|
Homology
BLAST of mRNA_C-tenellus_contig763.1.3 vs. uniprot
Match: D8LFP8_ECTSI (Similar to peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFP8_ECTSI) HSP 1 Score: 217 bits (552), Expect = 2.460e-61 Identity = 113/202 (55.94%), Postives = 146/202 (72.28%), Query Frame = 2
Query: 5 RLAARVERHLPCNRPSTVREFGAMMDKVVGNILASPTDPKFRELRALNKTVLRSIINCHGGREMLHLLGFERISKYGEPVYFLSDPQVDHLTEARVWLAQRVEGCLSMATQRSAPTGGGNDSCADCVITVKLTSGRVLEGGFFAHETIKNVYEFLHASVVNSSEDLRLCHGSPPQ-QLGEDMLGVTLKETNFMPTATLEVVK 607
RL RV RHLPCN V +F + KVV NIL++P D KFRELRA NKT+ R++++CHGGRE L LLGFE+I+K GE VYFL++P VDHLT+A+ WLA+RV+ C ++S + GG +CAD V+TV LTSG+ LEGGF+ HETI +VY FL +SVVN EDLRL + P+ +LGE ML ++L + +P ATL VVK
Sbjct: 12 RLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADVKFRELRANNKTIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSC-----EQSEGSVGGR-ACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVNGGEDLRLRTTTVPETELGEQMLPMSLADAKLLPRATLAVVK 207
BLAST of mRNA_C-tenellus_contig763.1.3 vs. uniprot
Match: A0A835ZG04_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG04_9STRA) HSP 1 Score: 195 bits (496), Expect = 9.840e-53 Identity = 106/261 (40.61%), Postives = 160/261 (61.30%), Query Frame = 2
Query: 5 RLAARVERHLPCNRPSTVREFGAMMDKVVGNILASPTDPKFRELRALNKTVLRSIINCHGGREMLHLLGFERISKYGEPVYFLSDPQVDHLTEARVWLAQRVEGCLSMATQRSAPTGGGNDSCADCVITVKLTSGRVLEGGFFAHETIKNVYEFLHASVVNSSEDLRLCHGSPPQQLGEDMLGVTLKETNFMPTATLEVVKTK-----SLQALGKAVPGAVDEATKAAEDLNMLMRHRDTTRREKEKEKAKLVAEFLADHE 772
RL RV RH+PCN P VR F K++ NI+ +P +PK+RELRA N V ++ HGG+E LHLLGFE+I K+GE VYF+++ +++LT+A+ WL Q+ ++MA G +CA+CVI V+LTSG+ LEGGF+AHET++ VY+F+ +SVVN+ E L L D L +TL++ P A L+VVK+ + +A+ +A A + +A E L M+ + + ++ EKA++++EF D E
Sbjct: 12 RLLVRVGRHIPCNAPEAVRVFLDAASKMLDNIMKAPEEPKYRELRAANAAVSAKLLQPHGGKEFLHLLGFEKIFKHGEAVYFMTEVDLEYLTQAKQWLQQQAAAAMAMAPAEVP----GAQACAECVIQVRLTSGQTLEGGFYAHETVRAVYDFVRSSVVNAEEAL-LLRAPGHHSFTADKLDMTLQDAGLAPRAVLQVVKSGPEEGGAAEAMEEARRRARQQEREAHEQLRMIKETKMKEQVARDAEKARILSEFKHDRE 267
BLAST of mRNA_C-tenellus_contig763.1.3 vs. uniprot
Match: A0A7S3TPZ0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TPZ0_9SPIT) HSP 1 Score: 56.6 bits (135), Expect = 1.100e-5 Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 2
Query: 71 AMMDKVVGNILASPTDPKFRELRALNKTVLRSIINCHGGREMLHLLGFE 217
