mRNA_C-tenellus_contig7648.3.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7648.3.1
Unique NamemRNA_C-tenellus_contig7648.3.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A6H5L0U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U6_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 2.830e-113
Identity = 174/296 (58.78%), Postives = 216/296 (72.97%), Query Frame = 1
Query:  607 MFG--PTQARRVISNDPAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDL---EAPLKAIRLWNKWNTGLYEWAKQKQVHG-TGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVR 1476
            MFG   +  R  + + P +IR PVPL+VGG+DGSGTRGVVALLQ+L VPMV+ED GT+DVHGAPYM K GWP +V P++ W+ G+ YE+  A   LR  T  A+  L  +M+K   K  ++  + A YVSWG KAPVSM+LVPFF EAWG    KFLHVVRDGRD+AFSGNQTPVEKF+   F    ++    E  +KA+ LWN WN G++ WA  ++  G TGLDYLLLH EDL+DPE  FAA+KDVAEFVGSPLSD DLCCIA E ++DMGSH+K++++R   +TSRFGKWK R
Sbjct:    1 MFGGLTSPLRPWLESQPGLIREPVPLIVGGSDGSGTRGVVALLQQLKVPMVVEDRGTMDVHGAPYMDKGGWPAVVSPVIGWAKGTGYESRSAPAQLRRKTFDALGGLKAQMQKMTGKSRSIGGEAAKYVSWGFKAPVSMVLVPFFEEAWGKA--KFLHVVRDGRDIAFSGNQTPVEKFYADMFPEGTRESGFKEPSVKAMALWNSWNVGVHHWAASRKERGATGLDYLLLHAEDLIDPEAKFAAIKDVAEFVGSPLSDFDLCCIATEGSKDMGSHTKSQKDRGK-ITSRFGKWKAR 293          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: D8LQ47_ECTSI (APPLE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ47_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 5.240e-110
Identity = 171/285 (60.00%), Postives = 211/285 (74.04%), Query Frame = 1
Query:  628 RRVISNDPAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDL---EAPLKAIRLWNKWNTGLYEWAKQKQVHG-TGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWK 1470
            R  + + P +IR PVPL+VGG+DGSGTRGVVALLQRL VPMV+ED GT+DVHGAPYM K GWP +V+P++ W+ G+ YE+  A   LR  T  A+  L  +M+K A K      + A +VSWG KAPVSM+LVPFF EAWG    KFLHVVRDGRD+AFSGNQTPVEKF+   F    ++    E  +KA+ LWN WN G++ WA  ++  G TGLDYLLLH EDL+DPE  FAA+KDVAEFVGSPLSD DLCCIA E ++DMGSH+K++++R   +TSRFGKWK
Sbjct:   10 RPSLGSQPGLIREPVPLIVGGSDGSGTRGVVALLQRLKVPMVVEDRGTMDVHGAPYMVKGGWPAVVRPVIGWAKGAGYESRGAPAQLRRKTFDALGGLKVQMQKMAGKSRPTGGEAAKHVSWGFKAPVSMVLVPFFEEAWGKA--KFLHVVRDGRDIAFSGNQTPVEKFYADMFPEGTRESGFKEPSVKAMALWNSWNVGVHHWAASRKERGATGLDYLLLHAEDLIDPEAKFAAIKDVAEFVGSPLSDFDLCCIATEGSKDMGSHTKSQKDRGK-ITSRFGKWK 291          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A482SCK3_9ARCH (APPLE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCK3_9ARCH)

HSP 1 Score: 191 bits (486), Expect = 5.380e-50
Identity = 114/301 (37.87%), Postives = 174/301 (57.81%), Query Frame = 1
Query:  676 LVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKT---------------ASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDL-EAPLKAIRLWNKWNTGLYEW--AKQKQVHGT-------GLDYLLLHTEDLLDPEHN--FAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVRGRLEVGV 1497
