
GLVEGLETAAWG*
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mRNA from alignment at C-tenellus_contig7857:2..3420+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7857.1.1 ID=mRNA_C-tenellus_contig7857.1.1|Name=mRNA_C-tenellus_contig7857.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3419bp|location=Sequence derived from alignment at C-tenellus_contig7857:2..3420+ (Choristocarpus tenellus KU2346)
TGTGAAAGTGTGTGCCCAGCCGATGCTGTGGTTTTTCCAGACTCCCCTCC CCCCCCTTTGCAAAGGGTGGATGTTGTGGCAAAACATCTCGCAGACAAGC CTAGGTGAGGGTGTCCTGCAGGTGCTCCTGTGCACAAAACCATTTCCAAG CATAGACTGGAATATTGACTCCCCCCAATTCGGTTCTAATGAAGGGGCTG TGGACTTGATCATTCAGCCCAAGTGGGAAACAGTTTGAGCATTAGGGGTT GAACACCACATGTGTTGTGATAGGTGATTCAATGTGGGGCCTATCACAGC ACCACTCCAAGATATCAAAAAGATTATGTAAGATGTGAAGACCTTTTCCC ACTAGCCCCAATCTTCCAACTGCCAATTCCTCTAGAACCTTGCCTCCAAC CAATGCATAATATTGTACCTGGGATTAAACCATCTCCTGGTTTAGGCAAG CTCACAATCTGAACAAGCCTTGGCCCTTTCTCTCCCTTACCTATTATTTT GTTTGTCTGTCAGTGGTGGGGTCCTTGACATCCGCTGCTATGGGTGTGGT CGCTGCATTGATGTGTGCCCTCCAGGTATCATTGAGGCCCGAAAGTACAT GAGACCCCATGATGCTGTTGCTTGTCTCCTGGGTAAGGTTGAAGCTGTGG AGATTCACACTAAGGTGAGCAAGTGTCCTTTACACTCGAATGATAAGCAG GTTGGGGGGAGGAGGGGGTGCTGGTGAGCTGGATCTAACCAAGTATTTGT GTTGTCCATCTATTTGGGTAAGGCTGCGGCATACATACCATGTTAACTTT TCTCCTCCGGCCGGCCAACCATCCCCTACCTGAGAACACTCCCTTTATGT TCCACCTTCAAGTTTTCTTCTGTTTCATCCCCCAATCGTTGCACATCACA ATCCTTCTTAATGAGAAGGGCAACCCTGAGCGTTTCCAAGAGCTGTGGGA GTCCATTGGAGCAGCTGCCTCTAGGCTCAAGTTGGTTGCTGTTAGCTTCC CAGACCTTGGGGAGGACACGAATCTCGCAATGTCCACAATGAACACTGTA ATGCATGGGAATGGTAGGGACATTTGGGGGTTGAGAGGTGAATGTGGAAG TAGTGGTAGGAGCTGTGGAGTGAAGGACGAAGGAGGAGCACAAGCACTCA ACATTTGGCAGGTGCAGTATGGGTAATGGTGGTGGTGATCACTCAGAGCA CTGTGGTTCTTTGAAGCCTGGTCTAATATCAAGGGTTGAATGGTTGAGAG ATGTTAGTGATACTGCTGTTATGCTCAGCTCGTTTTTCCTTGTACCACAA GTCAAGTGCTGAAAGTAGTGCTTCATAGGGAGTATTATTGTCTTTGGATT TTGGTTCCATGCCACATCTTGCAAATCTAAGTTTTAGAGGGAGAGAGAGA ATAATTATGAGGAAGTGCCCCCTTGATTACCCAGTATTATGCATGGATAA ATTAGGATATCCAAAGGTTGTGATTGTGAAACAGATGTATGGAGACTTTA TCATGTTGACCTTGTGCAGTATGTTATGCTTTAAAGTGCTCAAGAAAGGC TCTCAATACCTGGTAATGACTGCTCCATTGCATCAATCCTAAAGCCCCAC ACCTTACAGAGTGTGAACTCACTGATTAAGCCCATTGTCCACCTGCCTAT TAAATGGGCTGGACTTACTCATTGCTCCCTCCATGTTCTCCAACTTTTTG TTCCTTGTGCATTTTTCCTCTCCCTCCATATCCTCACCTAGACGGATGGA CGACCAATGAGCGGAGATATTGGAGCAGGTGCAACATCTGCATGCATTCG CTTTGCAACAAAAGTTCTCAACTCTCAAGGTGCTGTTACTACAGCTCTGT TATGCATGTGTGTGTGGTCCTGCTTCTTCCCCAAAATAGTCAACAATCAT CTCCCAATCCCATCCCACTGTCCCCAACCCTGTCCATCCCTTATTGCCAC CTCCCTTTGAACCTTTACCACCTCAACCTACCCAATTTCCAACGCTGCTT GATGTCATGTCTACCCCTTCATCATGAAGCTGTACCCTTTGGAGACGGGC AGCATTTTGTGCAGCTAGCTGGAGGGACAAATAATCACACAGCACCCAAG CTGAGGGAGTTGGGATTGCTTCCGGGCAAAGGGGTGCGATGACATTGCTA