A + K++ N+L+SPT+PK+R L+A NK V I++C GGR++L GFE
Sbjct: 57 ATIIKIIANVLSSPTEPKYRALKAENKAVKEKILSCPGGRQLLLAAGFE 105
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Seed ortholog | 135651.CBN01497 |
Preferred name | UBXN6 |
PFAMs | PUB,UBX |
Model size | 2562 |
Max annot lvl | 33208|Metazoa |
KEGG ko | ko:K14011 |
KEGG Pathway | ko04141,map04141 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000323,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005829,GO:0005938,GO:0006508,GO:0006807,GO:0006810,GO:0006914,GO:0006950,GO:0007034,GO:0007041,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009966,GO:0009967,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010498,GO:0010646,GO:0010647,GO:0012505,GO:0016020,GO:0016192,GO:0016197,GO:0016236,GO:0019538,GO:0019898,GO:0023051,GO:0023056,GO:0030111,GO:0030163,GO:0030177,GO:0031090,GO:0031410,GO:0031901,GO:0031902,GO:0031982,GO:0032509,GO:0032510,GO:0032991,GO:0033554,GO:0034976,GO:0036503,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045177,GO:0045179,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0060828,GO:0061919,GO:0065007,GO:0071704,GO:0071944,GO:0071985,GO:0090263,GO:0097708,GO:0098588,GO:0098805,GO:0098852,GO:0099568,GO:0099738,GO:1901564,GO:1901565,GO:1901575,GO:1901698 |
Exons | 10 |
Evalue | 1.64e-07 |
EggNOG OGs | KOG2699@1|root,KOG2699@2759|Eukaryota,38BYE@33154|Opisthokonta,3BEM1@33208|Metazoa,3CTAX@33213|Bilateria,40D6S@6231|Nematoda,1KVVI@119089|Chromadorea,40UIS@6236|Rhabditida |
Ec32 ortholog description | UBX domain |
Ec32 ortholog | Ec-01_001370.1 |
Description | endosome to lysosome transport via multivesicular body sorting pathway |
Cds size | 897 |
COG category | O |
BRITE | ko00000,ko00001 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680790048.4667835-UTR-C-tenellus_contig763:87..926 | 1680790048.4667835-UTR-C-tenellus_contig763:87..926 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig763 88..926 - |
1680790048.4829822-UTR-C-tenellus_contig763:957..1782 | 1680790048.4829822-UTR-C-tenellus_contig763:957..1782 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig763 958..1782 - |