            L+VGGTDGSGTR VV +L  LGV MV ED  T D+H        GWP +V+P+L+ +H  NY+  D    +   T+ AV     K+ + AQK  T P+ +               AS + +G KAPV+M L+P++T        KFLHV+RDGRD+AFS NQ PVEKF++  ++    D+ +  ++AI+LW+ WN G+ +W  A  + +  T       G  Y++LH+ED++ P+    + A+  +A +VGS +S   +CC+A++ +  MGSH ++  + AV V+ R+GKW+   R   G+
Sbjct:  127 LIVGGTDGSGTRRVVQVLTDLGVTMVSEDPETYDIHAD---LVSGWPPVVKPVLKHTHTLNYKPEDLPKHVNQQTIAAVR----KITEQAQKDSTKPQSSRLAVGGALNIKTHAHASAIQYGFKAPVAMTLLPYWTSVLPR--VKFLHVLRDGRDIAFSANQGPVEKFYEDMYAKHAADVKDKRVQAIQLWSDWNVGILQWSLAYVQSLSNTNTSSSDKGYGYMMLHSEDIVSPDMQVRYEAMAKLAMYVGSDMSADRICCMAVKDSTFMGSHDRS--QHAV-VSKRYGKWEGYTRNNKGL 415          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A1Z5JYM4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYM4_FISSO)

HSP 1 Score: 189 bits (479), Expect = 5.760e-50
Identity = 112/303 (36.96%), Postives = 165/303 (54.46%), Query Frame = 1
Query:  661 RHPVPL-VVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMK------------KSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDL----EA---------PLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVRGRLEV 1491
            R  +PL ++GG+DGSGTR  V +L  L VPM+++D  TLD+H   +   +GWP LV  ++  +H + YE SD S +++       D L  +M+            +   + H   ++    + +G KAPVSM+L+P   E +  E  KFLHV+RDGRD+A S N +PV+KF+ T + N  + +    EA          + A++LWN WNT +YE+          +DYL + TEDLL+P   F A++ VAEFVGSPLS   LCC++ ++  DMG     K     G     G+  VR +LE 
Sbjct:    6 RSKLPLLIIGGSDGSGTRAFVDVLGHLHVPMLVDDKATLDIHAPCFYHGDGWPHLVNRVMNETHSARYEFSDLSPSVQ-------DELHEQMRICFREHYAPRALRLLMEAHKKGKELPHRIRYGFKAPVSMLLLPVLLETF--ENIKFLHVIRDGRDIALSSNTSPVDKFYRTFYPNAAEQVTMLHEALGNDTVSVKQVMAMQLWNDWNTQVYEFGTSHP----SIDYLPIKTEDLLNPVTRFEAIQQVAEFVGSPLSTAQLCCLSQKELHDMG-----KSMNFQGKQENSGRPDVRTQLEA 290          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7S2TNP4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TNP4_9EUKA)

HSP 1 Score: 161 bits (407), Expect = 4.040e-39
Identity = 113/322 (35.09%), Postives = 160/322 (49.69%), Query Frame = 1
Query:  517 ASPTGRSTPGSLALTKEEGDNVPFGLPGEPMFGPTQARRVISNDPAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKD----LEAPLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWK 1470
            AS   +  PGS    +    ++P G     + G           P  I    P++VGGTDGSGTR VV LL  L V MV +D  T DVH        GWP +V+  L +SHG+NY+  D     R+    ++ R   KMKK A++   +      +  WG KAP++ +L+PF  E +   GF F+ V+RDGRDL FS NQ+PV+KF+ T +    KD    L+   KAIR+W+  NT +  +    QV   G  YL +  E+ ++ E          E +      +D+CC    + R   SH K K +   GV SR+GKW+
Sbjct:  182 ASTDMKKDPGSTLFRRVSMADLPDGTTSAELVGEENVL-----PPKDISEEPPIIVGGTDGSGTRAVVTLLSNLNVLMVKDDACTFDVHAGEM---GGWPPVVRRALRFSHGANYKPEDIPENDRAYLRRSLKRFADKMKKEAKRFSRMKR----HERWGFKAPIAQMLLPFLDEVF--PGFSFVQVLRDGRDLPFSKNQSPVDKFYVTMYKG-AKDSYLNLDPKFKAIRMWSDANTQVQTYMNTVQVP-KGSIYLRMKIENSVEEESLLQMGYVCNEKLKLGYKREDMCC----RLRGYISHLK-KADFFRGVKSRYGKWE 482          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7R9U6Q8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Q8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.650e-36
