mRNA_C-tenellus_contig781.9.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: A0A6H5KG47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG47_9PHAE) HSP 1 Score: 276 bits (705), Expect = 7.390e-80 Identity = 152/268 (56.72%), Postives = 187/268 (69.78%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREFTGTSTSAQHALAKHVLAEIPGQFLSYMETKKIPPNARGAKMGGADVPAGFAQGGAPLSVPLPPQXXXXXXVHQPPNAYPGYFDAGSSGGSAPPETHSQADDDLPPPY 804 DTDK FPV GFGGKLGP P NH FAVN + APEV M GV+Q YY SLRRVQLSGPT+FQ++INQAA +A ++++ + G+KY VLCI+TDGIINDMDAT+ IV+A+ PLSIVIVGVG +FT+M+HLDGDRQRL SP +G A+RDMVQFVPFR+F G ++AQHALAKHVLAEIPGQF+SYM++ I P + + G+ V G G A + P+PPQ GY G+ GG+A +DLPP Y Sbjct: 387 DTDKKFPVIGFGGKLGPDLPANHAFAVNFQEDAPEVEGMAGVLQAYYQSLRRVQLSGPTLFQAIINQAAQIANSTKHRNSVGQKYHVLCIMTDGIINDMDATVSAIVDAADAPLSIVIVGVGQGDFTAMDHLDGDRQRLTSPFTGKVASRDMVQFVPFRDFNGFGSAAQHALAKHVLAEIPGQFISYMQSNGIDPANK--RPPGSIVTGGGGVGPA-MVPPMPPQAA-------------GY---GAGGGAA---------NDLPPAY 626
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: A0A7S4DAY2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAY2_HETAK) HSP 1 Score: 206 bits (525), Expect = 5.490e-57 Identity = 109/204 (53.43%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPE---VALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREF-TGTSTSAQHALAKHVLAEIPGQFLSYMETKKIPPNARGA 600 D+DKLFPVYGFG KL PGQP NHCFA N D+AP+ + GV+Q YY ++ RV +SGPT+FQ +I+QAA +AR++ + KY+VL I+TDGIINDM TI +V AS LPLS+++VGVGDA+F +M LD D++RL S + + AARD+VQFV ++ T + + +H LAK +LAEIPGQFL YM++K + P GA Sbjct: 139 DSDKLFPVYGFGAKLAPGQPANHCFAANFDDRAPDHHPAPGIAGVLQTYYAAVARVVMSGPTLFQQIISQAAALARSTASQG----KYYVLLILTDGIINDMQKTIDTLVAASELPLSVLMVGVGDADFENMHILDADQERLKSTGAKL-AARDIVQFVEISKYQTNSRLADKHQLAKELLAEIPGQFLDYMKSKNMSPQQLGA 337
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: A0A835ZIA4_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIA4_9STRA) HSP 1 Score: 205 bits (522), Expect = 3.210e-54 Identity = 114/210 (54.29%), Postives = 141/210 (67.14%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREFTGTSTSAQHALAKHV------------LAEIPGQFLSYMETKKIPPNAR 594 D DK FPV GFGGK QPV HCFAVNG++ PE + G++Q+YYDSLR V+L GPT+F +I QAA VA + + DD KY VL I+TDG I DM T+ IV AS LPLSI+IVGVG+A+F SME LDGD LVS SSGVRA RD+VQFVP R+ ++ +HA+AK V LAEIP Q ++YM+++ IPP R Sbjct: 324 DADKAFPVMGFGGKPHHSQPVQHCFAVNGNEAQPEAMGVQGILQMYYDSLRTVELFGPTLFAPIIGQAAGVASSLQTDDPSHHKYSVLLILTDGQICDMQNTVDAIVGASHLPLSIIIVGVGNADFKSMEVLDGDDAALVS-SSGVRAQRDIVQFVPMRQ---VASRGEHAIAKEVSQKDQSLTRMCVLAEIPDQVVAYMKSQNIPPGPR 529
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: A0A6H5LMQ8_9PHAE (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LMQ8_9PHAE) HSP 1 Score: 202 bits (514), Expect = 1.550e-52 Identity = 130/292 (44.52%), Postives = 169/292 (57.88%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREFTGTSTSAQHALAKHVLAEIPGQFLSYMETKKIPPN---------ARGAKMGGADVPAGFAQGGAPLSVPLPPQXXXXXXVHQPPNAYPGY------FDAGSSGG---------SAPPETHSQADDDLPPPY 804 D D+ FPV+GFGG P +HCFAVNG++ PEV + GV+ +Y SL RVQLSGPT+F VI+QAA +A ++ + D + Y +L +ITDG+I DM+ T+ IV A+ P S+VIVGVGDA++TSME LDGD RLV+ +G RA RD+VQFVP R+F G S+ HALAK VLAEIP Q + YM+ IPP +G+ MG + F GA VP PQ HQ P+A P + ++ G +AP E Q D PP Y Sbjct: 371 DDDRRFPVFGFGGCPVYRAPASHCFAVNGNENDPEVEGIAGVLDLYRQSLTRVQLSGPTLFAPVISQAASLAASTMSKDPSQQYYTILLLITDGVICDMENTVEAIVAAADYPFSMVIVGVGDADYTSMEQLDGDDVRLVN-RAGQRAGRDIVQFVPMRDFAGKSS---HALAKEVLAEIPAQVIEYMKNNHIPPGNPHRPSLAGCQGS-MGSMALKESFMHNGA-APVPGMPQGGSFTN-HQAPSAAPSFRGQPQQYNQSQQGSFMHPQAGAPTAPYEPPQQTGGDAPPVY 655