1680790048.5978346-UTR-C-tenellus_contig763:14586..14587 | 1680790048.5978346-UTR-C-tenellus_contig763:14586..14587 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig763 14587..14587 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680790048.4918108-CDS-C-tenellus_contig763:1782..1944 | 1680790048.4918108-CDS-C-tenellus_contig763:1782..1944 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 1783..1944 - |
1680790048.5036201-CDS-C-tenellus_contig763:2678..2756 | 1680790048.5036201-CDS-C-tenellus_contig763:2678..2756 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 2679..2756 - |
1680790048.5124228-CDS-C-tenellus_contig763:10031..10117 | 1680790048.5124228-CDS-C-tenellus_contig763:10031..10117 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 10032..10117 - |
1680790048.523292-CDS-C-tenellus_contig763:10775..10855 | 1680790048.523292-CDS-C-tenellus_contig763:10775..10855 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 10776..10855 - |
1680790048.5342863-CDS-C-tenellus_contig763:11469..11511 | 1680790048.5342863-CDS-C-tenellus_contig763:11469..11511 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 11470..11511 - |
1680790048.545572-CDS-C-tenellus_contig763:12496..12555 | 1680790048.545572-CDS-C-tenellus_contig763:12496..12555 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 12497..12555 - |
1680790048.5594065-CDS-C-tenellus_contig763:13512..13684 | 1680790048.5594065-CDS-C-tenellus_contig763:13512..13684 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 13513..13684 - |
1680790048.5717647-CDS-C-tenellus_contig763:14008..14142 | 1680790048.5717647-CDS-C-tenellus_contig763:14008..14142 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 14009..14142 - |
1680790048.582147-CDS-C-tenellus_contig763:14502..14586 | 1680790048.582147-CDS-C-tenellus_contig763:14502..14586 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig763 14503..14586 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig763.1.3 >prot_C-tenellus_contig763.1.3 ID=prot_C-tenellus_contig763.1.3|Name=mRNA_C-tenellus_contig763.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=299bp