Identity = 100/303 (33.00%), Postives = 147/303 (48.51%), Query Frame = 1
Query:  676 LVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSH---GSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGN--EGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTF-SNQGKDLEAPLKAIRLWNKWNTGLYEWAKQK------------------------------QVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVR 1476
            L+V GTDGSGTR +V LL  LGV M+ E+  T DV  A      GW ++VQP+L  +    G++Y   D    +R+  +  V+        +A        K     SWG KAP+SM+ +P F  A     +G + LHV+RDGRDL+FSGNQ+PV+K +     +   K   A   A++LW++ N G + +A++                                +    L YLL+  ED +  +   A V+ VA FVG+P   + +C +      D+GSH K    R  G+ +RFGKWK +
Sbjct:  141 LIVCGTDGSGTRSIVNLLAHLGVRMIDENRSTRDVE-AWKGDLGGWDKIVQPLLPHTAAGGGADYNVEDLPEDVRTQVVQWVNEFLDLYTPAAL------SKGGVKASWGFKAPISMLTIPVFAHALAQRGQGLRVLHVLRDGRDLSFSGNQSPVQKLWHPLHPTTSAKQFGAEAAALQLWDENNVGAWSFARRNAAKPGPVEVALSATEAIQVPPELAAASRMPSLKEAFLGYLLVRIEDFVFKDRKAALVQRVAAFVGAPTDKESVCRVVRLPATDLGSHGKV--NRRAGLAARFGKWKEK 434          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7R9WRJ1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRJ1_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.210e-34
Identity = 99/268 (36.94%), Postives = 140/268 (52.24%), Query Frame = 1
Query:  670 VPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDLEAPLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDMGSHSKTKEERAVGVT---SRFGK 1464
            VPLV+ GTDGSGTRGV A+LQ+LGVP+V++D   LDVH A      GW  LV+  L  SH       D    L    L  +   +   ++ A   H     T   VS+  KAP++M L+P     +    FK +HVVRDGRD+AFS NQ+PV K+++      G D     KA+RLWN WN   + W +         +YL++ +EDL+ P    A ++ +A FV +P     + C +L +    GS+ K K+    G+    +R GK
Sbjct:   61 VPLVMVGTDGSGTRGVAAILQQLGVPLVVDDFVQLDVHAASI---GGWTPLVRSAL--SH------KDIDAVLSQYLLRELPPRWD--QQYATHEHAAMSPT---VSFAFKAPIAMTLIPQLRRIFDGR-FKLVHVVRDGRDIAFSDNQSPVNKYYEVVHGKDGSDTHC--KAMRLWNDWNVQAHRWMRDDP------NYLVVRSEDLMSPRRG-AVLQRLARFVDAP----GVPC-SLREVPQRGSYGKWKQLADAGMLQELNRIGK 297          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7S1GKE0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKE0_CYCTE)

HSP 1 Score: 129 bits (324), Expect = 8.030e-31
Identity = 73/209 (34.93%), Postives = 115/209 (55.02%), Query Frame = 1
Query:  820 LVQPILEWSHGSNYETSDASMTLRSTTLMAVDRLFTKMKKSAQ--------KVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTF------SNQGKDLEAPLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDKDLCCIALEKTRDM 1404
            L + +L+ +H ++Y+  D S  L+          F K+KK           ++       A +V +G KAP++M+LVP   E  G    K+LH+VRDGRD+AFS NQ+PV+K + T +      S +     + ++ + LWN WNT L +W K+    G   D+L++ TEDLLDP   F ++  +A FVGS +S +++CC++   T DM