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: A0A7S2UZU9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZU9_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.130e-52 Identity = 104/203 (51.23%), Postives = 137/203 (67.49%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDG---VIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVR----AARDMVQFVPFREFTGTSTSAQHA-LAKHVLAEIPGQFLSYMETKKIPP 585 D+DKLFP YGFGG+ GQP HCFA+N ++QAP+V + G V+Q Y+ SL+ VQL GPT+F VI +A ++A+ + + +KY+VL IITDG+ NDM TI IV+AS+LPLSI+IVGVG A+F++M LD D RL +P GV A+RD+VQFV F T A A LA+ +LAEIP QFL YM++ PP Sbjct: 4 DSDKLFPAYGFGGRPAQGQPTAHCFAINRNEQAPQVHPVQGISGVLQSYFSSLQWVQLHGPTLFHPVIQRAHVLAQQAAMEG--SQKYYVLLIITDGMNNDMQQTIDAIVKASALPLSILIVGVGQADFSNMHVLDADNGRLSTPGDGVNGPMTASRDIVQFVEIAPFLSKGTGAYEAPLARELLAEIPAQFLGYMKSIGKPP 204
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: UPI0015ADC75B (copine-8-like isoform X4 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015ADC75B) HSP 1 Score: 193 bits (490), Expect = 6.560e-51 Identity = 108/198 (54.55%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREF---TGTSTSAQHALAKHVLAEIPGQFLSYMETKKIPP 585 DTDK+FP GFG KL P V+H FA+NG+ Q P A +DGV++ YY SL+ VQL GPT F VIN A A + E+ G +YF+L IITDG+I+DM T IV A+ LP+SI+IVGVG AEF +M LDGD R+ S G RA RD+VQFVPFR++ TG S + LAK VLAEIP QFLSYM T+ P Sbjct: 241 DTDKMFPALGFGAKLPPDGRVSHEFALNGNPQNPYCAGIDGVMEAYYQSLKSVQLYGPTNFSPVINHVARYAASVED----GTQYFILLIITDGVISDMAQTKEAIVNAACLPMSIIIVGVGPAEFDAMVELDGDEVRITS--RGRRAERDIVQFVPFRDYVDRTGNSVLSMARLAKDVLAEIPDQFLSYMRTRGFKP 432
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: UPI001C350BCD ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C350BCD) HSP 1 Score: 188 bits (478), Expect = 8.930e-51 Identity = 107/199 (53.77%), Postives = 132/199 (66.33%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREF---TGTSTSAQHALAKHVLAEIPGQFLSYMETKKIPPN 588 D+DK+FP GFG KL P V+H FA+NG+ Q P A +DGV++ YY SL+ VQL GPT F VIN A A + ++ G +YFVL IITDG+I+DM T IV AS LP+SI+IVGVG AEF +M LDGD R+ S G A RD+VQFVPFR++ TG + LAK VLAEIP QFLSYM T+ I P+ Sbjct: 98 DSDKMFPALGFGAKLPPDGRVSHEFALNGNPQNPYCAGIDGVMEAYYQSLKSVQLYGPTNFSPVINHVARYAASVKD----GSQYFVLLIITDGVISDMAQTKESIVNASCLPMSIIIVGVGPAEFDAMVELDGDEVRI--SSRGRYAERDIVQFVPFRDYIDRTGNHILSMARLAKDVLAEIPDQFLSYMRTRGIKPS 290