MRLAARVERHLPCNRPSTVREFGAMMDKVVGNILASPTDPKFRELRALNK TVLRSIINCHGGREMLHLLGFERISKYGEPVYFLSDPQVDHLTEARVWLA QRVEGCLSMATQRSAPTGGGNDSCADCVITVKLTSGRVLEGGFFAHETIK NVYEFLHASVVNSSEDLRLCHGSPPQQLGEDMLGVTLKETNFMPTATLEV VKTKSLQALGKAVPGAVDEATKAAEDLNMLMRHRDTTRREKEKEKAKLVA EFLADHEGKVANTHPSRHATRYGVNDDIGGYEGEGSGFFYCLHCKVVH* back to topmRNA from alignment at C-tenellus_contig763:88..14587- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig763.1.3 ID=mRNA_C-tenellus_contig763.1.3|Name=mRNA_C-tenellus_contig763.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=14500bp|location=Sequence derived from alignment at C-tenellus_contig763:88..14587- (Choristocarpus tenellus KU2346) GATGAGACTTGCAGCTCGGGTTGAGCGCCATTTACCTTGCAACCGGCCTA
GTACGGTTCGAGAGTTCGGGGCGATGATGGACAAGGTGAATGACCCACTA
GTAGAAGCAGATTCGTGGAGGGGTAGCAAAGTTTGTGTAACTCTCTCGAA
GATTTGAGAAAGGGGGTGTTAAGCTAAAGGATTCATTCTAAAAGGATTTT
GGTGCAGTCAGTGAGGTCGGGTTGATAATATGCAATATTTTCTGTCAGTT
AATGCTGGCCTAGCGCTGGAAGGTGACCAAAGTGTCGATCTTTTAGTCAA
CTCCCGTTTTGACCCAACATCCTATCTTAACAACTCGAGGTTTGAAATGC
ACAACTTATTGGAGACAAAACCTGCTTGTAGACGCGAAACATTTGTAGGC
TCGACCTACTGCACCCCACCCCACGTTTGTTTCCCCAAAACATAGGTAGT
CGGCAATATTCTCGCTTCACCAACTGACCCCAAATTTCGCGAGCTTCGCG
CTCTCAACAAGACTGTACTGCGCAGCATAATAAACTGCCACGGTGGGAGG
GAGATGCTCCACCTACTAGGGTTCGAGAGGTGAGACTACGAGCTGTTTTC
CTAGAGCTGTATATCTGTGAGCGCTGAGACACACATAGAGGTGACTTGAT
AGTAGCAAGGTGGACACAAAACAGGGATATTCCCCACTATCTTTCCCCAC
AAAGCATGAAATACTCCTCCATCACACAGGATGGTGCTGACAGGTAGAAG
ATGACTCATTTTTTCATTATTGTCCGCGCTAATGTTTAATTAACCGATCC
TATCATACCACTAGGCTCAATGTCGGAGGTCCTTGCCTAACACACCCAAC
GAATTTACCGCCTCTCAATCCCTAATGGACATACTTGGGTGACTCCGAGT
CAGGATCTCCAAGTATGGGGAACCTGTGTACTTTCTTTCTGACCCTCAGG
TGGATCACCTCACAGAGGCAAGGGTCTGGCTAGCACAGCGAGTGGAGGGG
TGCTTGTCAATGGCAACGCAAAGATCTGCCCCCACTGGGGGAGGAAATGA
CTCATGTGCTGATTGTGTCATCACGGTAGGTATCAGCACTGTTCATGCCC
GTGCCATGCAACGGAGAACACCTGGTCTCTGTTTCCATATCTTGACCTGA
GAACCTTCAATGACTCAGGGGCGGGACATGAGTGTTCATGTGTCAAATAC
CTTTTTAGAGACAATATTACAGGAATATCGCATCAAGAAGAGTGGGATTC
GATATCATTGCAAAGAGGGCAATATTAGATCTTGTACAGAAGATCATTAT
CCACTAGTTGTCTTGTATATTTTTGTCTTTTTTATTGTGTGTTTGAAGCT
TGTACACAAAGAGCTCTAACAAAGACTTTTTGTGGATCCTTTCTTTTTGT
GCACTGTTGAGCACTAGTCAACAGTTCCTTACGTTATTGAGAGCAATCTG
GACGATGCACATTGCATCAGTTGTTTCTGTGGGAAGCAAAGTGAATCTAC
CTTCTTTGGTCCCTCAGATCTCTATCATGAATCTGTTGAAAGGGTGCATC
TTAGTCTTTGTTCAAGTCCCTTAGTCTTTCGGTCTTGAAATAGAACATGT
GCATTCTCATTGTGTAGATAGCCTGAGACCCTGAACAGTAGCACACACAG
TATTCTTGCCAATGCACCAAAGTGCCCTCTCCTTGGACTTTGTGAAATTT
TGACTTGAACACTGTTGGATAGGAACATATTGGTGGCAGCTCTCAGTGGG
AGCTACAATGTTGATGAGACTGGATGGATGAACTGTGCCCTTGAATGCCT
CACTACCCCTACCTTTGGTTGTTGCCATCTCCCCCTCCCCACCTGTTACA