Sbjct:    2 LAKAVLQETHSASYKFGDLSHFLQD----GAKEEFQKLKKRIDFQKGAAYGRLRHNDVTPARWVEYGFKAPITMVLVPILREVLGP--MKYLHIVRDGRDVAFSTNQSPVKKLYHTMYQDARLRSYKYSGNLSWVRGVHLWNDWNTQLLQWEKENA--GDRFDFLVVRTEDLLDPAKRFDSLLQLAHFVGSSISTEEICCLSQSATVDM 202          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A7S1FP45_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP45_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.150e-30
Identity = 103/401 (25.69%), Postives = 171/401 (42.64%), Query Frame = 1
Query:  649 PAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDGGTLDVHGAPYMAKE---------GWPELVQPILEWSHGS-NYETSDASMTLRSTTLMAVDRLFTKMKKSAQKVHT----------------------------------------------------------------------------------LPEKTASYVSWGLKAPVSMILVPFFTEAW-----GN---------EGFKFLHVVRDGRDLAFSGNQTPVEKFFDTT---FSNQGKDLE---APLKAIRLWNKWNTGLYEWAKQKQVHG----------TGLDYLLLHTEDLL--DPEHNFAAVKDVAEFVGSPLSDKDLCCIAL-EKTRDMGSHSKTKEERAVGVTSRFGKWKVR 1476
            P I++ P+PL+VGG+DGSGTR +V++L  L  P + +   T DV G                GWP +V+  +++  G  NY     S+    T+L+ V+R+ T  +++ + + T                                                                                  +P+  +  +S+G+KAP SM+++P   + +     GN         +GFKF+HV+RDGRD+AFS NQ+PV KFFD      +N   D E     + A++LWN +N   + W K+++             +  DY  +  ED +  D    F   K +A  +GSPL+D ++CC+A  E+   +G+ ++T ++  V     +GKWK +
Sbjct:   98 PKILKSPIPLIVGGSDGSGTRSIVSILIDLCAPFLFQTESTFDVEGTEMTFNRSIESRILDVGWPGIVREGIKYGRGVVNYSLDHGSL---KTSLVGVERMITAHERAVEVIETCMNETSKNFRCRRIPDPRIVGINKRQNIRRSSPDRRRRSAFRNQEHSRRLLSRKSFRERQHNXXXXXNSRAKIPRGLRYNFAIPKNRSMDISYGIKAPASMLMLPLLDQIYSSSGSGNGASDSNRNEKGFKFIHVLRDGRDVAFSKNQSPVNKFFDLVNPEANNMRLDAEEVPCEICAMQLWNDFNVQAHNWLKERKKRDKERDSTDPVKSRFDYATVRVEDTMSDDISVRFNTFKSLATLIGSPLTDDEICCVAKKERNIKIGNTAETIQKHEV-----YGKWKKK 490          
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Match: A0A1E7EYM7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYM7_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.100e-28
Identity = 112/383 (29.24%), Postives = 161/383 (42.04%), Query Frame = 1
Query:  667 PVPLVVGGTDGSGTRGVVALLQR-LGVPMVIEDGGTLDVHGAPYMAKEGWPELVQPILEWSHGS---NYETSDASMTLRSTTL----------------------------MAVDRLFT---KMKKS------------AQKVHTLPEKT---------------------------------------------------ASYVSWGLKAPVSMILVPFFTEA-----------------------WGNEGFKFLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDLEA---------PLKAIRLWNKWNTGLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVK-DV----AEFVGSPLSDKDLCCIALEKTRDMGS 1410
            P+ L+VGG+DGSGTRG+V +L+  L V  +IED  TLDVHG     K GWPELV  +L  ++G     + T++ + +L S                               MAV + F     M KS            +    T+  +T                                                   AS VS+  KAPV+M+L+P FT                         +     KF+HVVRDGRD+A S NQ+PV KF++ T+ N  K  +A          ++A++LWN WN     WA +       +DYL++ TEDL+  +     VK DV    + FVGSP S K+LCC+  ++++D G+
