mRNA_C-tenellus_contig7662.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE) HSP 1 Score: 120 bits (302), Expect = 7.790e-30 Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQVGLQEADPRLSPLGASALLEEWFVATA----GEGSWESDKDVLCWI 279 QVAVQFADLHDTPGRM A+G +R+ VPW+ESR +F+WRLRRRLAEFDLR QV ADP + PL AS LL++W+++ A WE DK VL W+ Sbjct: 2125 QVAVQFADLHDTPGRMEARGAVRKVVPWTESRSFFFWRLRRRLAEFDLRRQVS--RADPSVDPLAASGLLKDWYLSDAEVNGARPCWEEDKAVLAWM 2219
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: W7T6R6_9STRA (Acetyl-carboxylase alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6R6_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.040e-28 Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQVGLQEADPR-------LSPLGASALLEEWFVATAGEGS--WESDKDVLCWI 279 QVAVQFADLHDTPGRM A GVIR+ VPW ++R +FYWRLRRRLAEF LR +V L+ D + ++ L ASALL+ WFVAT G+ + WE D++VL W+ Sbjct: 120 QVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEV-LKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWM 220
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A7S1H3I2_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H3I2_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.170e-27 Identity = 57/101 (56.44%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLR------AQVGLQEADPRLSPLGASALLEEWFVATAG--EGSWESDKDVLCWI 279 Q+AVQF +LHDTPGRM A GV+ R V WSESR YFYWRLRR+LAEFDLR A+VG P + L ASAL++EWF+ T G + W DK +L W+ Sbjct: 62 QIAVQFCELHDTPGRMKAVGVVERVVEWSESRAYFYWRLRRKLAEFDLRKKIVEAAEVGRGVKAPTV--LEASALIKEWFIETPGMTDDQWSDDKVILAWM 160
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A4D9CUA8_9STRA (CoA carboxyltransferase C-terminal domain-containing protein (Fragment) n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUA8_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.630e-27 Identity = 60/102 (58.82%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQVGLQEADPR-------LSPLGASALLEEWFVATAGEG--SWESDKDVLCWI 279 QVAVQFADLHDTPGRM A GVIR+ VPW ++R +FYWRLRRRLAEF LR +V L+ D + ++ L ASALL+ WFVAT G+ WE D++VL W+ Sbjct: 292 QVAVQFADLHDTPGRMEAVGVIRKAVPWGQARSFFYWRLRRRLAEFHLRKEV-LKAGDGKEGGKEGGMTLLQASALLKSWFVATPGKSIEGWEEDREVLGWM 392
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A0B4L7U5_9STRA (Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7U5_9STRA) HSP 1 Score: 110 bits (274), Expect = 4.700e-26 Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQV-----GLQEADPRLSPLGASALLEEWFVATAGEGS--WESDKDVLCWI 279 QVAVQFADLHDTPGRM A GVIR+ VPW+++R +FYWRLRRRLAEF LR +V G + +S L AS LL+ W+V+T G+ + WE D++VL W+ Sbjct: 2203 QVAVQFADLHDTPGRMAAVGVIRQVVPWAQARSFFYWRLRRRLAEFHLRKEVFKAAGGKGGREGGMSLLQASVLLKSWYVSTPGKTAEGWEEDREVLGWM 2302
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A7S2A3W1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A3W1_TRICV) HSP 1 Score: 108 bits (270), Expect = 1.550e-25 Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQV----GLQEADPRLSPLGASALLEEWFVATAG--EGSWESDKDVLCWI 279 Q++VQF +LHDTPGRM A GVI REV W +R +F+WRLRR+LAEFDLR ++ + A +LSPL ASAL++ WFV T G E W+ DK +L W+ Sbjct: 535 QISVQFCELHDTPGRMRATGVIEREVEWKNARTFFFWRLRRKLAEFDLRKKMIEAGEIGRATKKLSPLEASALMKSWFVETPGMTEALWDDDKAMLQWM 633
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A7S2A4C3_TRICV (Acetyl-CoA carboxylase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4C3_TRICV) HSP 1 Score: 108 bits (270), Expect = 1.630e-25 Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQV----GLQEADPRLSPLGASALLEEWFVATAG--EGSWESDKDVLCWI 279 Q++VQF +LHDTPGRM A GVI REV W +R +F+WRLRR+LAEFDLR ++ + A +LSPL ASAL++ WFV T G E W+ DK +L W+ Sbjct: 1948 QISVQFCELHDTPGRMRATGVIEREVEWKNARTFFFWRLRRKLAEFDLRKKMIEAGEIGRATKKLSPLEASALMKSWFVETPGMTEALWDDDKAMLQWM 2046
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A835YMY6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY6_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.230e-25 Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQVGLQEADPRLSPLG----ASALLEEWF---VATAGEGSWESDKDVLCWI 279 Q+AVQFADLHDTPGRM A G +R+ VPW+E+R +FYWRLRRRLAEFDL Q LQ+A SP A ALL+ WF V + G+ WE DK VL W+ Sbjct: 2127 QLAVQFADLHDTPGRMAATGAVRKVVPWAEARSFFYWRLRRRLAEFDLCRQ--LQQASKGKSPAEGIDQARALLKGWFASMVNSTGQQQWEDDKTVLAWM 2224
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A7S2I8N6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8N6_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.060e-25 Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQVGLQEADP------RLSPLGASALLEEWFVATAG--EGSWESDKDVLCWI 279 Q+AVQF +LHDTPGRM A GVI + V W +R +F+WRLRR+LAEFD R ++ QEA L+ +GASA+++EWF+ T G E W+ DK VL W+ Sbjct: 179 QIAVQFCELHDTPGRMKAVGVIEKSVEWKNARTFFFWRLRRKLAEFDFRKKI--QEASTIGRGIQTLTAIGASAMMKEWFIGTPGMSESMWDDDKAVLSWM 277
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Match: A0A7S2MZF0_9STRA (Acetyl-CoA carboxylase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MZF0_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.960e-24 Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 1 QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAQVGLQEADP------RLSPLGASALLEEWFVATAG--EGSWESDKDVLCWI 279 Q+AVQF +LHDTPGRM A GVI + V W +R +F+WRLRR+LAEFD R ++ QEA L+ +GASA+++EWF+ T G E W+ DK VL W+ Sbjct: 2203 QIAVQFCELHDTPGRMKAVGVIEKSVEWKNARTFFFWRLRRKLAEFDFRKKI--QEASTIGRGIQTLTAIGASAMMKEWFIGTPGMSESMWDDDKAVLSWM 2301 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7662.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7662.1.1 >prot_C-tenellus_contig7662.1.1 ID=prot_C-tenellus_contig7662.1.1|Name=mRNA_C-tenellus_contig7662.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=93bp QVAVQFADLHDTPGRMVAKGVIRREVPWSESRVYFYWRLRRRLAEFDLRAback to top mRNA from alignment at C-tenellus_contig7662:41..1142+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7662.1.1 ID=mRNA_C-tenellus_contig7662.1.1|Name=mRNA_C-tenellus_contig7662.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1102bp|location=Sequence derived from alignment at C-tenellus_contig7662:41..1142+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7662:41..1142+ >mRNA_C-tenellus_contig7662.1.1 ID=mRNA_C-tenellus_contig7662.1.1|Name=mRNA_C-tenellus_contig7662.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=279bp|location=Sequence derived from alignment at C-tenellus_contig7662:41..1142+ (Choristocarpus tenellus KU2346)back to top |