CAACACACACAACACCCCTACACACATGCACATCTACACAATGGTTTTTT
TTTAATGCTCTGTTCTCTGCCTTTCCAACAAATTTTGTTTTAAGCCTATC
ATATTGTGCAGCAACTCAGGACACCTGGGTGATGTCATTTCTGGGTCCCT
GCCGGCTATGACCACCCTCTTTTTGTTATTAGGTGAAGCTGACAAGTGGG
CGGGTCCTAGAGGGAGGGTTCTTTGCCCACGAGACGATCAAGTAAGTCAA
ATGCGATCAAGTGGGGATGGAGATGGGGTATGTTAGGATAGAAGCGGGGG
TGGCTCTCTATTTTCCTTTGAAGGTCCCTGCCAGATATCCATTATGTGGT
CAGTATCTTACAGAGGGACTTGCGAGTTGTTTGCTGGCTATTCGGAGGAT
AGGTGCTCTGCGCAATCACAGTAAGGCACTAGAGTGTATACTCATGTACT
TGTAGACAAGAGCTGCAGAGTGATATTGATGTGGGGGTTGCGGCTTGGTT
CGTCATTGATGGATGTATCGAGTTGTTGAACCAATTGTTGACATGTGACA
TGATAACAAGCAGAGCACTCATCATTTCATGAGTGGATGTCTCATCGATG
CATATGAACGAACGACCCTTGAGGATTGGCAGCTCGTGTTTGACGTTATG
TTATATTTGGAGTCACAGCGCCCACAGCACCCAGGGCAACCATTGTAGAT
GAAGCACAGCATGCAAGAAGACGCCCTTGTCAAAAGTTGATGCACTCGTA
TCTCGTGTAGAATTATTATTATTATTATTATTATTATTATTATTATTATG
TTTGTTAAAGAGATAGTATCAGTACTTCTCCAACACATGCCAACAATCCC
TACCTTTTTGCCCTTTTCAACAGCACAAATCACCTTGTCAATTTTAGGAG
AACCGGTTCCTGAAGTCTAGGGGTAGAATTGACTTCATTCCTTTGACCAG
TGCCCGCCACCCTTCATCATCGCCTATAAACTCCTCGGACAACACACTCT
ACAGTGGCAGGTTATGCCAATGCCTCACATATTTCTGATTTCTCGTTGCA
CTATTGACACTATGTGCCATTCCCCAGTCCTTGCTCTCGTTGTAGTTAGC
ACTCGCTATACATCATGCGATAAGCATAGTAATTGGCAGTCATTTTCCCC
TGCGCCCCCCCCCCCCCCCCCCCCCCCCCCTGCACACACTCCACCTCCCT
TCCCTCATTCATTTCAATGCATCTAGGAATGTCTACGAGTTCCTTCACGC
CAGTGTTGTCAATAGCAGGTGAGATGATGCAGCAACCTTGTGTGTGATCT
GGGGGGGCAGGAAATGAAGGTATACTACTCTCCTAGGGCTGAAAAGAGTC
GGCAATTTCAGAGTGATTATTTTAGTCTACTTTGGATCAGCACGTTGTGG
GTTGTGGAGGAAATAGGAGAGAATAAATCGGTGGAAAGGTGCTAGCTCAC
CTTGCTGGGGAAGAGACTGGGTGTTTTGTTAGTTGATCTTATGCCTGCCC
ATTTCTCCCGTCAAGTATTGAGGGTTGTGAGATATACTGAGAAGGCTTTT
GTGTGTGTGTGTGTGTGTGTGTCCATATACTCAAGGGGAAAACAAGGTCC
AACAACTTGCAACTGTAGTATCTCCAAACCTTTGTAACCTCAATTCCAAC
CTCAAAATCGAAATTGAGACCTTGTGCACATTGCCTCAACCCCTTCCCCC
TTCTCCCAAAATAGCCCAAGGGGTCACCTCCTAATTCCCTAGTAGCTTAA
GAGAAGCACAGTCTAAGTTATGATGACATTGGCTCTTAGATCTAACATCT
CTCTGTCACTTCCACATTCTAGCCCTGGCTTAACTTATACATTCCAGTCT
TGTTCTCCGTTCTTGCCTCCTCCTTCGGCCAGTGAGGACTTGAGACTTTG
CCATGGATCACCACCGCAACAGCTGGGTGAAGACATGCTTGGTGTGACAC
TCAAAGAAACCAGTTGAGTTCATACTTTGTGCAGTCCCCCTCCTGCCCAC
ACGGTCTGCGTTTTCTTTAAACGGCAATATCTTTTGGCCCCGTTCCTGCC
CCCAAATAGAATAAAAGTATCAGCGAAGAACACCTTTTTAGATCTTCCAT
CAAATTTTCCCAGACATTAGATATTTCTGACTCTACTTAACGTAGTAACC
AACTTTCATCAGTCGTTCTGCTGTATTTCATGTATTGATTTCTATTCTTT