Sbjct:  132 PIILLVGGSDGSGTRGMVDILKNELYVDFIIEDPATLDVHGQIMYDKRGWPELVLQVLNVTNGHIDYEFNTTNTNTSLFSFQKQQDIKKNIMKLLEYIQRRYIMGKERGLKMAVKKAFQDHMNMNKSNNANTNIANIANSNNRRTILSRTISIPTPIPNTLSNITTKKNNATINNXXXXXXMNAXXXXXXXXXXXXXXPYEASKVSYAFKAPVTMLLLPIFTSIIDTIFIENNNINNDDSDVDKSLLYQYPKVKFIHVVRDGRDVALSSNQSPVNKFYNATYPNDYKVRQALYGHDPDIQSVRAMQLWNDWNIQTRSWAIKNP---NKIDYLMIRTEDLIGSKSGNTKVKYDVLLALSNFVGSPRSRKELCCLTYKQSKDYGT 511          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7648.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0U6_9PHAE2.830e-11358.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ47_ECTSI5.240e-11060.00APPLE domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A482SCK3_9ARCH5.380e-5037.87APPLE domain-containing protein n=1 Tax=archaeon T... [more]
A0A1Z5JYM4_FISSO5.760e-5036.96Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2TNP4_9EUKA4.040e-3935.09Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7R9U6Q8_9STRA2.650e-3633.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9WRJ1_9STRA3.210e-3436.94Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1GKE0_CYCTE8.030e-3134.93Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S1FP45_9STRA1.150e-3025.69Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A1E7EYM7_9STRA1.100e-2829.24Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7648contigC-tenellus_contig7648:3149..5674 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQ47
Model size1807
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1e-111
EggNOG OGs2D47D@1|root,2SU61@2759|Eukaryota
Cds size1497
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790049.6761067-UTR-C-tenellus_contig7648:3148..31631680790049.6761067-UTR-C-tenellus_contig7648:3148..3163Choristocarpus tenellus KU2346UTRC-tenellus_contig7648 3149..3163 +
1680790049.730631-UTR-C-tenellus_contig7648:5379..56741680790049.730631-UTR-C-tenellus_contig7648:5379..5674Choristocarpus tenellus KU2346UTRC-tenellus_contig7648 5380..5674 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790049.6891754-CDS-C-tenellus_contig7648:3163..40871680790049.6891754-CDS-C-tenellus_contig7648:3163..4087Choristocarpus tenellus KU2346CDSC-tenellus_contig7648 3164..4087 +
1680790049.7050176-CDS-C-tenellus_contig7648:4483..48551680790049.7050176-CDS-C-tenellus_contig7648:4483..4855Choristocarpus tenellus KU2346CDSC-tenellus_contig7648 4484..4855 +
1680790049.7217371-CDS-C-tenellus_contig7648:5178..53791680790049.7217371-CDS-C-tenellus_contig7648:5178..5379Choristocarpus tenellus KU2346CDSC-tenellus_contig7648 5179..5379 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7648.3.1prot_C-tenellus_contig7648.3.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7648 3164..5379 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7648.3.1

