mRNA_C-tenellus_contig7648.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A6H5L0U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U6_9PHAE) HSP 1 Score: 349 bits (895), Expect = 2.830e-113 Identity = 174/296 (58.78%), Postives = 216/296 (72.97%), Query Frame = 1 Query: 607 MFG--PTQARRVISNDPAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDL---EAPLKAIRLWNKWNTGLYEWAKQKQVHG-TGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVR 1476 MFG + R + + P +IR PVPL+VGG+DGSGTRGVVALLQ+L VPMV+ED GT+DVHGAPYM K GWP +V P++ W+ G+ YE+ A LR T A+ L +M+K K ++ + A YVSWG KAPVSM+LVPFF EAWG KFLHVVRDGRD+AFSGNQTPVEKF+ F ++ E +KA+ LWN WN G++ WA ++ G TGLDYLLLH EDL+DPE FAA+KDVAEFVGSPLSD DLCCIA E ++DMGSH+K++++R +TSRFGKWK R Sbjct: 1 MFGGLTSPLRPWLESQPGLIREPVPLIVGGSDGSGTRGVVALLQQLKVPMVVEDRGTMDVHGAPYMDKGGWPAVVSPVIGWAKGTGYESRSAPAQLRRKTFDALGGLKAQMQKMTGKSRSIGGEAAKYVSWGFKAPVSMVLVPFFEEAWGKA--KFLHVVRDGRDIAFSGNQTPVEKFYADMFPEGTRESGFKEPSVKAMALWNSWNVGVHHWAASRKERGATGLDYLLLHAEDLIDPEAKFAAIKDVAEFVGSPLSDFDLCCIATEGSKDMGSHTKSQKDRGK-ITSRFGKWKAR 293
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: D8LQ47_ECTSI (APPLE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ47_ECTSI) HSP 1 Score: 346 bits (888), Expect = 5.240e-110 Identity = 171/285 (60.00%), Postives = 211/285 (74.04%), Query Frame = 1 Query: 628 RRVISNDPAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDL---EAPLKAIRLWNKWNTGLYEWAKQKQVHG-TGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWK 1470 R + + P +IR PVPL+VGG+DGSGTRGVVALLQRL VPMV+ED GT+DVHGAPYM K GWP +V+P++ W+ G+ YE+ A LR T A+ L +M+K A K + A +VSWG KAPVSM+LVPFF EAWG KFLHVVRDGRD+AFSGNQTPVEKF+ F ++ E +KA+ LWN WN G++ WA ++ G TGLDYLLLH EDL+DPE FAA+KDVAEFVGSPLSD DLCCIA E ++DMGSH+K++++R +TSRFGKWK Sbjct: 10 RPSLGSQPGLIREPVPLIVGGSDGSGTRGVVALLQRLKVPMVVEDRGTMDVHGAPYMVKGGWPAVVRPVIGWAKGAGYESRGAPAQLRRKTFDALGGLKVQMQKMAGKSRPTGGEAAKHVSWGFKAPVSMVLVPFFEEAWGKA--KFLHVVRDGRDIAFSGNQTPVEKFYADMFPEGTRESGFKEPSVKAMALWNSWNVGVHHWAASRKERGATGLDYLLLHAEDLIDPEAKFAAIKDVAEFVGSPLSDFDLCCIATEGSKDMGSHTKSQKDRGK-ITSRFGKWK 291
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A482SCK3_9ARCH (APPLE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCK3_9ARCH) HSP 1 Score: 191 bits (486), Expect = 5.380e-50 Identity = 114/301 (37.87%), Postives = 174/301 (57.81%), Query Frame = 1 Query: 676 LVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKT---------------ASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDL-EAPLKAIRLWNKWNTGLYEW--AKQKQVHGT-------GLDYLLLHTEDLLDPEHN--FAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVRGRLEVGV 1497 L+VGGTDGSGTR VV +L LGV MV ED T D+H GWP +V+P+L+ +H NY+ D + T+ AV K+ + AQK T P+ + AS + +G KAPV+M L+P++T KFLHV+RDGRD+AFS NQ PVEKF++ ++ D+ + ++AI+LW+ WN G+ +W A + + T G Y++LH+ED++ P+ + A+ +A +VGS +S +CC+A++ + MGSH ++ + AV V+ R+GKW+ R G+ Sbjct: 127 LIVGGTDGSGTRRVVQVLTDLGVTMVSEDPETYDIHAD---LVSGWPPVVKPVLKHTHTLNYKPEDLPKHVNQQTIAAVR----KITEQAQKDSTKPQSSRLAVGGALNIKTHAHASAIQYGFKAPVAMTLLPYWTSVLPR--VKFLHVLRDGRDIAFSANQGPVEKFYEDMYAKHAADVKDKRVQAIQLWSDWNVGILQWSLAYVQSLSNTNTSSSDKGYGYMMLHSEDIVSPDMQVRYEAMAKLAMYVGSDMSADRICCMAVKDSTFMGSHDRS--QHAV-VSKRYGKWEGYTRNNKGL 415