TCTTTGGCTGGATGGATTTATCAAGTGCCGTTGGCTTGGCGCTCAATTGG
CATGAAGCAAGAGCATATTTAAGTTGTACTTCAAAAGTACTCCAGGATAA
TTTGCAATATTTAAGTTTTAGGAGACATTCTCCATGGACACATCCATGGT
GAATCAAGAAGTCAGATCTATACTTTGAAGTAAAGGTACTCAACGCTGCT
GGGGGTCTCATTAGTTGTACCTTAGATCTTTTGAACTACAATGAAACTCC
ACCTGATGTTCTGAGTTGGTAATGACAAGGAAGAGTTTCGCAAGCAAGAT
CCTAGGTCTCATGATACTCACCAATGCTGATGCAGGCTCCTGCCGTGCAG
GCTCTTTGTCTCCACCCTTGGGAAGGAACTTGACTATTAACCTACCCGAC
CCATTGGTGCTATTTGTCAGACTTCATGCCAACCGCTACTTTGGAAGTTG
TGAAAACAAAGAGTTTGCAAGCATTGGGTAAGGCTGTGCCAGGAGCTGTG
GATGAGGTGAGGAGGGTTTTATCCCCACCTTCCCTCCCCCCCGTGTTGGT
GCAATGTTAATAGCAATGTGACATTGCTGCATCCAGTAAGTTACATGTAT
TAGGAACATGTTTTGGGGGTGAAAGAAGAGTTCTTAAGTGTATACATATT
GAAAGCCTCCATCTGTCTATGCAGCGATCAGTTTCTGCAACCCTTCATCT
GTACAACAATGCACTCTCTGAATCTATGAAGTGATACAAGAGGGATTTGT
AACAGTAGCAAGAGGCTTCAGTACTAGTGTGCATCTTTTCACCTATAGGG
ATAGAGAGGGACATATTTGTGTTTATATGTACATCTATAATGCTCTGATA
GTGTATCGTTGTAAGGCCATCAATCTGGAAAGGTGAAATGTGGCCGTACA
GTGCATCCATTTCGGAGTAGAGCTGTAGTAGTTAGATCTCGGATGCAAGA
AAACTGGAACGATCTGAACCTAGGTATAGAACAGGAAAGGCAAAAGGTTA
AAGAGAGATACACGGTTAGGACAGAGGGAGGTACTGGCAATGTGCAGGGA
CTAAGGAAACCCCACTGAGCCATTGTCCCAGTGGGCTGGGTAGGGCTTCT
GTAACAAATCCGATAGTTTCCTTCTTCAGCCCCAGGCCAGCATACACCAA
ACCCATCTCAGACCAAAAACTCTAACAACGCTTTTGTTCTTGCTGTCTCA
CCGCAGTCTTAAAGAAGATGTGCAGTTCAGATGAAGAAAGACCTGTGCAA
GAGTTCATTTGTGTGATCTTCACTTCGGCTGCGGTTTGTATTATATCCCC
CTGTCCCGTTTCTTTTTGTTCGCTGTGGTTGCTTGCCCTATCTTGGGTCC
TGTCATCTGTCTCGCCCAGACAACAAACAGAAGAAGTAACACGAACAATT
CTTCCCGAGAGTACTGCCCAAACCTCTACCTTGAGGCAGAGGCAGTCTAG
AATGAACTAAAGTGGTGTGCCAGAGCGCACATATGTAGCAGATGGTGTTT
TGTGCACATTTTAGGTATGCTCAGGTACGCCTCGAGTGATACTGGTGCTC
CTCTGTGCGGTATACGGGTGCACTGAACAACAATACAGCAGAAGGCCTTG
ACCTCTTGTCGTGTAGTACACTATGCCTGCCTACTATGCCTCTATGTATT
ATCACCTTTTTTGTAGGTACCACAGGAGACAGGGATCGCTGCCTGGACCT
CAAAGTCCAGATATCCGTTTGCCGTATGATGATATCAGATTTCATACTCA
ACCTCTGAAAGGACCACCAATTGACATGTGTGGGGTGTTTGCTTTGTTTT
TATGCTCGTGTCTTCTTAGATTTTTCCTCACAGATTTGTTCAAAGCATCA
GTTCTTCCACTTTTGTACGTACTTCCTCTGTTCGGAATTAAATGTGACAT
AAATTTGCAAGCTCTGTTCTCGCCCGGGAATGATCCATGTGATAAACCCT
CTGGACGAGGCTTAGTTCTCATATAGATCAGGAGGCACACACAGTTTGAA
ATGGCGGACTGTCATGACTGTGGAGGATCGATCACCAGTGGTACAAAGTC
AACCAAGTTGCGTTAGACAGGGTTCAAGAACCTCGTGAAAATGTCAAAGT
GGGTGTGTATTGGGATACCTAGGATGAAGGCCCCCCGCCGTTTGAGTGGC
TTGCTCATCCCGTCGGTCCCAATTGTTTGGCCCAGGAGTCTGGTCCAGAC
TCAAACACCCCAACGAAGAACATCTTGATGGCGTGATGCTTGGAGGTGAG