>prot_C-tenellus_contig7648.3.1 ID=prot_C-tenellus_contig7648.3.1|Name=mRNA_C-tenellus_contig7648.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=499bp
MLMRPYQDIPSMKHQISGDSSKKVRRRSVGHVNNMYGGMATLAAGFVIAF
MWVQHAVLRSETISVRGTPIAEGGTERWKGDKWNTHNDGSELLNLLARAE
TLEAELLRKRNQLGLSFDVKLDDGITGVALGSTLRDLLGAASTPVKRHIN
GEYQGVTSTNEYQVEEHASPTGRSTPGSLALTKEEGDNVPFGLPGEPMFG
PTQARRVISNDPAIIRHPVPLVVGGTDGSGTRGVVALLQRLGVPMVIEDG
GTLDVHGAPYMAKEGWPELVQPILEWSHGSNYETSDASMTLRSTTLMAVD
RLFTKMKKSAQKVHTLPEKTASYVSWGLKAPVSMILVPFFTEAWGNEGFK
FLHVVRDGRDLAFSGNQTPVEKFFDTTFSNQGKDLEAPLKAIRLWNKWNT
GLYEWAKQKQVHGTGLDYLLLHTEDLLDPEHNFAAVKDVAEFVGSPLSDK
DLCCIALEKTRDMGSHSKTKEERAVGVTSRFGKWKVRGRLEVGVDGKT*
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mRNA from alignment at C-tenellus_contig7648:3149..5674+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7648.3.1 ID=mRNA_C-tenellus_contig7648.3.1|Name=mRNA_C-tenellus_contig7648.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2526bp|location=Sequence derived from alignment at C-tenellus_contig7648:3149..5674+ (Choristocarpus tenellus KU2346)
GTTCAAGAGGAGAAAATGCTGATGAGACCTTATCAAGACATCCCTTCGAT GAAGCACCAGATCTCTGGTGACTCATCGAAGAAGGTACGACGAAGGTCAG TCGGCCATGTGAACAATATGTACGGGGGGATGGCAACACTCGCTGCGGGT TTTGTCATTGCGTTCATGTGGGTACAGCACGCTGTCCTTCGCTCGGAAAC GATTTCTGTAAGGGGGACGCCAATAGCTGAGGGGGGCACAGAGAGATGGA AGGGAGACAAATGGAACACTCATAATGACGGTTCCGAACTGTTGAATCTC TTAGCTAGAGCAGAGACCCTTGAGGCGGAATTATTGCGAAAAAGGAATCA ACTGGGTTTATCTTTTGATGTTAAGTTGGACGATGGCATAACGGGGGTTG CTTTGGGCAGCACTCTAAGGGATCTACTCGGGGCAGCTTCAACCCCAGTA AAGCGACATATTAATGGAGAATACCAGGGTGTTACATCAACGAATGAGTA TCAGGTCGAAGAACACGCGTCGCCCACAGGCCGTTCAACACCTGGTTCAT TAGCCCTAACAAAGGAAGAAGGGGACAATGTACCGTTTGGTCTTCCCGGC GAACCGATGTTTGGCCCCACACAGGCTCGTCGAGTGATTTCCAATGATCC TGCCATTATCCGACATCCAGTACCGCTGGTGGTTGGGGGAACAGATGGAT CGGGGACGCGCGGAGTGGTGGCGCTGCTGCAACGATTGGGAGTTCCCATG GTCATTGAGGATGGTGGTACACTGGATGTACATGGTGCACCATACATGGC CAAAGAGGGGTGGCCGGAGCTTGTGCAACCGATACTAGAGTGGTCACATG GGTCGAATTACGAAACCTCGGATGCATCAATGACCCTACGCTCTACCACA CTCATGGCAGTGGACAGATTATTCACTAAGATGAAGAAGGTACACTTTTG TTCTTGTCAGAGTTTGCTCTAGGTTCAGTAGACTGAGTGACTTAGTCTGT ATCGTGCCCTTTCCACTCAGTACAATTTAGCTGGACGGTACAACTACTAA GCTGCTGTATTTGATCTGATAGTCAGGTAGTGGTTAGTCGTCACAGGTTT TGTCATAACATTGACCTATGGTTTCACTGTATCTGTTGGCGTGTTCTTCT ACTGTGCCTGTATCTTCCAGGCTAACCTCTTTTTGCCTATGATACTTCCA GAGTCGATCGTTCCACATATATATATATATATATATATATATATCCTTGC CGATTGTGGACTATCACATGATAATATTGCTAACCCCCTTACTCATGGTG TTGATTTTTTAATTTCCCTCTGTTGCCACATGCAGTCCGCACAAAAGGTC CACACTCTGCCAGAGAAAACTGCTAGCTATGTAAGCTGGGGACTCAAGGC TCCTGTGTCTATGATTTTAGTTCCCTTCTTCACAGAGGCATGGGGAAATG AAGGGTTCAAGTTCTTACATGTGGTTCGTGATGGACGCGACCTTGCCTTT TCAGGTAACCAAACACCTGTTGAGAAGTTCTTTGATACCACATTTTCTAA TCAAGGTAAGGATTTGGAGGCTCCCCTGAAGGCCATTAGGTTGTGGAACA AGTGGAATACTGGGCTGTACGAGTGGGCCAAGCAGAAGCAGGTTCACGGA ACAGGTCTTGACTACCTCCTGCTCCACACAGAAGATCTCCTGGACCCAGA