GGGCCAGTACTTTTTTTTTTTCTTCCCTTTTTTTTCAAGCTCGTTGTTCT AAGAGTATGTGTTATGCTGTGGAAGGCGTATGTGGCAAGAAACTGGACTG GTATTGGTTGTGTGAGTATATGTCTTGGTTCCTTTGCTTCTCTTCATTTT CATTAACCTCTTTTCTCTTTACACCTAAAGTAATGTCTGGATGTATTGGA TGCTTGGTTTGCCCTGGCAACATTTTGATGTTTATTTGTGTGACTGAAAT TCCATGCATTGTGCTGTGGAAGGAGTAACTGACAAAAATGGACTGGACTG GTATAGGTAGTCTATGTGTATGCGTTTTGGTTCCTTTACTTTTCTTCATT TCCATTCGCCTCTATTTTTTTCTCTTTACATGTACAGAAATGACTAGATG CACTGCATGCACAGTTTGCTGAAGCAACATTTTGATGATTGTTGGTTATG TGGTTCATTGCCCACAGTGGGTTGCTTGAGAGAGAGAGGGAGGAGGAGAA GGGGGTGTAGGAGGGAGTTCCCTAAAACCTGGACTAATAATTGTTTGATT ACAACAAATTTTGCAATGTTATTCAATGGATTTTGTTCAACATATGTTAG CTCACTGCTGAATATCTAGTAATATTTGGGAGTTGAGACAATCATGCCCC AGTTCTACCTTTCTCAAAGAGGGTATCTTTCAGCTATTTGAGTTATGGCC TGTTGTCTGGGTAAAAATGTATTCTCCTGCCTTATTTAAACCCAAGGGAC AGCGAGGTTAACTGTTTAGCTTTCAAGGTATTCGTGGTAACATGCCTGTA TGTTGTTATTGCCCATCTTGAGGCAGGATGCAGAGAAGGGTCAATTAATT GACCTTTCTCACCTTGTATTGTTCCCAGGGTAAACATGCGCTCATGTACA AAAACGCAATTGACCATGTTGCTACCTGCAAATTGTTGGTCAAAGGGGAT GTGAACATGTTAAGTGCTTAGGTTGTACCATCAGTCCAATGATACCACTT CCCTTGATTTCGAATGATACCTCTCCTCCCTCTTCTCTTTGCCCACTCTA CACCCTCCTGTGCCAAAGTTTGACAAGGACTCTGCTTTGGGATTACGGGG CTTGGGGGGAGTAGCCTATGGTGGGTATGCCCGTAAAGTGGTTGGCAGAG TTTTAGATCAGCTTCCAGAAGGTTCAAATTGTGTGGAAGAACATCCAAAA GTACTGCTAGAGGCGCTTGCAATAGCCCGTGGACTGGTTGAGGGCCTTGA AACTGCTGCTTGGGGCTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig7857:2..3420+

>mRNA_C-tenellus_contig7857.1.1 ID=mRNA_C-tenellus_contig7857.1.1|Name=mRNA_C-tenellus_contig7857.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=939bp|location=Sequence derived from alignment at C-tenellus_contig7857:2..3420+ (Choristocarpus tenellus KU2346)
TGTGAAAGTGTGTGCCCAGCCGATGCTGTGGTTTTTCCAGACTCCCCTCC
CCCCCCTTTGCAAAGGGTGGATGTTGTGGCAAAACATCTCGCAGACAAGC
CTAGTGGTGGGGTCCTTGACATCCGCTGCTATGGGTGTGGTCGCTGCATT
GATGTGTGCCCTCCAGGTATCATTGAGGCCCGAAAGTACATGAGACCCCA
TGATGCTGTTGCTTGTCTCCTGGGTAAGGTTGAAGCTGTGGAGATTCACA
CTAAGAAGGGCAACCCTGAGCGTTTCCAAGAGCTGTGGGAGTCCATTGGA
GCAGCTGCCTCTAGGCTCAAGTTGGTTGCTGTTAGCTTCCCAGACCTTGG
GGAGGACACGAATCTCGCAATGTCCACAATGAACACTGTAATGCATGGGA
ATGGTAGGGACATTTGGGGGTTGAGAGGTGAATGTGGAAGTAGTGGTAGG
AGCTGTGGAGTGAAGGACGAAGGAGGAGCACAAGCACTCAACATTTGGCA
GACGGATGGACGACCAATGAGCGGAGATATTGGAGCAGGTGCAACATCTG
CATGCATTCGCTTTGCAACAAAAGTTCTCAACTCTCAAGCTGTACCCTTT
GGAGACGGGCAGCATTTTGTGCAGCTAGCTGGAGGGACAAATAATCACAC
AGCACCCAAGCTGAGGGAGTTGGGATTGCTTCCGGGCAAAGGGGGAGGAG
GAGAAGGGGGTGTAGGAGGGAGTTCCCTAAAACCTGGACTAATAATTGAC
TCTGCTTTGGGATTACGGGGCTTGGGGGGAGTAGCCTATGGTGGGTATGC
CCGTAAAGTGGTTGGCAGAGTTTTAGATCAGCTTCCAGAAGGTTCAAATT
GTGTGGAAGAACATCCAAAAGTACTGCTAGAGGCGCTTGCAATAGCCCGT
GGACTGGTTGAGGGCCTTGAAACTGCTGCTTGGGGCTGA
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