AGGGCACAAGACTCAGATGCCTTGGGGGGACTGCAGTGGTCATCATGGAG
GACTTCAGAATTTCCTGGAGCACGGTGTTCCGTCATCTGAAGGAGTATGA
CAGCCAGATTGCATGGGGTTAATGTATGGGCGTTGTATTATGTTGCAAGG
GGCATTGTGGCCACCATACAAGTATCCTCAACATTTAGGATGTCCCATCA
GTACACCGCACACCCTTCCGCAAATGGGCGGCCAATGTAGGGGCCTCCCT
TGCCCCGTTGTGGGATCTGTGCAAGCATGAGAAGGTGAACAAGGTCCAGC
GGTGGATTAAGTCAGTCTCCTCAAACCAACAGAAAGTCACCAGGGTGGGT
TTTGTCATCAGTCACATGCACAGGAGGGGGGAGTGGGGTATTGGTATTAG
TGGGCGATCTACATGGCGAGGTGCATGTGGACAAGAAGTGGTTTTGAGCC
AAAGTATCTTAGAGGGTAGGGCTGCATCCATTTGGGGTCCAAAATCCAAT
TTTGCGATTTTGATGCAATTTTGGCTGTCGCGTTTGTTAGGAAGTGTCAA
TATCCTTGTTCTGGACACACCTTTTCGTAACGTATATATTTTACCTACTC
CAAAACACTTTGGAGTAGGAAAACGTCATAAAAAAAAAAGGGAAGCCAAG
CCCCAAATGGACAAGCAGAGCAAAACTCGTACTCTAAGATACTTTTACTC
TTTACATCCTCAAAGATGGGCAAGGTGTACCTGCACCCTACCGAGGACCA
CCCCAAACCCCCATGTGCACAAAATAAGCATTACGTTACAAAGTTAATGT
TCCTTGCAGCTGTGACATGCCCTTGGAAGCTCTCCAACGGGGTGTGGTTT
GATGAGAAAATTAGGATCTGGTCACTTGTGGACACTAAGGTCACTCAACA
CTCCAGCAAACACCACCCCAAGGGCACCAAGGAGTTTGTGCCAGCCATGG
CGGACAGGGAGAAGTATAAGAAGCTTGTGATCGAGGATGTCATCCTGGCA
ATCGAGGCCTGCATGCCTAGCCCAGAAGGACACATCATCTCTGTGTAGCA
GAACAGGGCAAAGCCGCATAGAAAGGGGAGGATCATGGAGGCAATCAAGG
AGTCAATGGGGGACAACATTGTCATAGAGATCCAGCCAGCCAACTCACCT
GATCTCAACGCTAACGACCTAGGATTCTTTCATTCAATCCAACAACTGAA
GGAAGATGTGGGGATGACAAGCACAGAAGAGGCGGTGGAGGCCACAATGG
AGGCTTTTGATGTGTACCCCCTGGAGACGCTAGAGCCCGTCTGGCAGAGA
CTCTTCGCAGTCTACAGTGAAGTGCTGGGGTCCAAGGGTGATAATGTCTT
CAAAATTCCCTTCTTAGCAAGGAAAAAGCTAAGAAGGTGGGCAAGCTCCC
CTAAATACCCTGGTGGATGCGGCAAAATACTGTGCTGGAATGGAGTTTTG
GAGGTATCCGGGGGGGGGGATCATAGATAGGTGCAGGCTGCCCTATTTTG
ATTGAGATTTTGGTAAGCAACCTTTGAGTGTCTGCACAATACACCCATAA
AATATGAACATGTAAAAAAAACTTTAATTTATATTACTTTTAATTCCGAA
CGGATGAAGTATATATTTTCAGTCAAATTGTAATGCCCCTTAAGTAACAA
GAACATTTTTAGTAGGATTTAGTCCAGAGTAGGATGTGAAGGGTGGAAGG
ATTGGGCTCTGTTGTCAACTTTGGTGGTTATATATCCTTTTCTATGGATT
GTGTGTGGCTTTGCTTGGGTAGCACCAACTTTGAATCTGAAAAATATTTG
CCTGCAGCATGTAAAACTTTTTAGTAGGTGTAGATGACTCTGATATGTAC
AAAGGCCTTGCACACTTTGAGTGAATCAGCGTATTCAATATTGGGATAAG
GTTACATCTTAAAGGTTTTGGTCAACTGCCACTGAAAAGATTGTCACAAC
TAGCGGTTGCTGACACGAGGAAAATGTGGGGTGACCGGACAGTTAAGACG
GTGAAAAGGAAACCATTGGAATGAAAATATGCTGAGCCAAAATACTGCCA
ATGGTTTCTCTTATAGGCATACTGCCCTGCCAACCAGAATCGATTCAAAT
TCACACCGTACCAAGCATTAAACAAATTTATTCTGGAGGCATGCGTGGGA
TGTCATGTTTTTGTGTAATTTTTTCTTTGATGGATAATGAATGCTTTCGC