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A1Z5JYM4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYM4_FISSO) HSP 1 Score: 189 bits (479), Expect = 5.760e-50 Identity = 112/303 (36.96%), Postives = 165/303 (54.46%), Query Frame = 1 Query: 661 RHPVPL-VVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMK------------KSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDL----EA---------PLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVRGRLEV 1491 R +PL ++GG+DGSGTR V +L L VPM+++D TLD+H + +GWP LV ++ +H + YE SD S +++ D L +M+ + + H ++ + +G KAPVSM+L+P E + E KFLHV+RDGRD+A S N +PV+KF+ T + N + + EA + A++LWN WNT +YE+ +DYL + TEDLL+P F A++ VAEFVGSPLS LCC++ ++ DMG K G G+ VR +LE Sbjct: 6 RSKLPLLIIGGSDGSGTRAFVDVLGHLHVPMLVDDKATLDIHAPCFYHGDGWPHLVNRVMNETHSARYEFSDLSPSVQ-------DELHEQMRICFREHYAPRALRLLMEAHKKGKELPHRIRYGFKAPVSMLLLPVLLETF--ENIKFLHVIRDGRDIALSSNTSPVDKFYRTFYPNAAEQVTMLHEALGNDTVSVKQVMAMQLWNDWNTQVYEFGTSHP----SIDYLPIKTEDLLNPVTRFEAIQQVAEFVGSPLSTAQLCCLSQKELHDMG-----KSMNFQGKQENSGRPDVRTQLEA 290
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7S2TNP4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TNP4_9EUKA) HSP 1 Score: 161 bits (407), Expect = 4.040e-39 Identity = 113/322 (35.09%), Postives = 160/322 (49.69%), Query Frame = 1 Query: 517 ASPTGRSTPGSLALTKEEGDNVPFGLPGEPMFGPTQARRVISNDPAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKD----LEAPLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWK 1470 AS + PGS + ++P G + G P I P++VGGTDGSGTR VV LL L V MV +D T DVH GWP +V+ L +SHG+NY+ D R+ ++ R KMKK A++ + + WG KAP++ +L+PF E + GF F+ V+RDGRDL FS NQ+PV+KF+ T + KD L+ KAIR+W+ NT + + QV G YL + E+ ++ E E + +D+CC + R SH K K + GV SR+GKW+ Sbjct: 182 ASTDMKKDPGSTLFRRVSMADLPDGTTSAELVGEENVL-----PPKDISEEPPIIVGGTDGSGTRAVVTLLSNLNVLMVKDDACTFDVHAGEM---GGWPPVVRRALRFSHGANYKPEDIPENDRAYLRRSLKRFADKMKKEAKRFSRMKR----HERWGFKAPIAQMLLPFLDEVF--PGFSFVQVLRDGRDLPFSKNQSPVDKFYVTMYKG-AKDSYLNLDPKFKAIRMWSDANTQVQTYMNTVQVP-KGSIYLRMKIENSVEEESLLQMGYVCNEKLKLGYKREDMCC----RLRGYISHLK-KADFFRGVKSRYGKWE 482
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7R9U6Q8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Q8_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.650e-36 Identity = 100/303 (33.00%), Postives = 147/303 (48.51%), Query Frame = 1 Query: 676 LVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSH---GSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGN--EGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTF-SNQGKDLEAPLKAIRLWNKWNTGLYEWAKQK------------------------------QVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVR 1476 L+V GTDGSGTR +V LL LGV M+ E+ T DV A GW ++VQP+L + G++Y D +R+ + V+ +A K SWG KAP+SM+ +P F A +G + LHV+RDGRDL+FSGNQ+PV+K + + K A A++LW++ N G + +A++ + L YLL+ ED + + A V+ VA FVG+P + +C + D+GSH K R G+ +RFGKWK + Sbjct: 141 LIVCGTDGSGTRSIVNLLAHLGVRMIDENRSTRDVE-AWKGDLGGWDKIVQPLLPHTAAGGGADYNVEDLPEDVRTQVVQWVNEFLDLYTPAAL------SKGGVKASWGFKAPISMLTIPVFAHALAQRGQGLRVLHVLRDGRDLSFSGNQSPVQKLWHPLHPTTSAKQFGAEAAALQLWDENNVGAWSFARRNAAKPGPVEVALSATEAIQVPPELAAASRMPSLKEAFLGYLLVRIEDFVFKDRKAALVQRVAAFVGAPTDKESVCRVVRLPATDLGSHGKV--NRRAGLAARFGKWKEK 434
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7R9WRJ1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRJ1_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.210e-34 Identity = 99/268 (36.94%), Postives = 140/268 (52.24%), Query Frame = 1 Query: 670 VPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDLEAPLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVT---SRFGK 1464 VPLV+ GTDGSGTRGV A+LQ+LGVP+V++D LDVH A GW LV+ L SH D L L + + ++ A H T VS+ KAP++M L+P + FK +HVVRDGRD+AFS NQ+PV K+++ G D KA+RLWN WN + W + +YL++ +EDL+ P A ++ +A FV +P + C +L + GS+ K K+ G+ +R GK Sbjct: 61 VPLVMVGTDGSGTRGVAAILQQLGVPLVVDDFVQLDVHAASI---GGWTPLVRSAL--SH------KDIDAVLSQYLLRELPPRWD--QQYATHEHAAMSPT---VSFAFKAPIAMTLIPQLRRIFDGR-FKLVHVVRDGRDIAFSDNQSPVNKYYEVVHGKDGSDTHC--KAMRLWNDWNVQAHRWMRDDP------NYLVVRSEDLMSPRRG-AVLQRLARFVDAP----GVPC-SLREVPQRGSYGKWKQLADAGMLQELNRIGK 297
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7S1GKE0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKE0_CYCTE) HSP 1 Score: 129 bits (324), Expect = 8.030e-31 Identity = 73/209 (34.93%), Postives = 115/209 (55.02%), Query Frame = 1 Query: 820 LVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQ--------KVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTF------SNQGKDLEAPLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDM 1404 L + +L+ +H ++Y+ D S L+ F K+KK ++ A +V +G KAP++M+LVP E G K+LH+VRDGRD+AFS NQ+PV+K + T + S + + ++ + LWN WNT L +W K+ G D+L++ TEDLLDP F ++ +A FVGS +S +++CC++ T DM Sbjct: 2 LAKAVLQETHSASYKFGDLSHFLQD----GAKEEFQKLKKRIDFQKGAAYGRLRHNDVTPARWVEYGFKAPITMVLVPILREVLGP--MKYLHIVRDGRDVAFSTNQSPVKKLYHTMYQDARLRSYKYSGNLSWVRGVHLWNDWNTQLLQWEKENA--GDRFDFLVVRTEDLLDPAKRFDSLLQLAHFVGSSISTEEICCLSQSATVDM 202
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7S1FP45_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP45_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.150e-30 Identity = 103/401 (25.69%), Postives = 171/401 (42.64%), Query Frame = 1 Query: 649 PAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKE---------GWPELVQPILEWSHGS-NYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHT----------------------------------------------------------------------------------LPEKTASYVSWGLKAPVSMILVPFFTEAW-----GN---------EGFKFLHVVRDGRDLAFSGNQTPVEKFFDTT---FSNQGKDLE---APLKAIRLWNKWNTGLYEWAKQKQVHG----------TGLDYLLLHTEDLL--DPEHNFAAVKDVAEFVGSPLSDKDLCCIAL-EKTRDMGSHSKTKEERAVGVTSRFGKWKVR 1476 P I++ P+PL+VGG+DGSGTR +V++L L P + + T DV G GWP +V+ +++ G NY S+ T+L+ V+R+ T +++ + + T +P+ + +S+G+KAP SM+++P + + GN +GFKF+HV+RDGRD+AFS NQ+PV KFFD +N D E + A++LWN +N + W K+++ + DY + ED + D F K +A +GSPL+D ++CC+A E+ +G+ ++T ++ V +GKWK + Sbjct: 98 PKILKSPIPLIVGGSDGSGTRSIVSILIDLCAPFLFQTESTFDVEGTEMTFNRSIESRILDVGWPGIVREGIKYGRGVVNYSLDHGSL---KTSLVGVERMITAHERAVEVIETCMNETSKNFRCRRIPDPRIVGINKRQNIRRSSPDRRRRSAFRNQEHSRRLLSRKSFRERQHNXXXXXNSRAKIPRGLRYNFAIPKNRSMDISYGIKAPASMLMLPLLDQIYSSSGSGNGASDSNRNEKGFKFIHVLRDGRDVAFSKNQSPVNKFFDLVNPEANNMRLDAEEVPCEICAMQLWNDFNVQAHNWLKERKKRDKERDSTDPVKSRFDYATVRVEDTMSDDISVRFNTFKSLATLIGSPLTDDEICCVAKKERNIKIGNTAETIQKHEV-----YGKWKKK 490
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A1E7EYM7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYM7_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.100e-28 Identity = 112/383 (29.24%), Postives = 161/383 (42.04%), Query Frame = 1 Query: 667 PVPLVVGGTDGSGTRGVVALLQR-LGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGS---NYETSDASMTLRSTTL----------------------------MAVDRLFT---KMKKS------------AQKVHTLPEKT---------------------------------------------------ASYVSWGLKAPVSMILVPFFTEA-----------------------WGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDLEA---------PLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVK-DV----AEFVGSPLSDKDLCCIALEKTRDMGS 1410 P+ L+VGG+DGSGTRG+V +L+ L V +IED TLDVHG K GWPELV +L ++G + T++ + +L S MAV + F M KS + T+ +T AS VS+ KAPV+M+L+P FT + KF+HVVRDGRD+A S NQ+PV KF++ T+ N K +A ++A++LWN WN WA + +DYL++ TEDL+ + VK DV + FVGSP S K+LCC+ ++++D G+ Sbjct: 132 PIILLVGGSDGSGTRGMVDILKNELYVDFIIEDPATLDVHGQIMYDKRGWPELVLQVLNVTNGHIDYEFNTTNTNTSLFSFQKQQDIKKNIMKLLEYIQRRYIMGKERGLKMAVKKAFQDHMNMNKSNNANTNIANIANSNNRRTILSRTISIPTPIPNTLSNITTKKNNATINNXXXXXXMNAXXXXXXXXXXXXXXPYEASKVSYAFKAPVTMLLLPIFTSIIDTIFIENNNINNDDSDVDKSLLYQYPKVKFIHVVRDGRDVALSSNQSPVNKFYNATYPNDYKVRQALYGHDPDIQSVRAMQLWNDWNIQTRSWAIKNP---NKIDYLMIRTEDLIGSKSGNTKVKYDVLLALSNFVGSPRSRKELCCLTYKQSKDYGT 511 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7648.3.1 >prot_C-tenellus_contig7648.3.1 ID=prot_C-tenellus_contig7648.3.1|Name=mRNA_C-tenellus_contig7648.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=499bp MLMRPYQDIPSMKHQISGDSSKKVRRRSVGHVNNMYGGMATLAAGFVIAFback to top mRNA from alignment at C-tenellus_contig7648:3149..5674+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7648.3.1 ID=mRNA_C-tenellus_contig7648.3.1|Name=mRNA_C-tenellus_contig7648.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2526bp|location=Sequence derived from alignment at C-tenellus_contig7648:3149..5674+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7648:3149..5674+ >mRNA_C-tenellus_contig7648.3.1 ID=mRNA_C-tenellus_contig7648.3.1|Name=mRNA_C-tenellus_contig7648.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1497bp|location=Sequence derived from alignment at C-tenellus_contig7648:3149..5674+ (Choristocarpus tenellus KU2346)back to top |