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: G3UD31_LOXAF (Copine domain-containing protein n=2 Tax=Eutheria TaxID=9347 RepID=G3UD31_LOXAF) HSP 1 Score: 186 bits (472), Expect = 9.930e-51 Identity = 104/198 (52.53%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREF---TGTSTSAQHALAKHVLAEIPGQFLSYMETKKIPP 585 D+DKLFP YGFG KL P ++H F +N +D+ P A ++GV++ Y+ SLR VQL GPT F VINQ A A + G +Y+VL IITDG+I+DM T IV ASSLP+SI+IVGVG A F +ME LDGD R+ S G A RD+VQFVPFR++ +G + LAK VLAEIP Q LSYM T+ I P Sbjct: 35 DSDKLFPAYGFGAKLPPEGRISHQFPLNNNDEDPNCAGIEGVLESYFQSLRTVQLYGPTYFAPVINQVARAAAKISD----GSQYYVLLIITDGVISDMTQTKEAIVSASSLPMSIIIVGVGPAMFEAMEELDGDDVRV--SSRGRYAERDIVQFVPFRDYVDRSGNQVLSMARLAKDVLAEIPEQLLSYMRTRDIQP 226
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: A0A8J0T353_XENTR (copine-9 isoform X1 n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A8J0T353_XENTR) HSP 1 Score: 189 bits (481), Expect = 1.050e-50 Identity = 106/198 (53.54%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREF---TGTSTSAQHALAKHVLAEIPGQFLSYMETKKIPP 585 D+DKLFP YGFG K+ P ++H FA+NG + P + GV++ Y+ SLR VQL GPT F SVINQ A A D G +Y+VL IITDG+I+DM T IV ASSLP+SI+IVGVG AEF +ME LDGD R+ S G A RD+VQFVPFR++ +G + LAK VLAEIP QFLSYM+++ I P Sbjct: 142 DSDKLFPAYGFGAKIPPDGKISHEFALNGDIENPNCVGIQGVLEAYFKSLRTVQLYGPTNFASVINQVARAA----GDVTDGSQYYVLLIITDGVISDMVQTKEAIVNASSLPMSIIIVGVGPAEFDAMEELDGDEVRV--SSRGRFAERDIVQFVPFRDYVDRSGNQVLSMARLAKDVLAEIPEQFLSYMKSRDIKP 333
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Match: UPI001ABDA239 (copine-9-like n=1 Tax=Bufo bufo TaxID=8384 RepID=UPI001ABDA239) HSP 1 Score: 184 bits (466), Expect = 4.940e-50 Identity = 102/198 (51.52%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 1 DTDKLFPVYGFGGKLGPGQPVNHCFAVNGHDQAPEVALMDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLCIITDGIINDMDATIHGIVEASSLPLSIVIVGVGDAEFTSMEHLDGDRQRLVSPSSGVRAARDMVQFVPFREF---TGTSTSAQHALAKHVLAEIPGQFLSYMETKKIPP 585 D+DK FP YGFG K+ P ++H F +NG + P + GV++ Y+ SLR VQL GPT F VINQ A A + G +Y+VL IITDG+I+DM T +V ASSLPLSI+IVGVG AEF +ME LDGD R+ S G A RD+VQFVPFR++ +G + LAK VLAEIP QFLSYM++++I P Sbjct: 24 DSDKFFPAYGFGAKIPPDGKISHEFPLNGDLENPNCVGIQGVLEAYFKSLRTVQLYGPTNFAPVINQVASAAGQVTD----GSQYYVLLIITDGVISDMAQTKEAVVNASSLPLSIIIVGVGPAEFDAMEELDGDEVRV--SSRGRLAERDIVQFVPFRDYVDRSGNQILSMARLAKDVLAEIPEQFLSYMKSREIKP 215 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig781.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig781.9.2 >prot_C-tenellus_contig781.9.2 ID=prot_C-tenellus_contig781.9.2|Name=mRNA_C-tenellus_contig781.9.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=233bp MDGVIQVYYDSLRRVQLSGPTIFQSVINQAAIVARNSENDDLPGKKYFVLback to top mRNA from alignment at C-tenellus_contig781:12147..16588- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig781.9.2 ID=mRNA_C-tenellus_contig781.9.2|Name=mRNA_C-tenellus_contig781.9.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4442bp|location=Sequence derived from alignment at C-tenellus_contig781:12147..16588- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig781:12147..16588- >mRNA_C-tenellus_contig781.9.2 ID=mRNA_C-tenellus_contig781.9.2|Name=mRNA_C-tenellus_contig781.9.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=699bp|location=Sequence derived from alignment at C-tenellus_contig781:12147..16588- (Choristocarpus tenellus KU2346)back to top |