ACACAATGTAAGGCCCCCTCATGGTCCTGATTTTCAGTTTTTGACCAACG TTTGATGGATATAGAGAATAAGTCGTGACATTTTAATTGAAGTCTCTGTG CTGAATACCCTTTGTTGCTTGTAGTGAGTGTAACTGTGTCTCCTGCTGAT ACAGACCTCCATTTGCAAGCAAGATCGGCCTGCCTTCAACAATCTTTTGT ACCATAACACCTAGTAGACAGTCTCCCCCTGTCATCTCATTGAGACCGGC GCGGTAGCCCTACCTGACTCTTGCCCCCCACTCCATCCTCCCTTCCTCAC TCCTCCTCCCCTTTACCTGGCCAAGAACAGTTTGCGGCAGTGAAGGACGT GGCAGAGTTTGTTGGATCCCCCCTGTCTGACAAAGACCTTTGCTGTATTG CCTTGGAGAAAACAAGGGACATGGGCTCTCACAGCAAGACGAAGGAGGAG AGAGCTGTTGGTGTCACCAGTAGGTTTGGAAAGTGGAAGGTGCGGGGGAG GCTTGAAGTTGGGGTAGATGGAAAGACATAGGGTTAGGGCTAGGGTGAAA TTCAGGGTTAATGGAAAGGTTGGGGAGGGTAGGATGGAACAAGAGGCATT GGGCTAGGATAAAGGCATACAGCGTTTCCGATTGACTGGGTATTGTTTGT ATGTGTGTGTGACGGGATCTGTCGTGTGGGTAATTTAAATGTTGGTCGTG TGTTTTTGTGCAAGGTTTGGCATGACTTTGTTGTGATCTTATCACACTGT CGGAGGAACATATGTTGGTTTGCACAGGCGCCCTTGGTTCTTTTGCTTTT CACAGGTGAGATTTTTTTTGTCTGCG
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Coding sequence (CDS) from alignment at C-tenellus_contig7648:3149..5674+

>mRNA_C-tenellus_contig7648.3.1 ID=mRNA_C-tenellus_contig7648.3.1|Name=mRNA_C-tenellus_contig7648.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1497bp|location=Sequence derived from alignment at C-tenellus_contig7648:3149..5674+ (Choristocarpus tenellus KU2346)
ATGCTGATGAGACCTTATCAAGACATCCCTTCGATGAAGCACCAGATCTC
TGGTGACTCATCGAAGAAGGTACGACGAAGGTCAGTCGGCCATGTGAACA
ATATGTACGGGGGGATGGCAACACTCGCTGCGGGTTTTGTCATTGCGTTC
ATGTGGGTACAGCACGCTGTCCTTCGCTCGGAAACGATTTCTGTAAGGGG
GACGCCAATAGCTGAGGGGGGCACAGAGAGATGGAAGGGAGACAAATGGA
ACACTCATAATGACGGTTCCGAACTGTTGAATCTCTTAGCTAGAGCAGAG
ACCCTTGAGGCGGAATTATTGCGAAAAAGGAATCAACTGGGTTTATCTTT
TGATGTTAAGTTGGACGATGGCATAACGGGGGTTGCTTTGGGCAGCACTC
TAAGGGATCTACTCGGGGCAGCTTCAACCCCAGTAAAGCGACATATTAAT
GGAGAATACCAGGGTGTTACATCAACGAATGAGTATCAGGTCGAAGAACA
CGCGTCGCCCACAGGCCGTTCAACACCTGGTTCATTAGCCCTAACAAAGG
AAGAAGGGGACAATGTACCGTTTGGTCTTCCCGGCGAACCGATGTTTGGC
CCCACACAGGCTCGTCGAGTGATTTCCAATGATCCTGCCATTATCCGACA
TCCAGTACCGCTGGTGGTTGGGGGAACAGATGGATCGGGGACGCGCGGAG
TGGTGGCGCTGCTGCAACGATTGGGAGTTCCCATGGTCATTGAGGATGGT
GGTACACTGGATGTACATGGTGCACCATACATGGCCAAAGAGGGGTGGCC
GGAGCTTGTGCAACCGATACTAGAGTGGTCACATGGGTCGAATTACGAAA
CCTCGGATGCATCAATGACCCTACGCTCTACCACACTCATGGCAGTGGAC
AGATTATTCACTAAGATGAAGAAGTCCGCACAAAAGGTCCACACTCTGCC
AGAGAAAACTGCTAGCTATGTAAGCTGGGGACTCAAGGCTCCTGTGTCTA
TGATTTTAGTTCCCTTCTTCACAGAGGCATGGGGAAATGAAGGGTTCAAG
TTCTTACATGTGGTTCGTGATGGACGCGACCTTGCCTTTTCAGGTAACCA
AACACCTGTTGAGAAGTTCTTTGATACCACATTTTCTAATCAAGGTAAGG
ATTTGGAGGCTCCCCTGAAGGCCATTAGGTTGTGGAACAAGTGGAATACT
GGGCTGTACGAGTGGGCCAAGCAGAAGCAGGTTCACGGAACAGGTCTTGA
CTACCTCCTGCTCCACACAGAAGATCTCCTGGACCCAGAACACAATTTTG
CGGCAGTGAAGGACGTGGCAGAGTTTGTTGGATCCCCCCTGTCTGACAAA
GACCTTTGCTGTATTGCCTTGGAGAAAACAAGGGACATGGGCTCTCACAG
CAAGACGAAGGAGGAGAGAGCTGTTGGTGTCACCAGTAGGTTTGGAAAGT
GGAAGGTGCGGGGGAGGCTTGAAGTTGGGGTAGATGGAAAGACATAG
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