TATCACCTTCCTCGTGGCAACACCCGAAGAATGTAAGATGGCATATTAGA
TGCTAACTCCGGAGTACATTGTTAATATACTTTCAAGTACATGACTCTCA
ACTACTCACCGAACATTAGTATGAGGTACTAAATATGAGTGTTTCTTCTG
CATGGCATGGTGTTGTACTATACTCTGAAGCAGTTTGAAGTGCCGCTTTG
TCCAAAGATACATTGATAGAAGACAACTACTCCACCAACTACGCCCAACT
TGTGCCTGCACTCCTCTGGCCTAGATTCCCTTCTTTTCGTGGCAATACTT
GTATCTTGCGGTCAAACTTAGTCACCTCCTTCACGAGGTGCCCATGAGTT
GCTGCGCATTCATTACGTCCATGTCTTGTTGAGGTAAGTATCAGGAAGAG
GCTGGAGAGGCTTCTCTTCGCTTGGCACCTTTTGTCATCAAGATCATGAC
AAACTCTGGCACACATGGCTATGAACGGGGTATTTGTCCTGTTTGTAAGA
CCTTGCCTTCCTTACTGGTCTTCACTGTCACCTTCTATCTCCTGTACCTG
AGAACGTCAAACTCCTCACTACCTGGTGTGAATGACTCCTCCTCGAGTAG
ATACAGAATGAATTCTAAGTCTCCGGGCCTCTGAAAGGTTGACTTTTCCG
GGAGAGCCTTGCACATGCCGTGGCGATTGCTGAGATTTCTTTTTAAGCTG
TTTCAATCATATCTGATCCAATCAGGACAATGTCTCCCTAGTCAGACCTG
GAGATGTCCTCAGTCTATTGTCAGATTCACTGGCACCTGATTTGCCCACA
GAACCTCCTCTGTTTTTTTCATCCCAAGTGCATCAATGAGAAAATTCCTC
TGCTGCTCGAGCCTACAGCTCTACCCATCAATCAAGAGCCAACATTAGCG
CACGACCCTAGAATGCTTTTTTTGGTGCATGGGTCAAGAATGAGAGCCGC
CTGCTCCTCATTGGTCTTGACCATGCAAAGGTTTCTTGCTTTTCATATCC
TCCAGGTGAATCTTGGTAATATTTTGTGTAGTCTCCATGAATTTTTGGAC
CAGTGCATCTTTAAGAGCAGCATTCCCTTCGCTGCAAGAAGAAGCCTGGA
TCAGATGCAATTCCTCACTGAGATGTGATGACTTGAGTCATCAAGCAAAT
ATTATTACTCTGAAAACCATCATGCTCACCCTGAATATGAGTGGTGTCAT
CTGGGGCTGACCCGAGAAGACTATCTAGTTGATAGAGGATGACCTACGCC
TCGCTGCTAAGATATCTTTGGGTTGTTCCTAAGAGTATGTGTTTATTGCT
GATAGGAGGACAAGAGGTGACGGAAAACCGAAAATTTGATCCAAACCTGT
CAAATATTTATGTCTGCCTCTGTTCCACCGGGGCAAATAGTCATGTCCAT
ATCTCAACATTTGACAAAATCTGATACCTCGGCCTCTACCACCTCTGCCA
TAACTGCCAATGCTCATTGAAACTCAACGAACTATCTCAAATGTGTGAAC
TCTATAGCCTGGGGGTTGTTAGAGTGTTGGCAAGAGGGGCACCCATATAC
TGTAGAGTAATTTATTCATCTCGGAAATAAAAAAAAAATGGTATGCTTTG
CATAGTATTACATTGAAGTATACTGTAAATGCCATACACTGAATATATTG
TACTCCAGAGCACTTAAAAATCTACCTCAGTGTTGCTTAGCGGGGTGAAC
TGACTTATTTTGACCTGGTCAGAGGTTCTGCCAAAATGTTTCTAGCCAGG
CTGGCCATGGGAAAAAAAAATCTGACATGTTCAGTTCAGGGCCATTGACT
ATTTCAACGGTACCGGGACTTCCCTATGGTCTGGTGCGATTTTTTGCAAC
ATGGCCAGGCTACCCTGCAGCCTAATACAAATATGTAGTCACAGACCTGG
TCCAGGGTCATCAGATATTCCTATGATCTGGCCTGCAGTGCCTGCTCGGA
TCCCAACCATACTAGCTGCCCAGCCCAGTGGAATGCCCTGACATTTAGGG
ATTCGATATTTTTGAATGACCTGCCAAGATTATTGCACGCCCCCACCTCC
CCCTCACCATATGCATTCACTCCCATCTTTGTCCGGCTCCAGACGTTTAG
AGATGCCTTCCTTAATAACTTTCAAGCCATCCTACCTCTCTGATGCGCTG
ATGCGCTGTTCGTAGTATCAATTAGTGCTAACTCCCTTGTGCTTAGATTT
ATGATATTGGCAGCAGGTTCCACCCAAGGACCCCGCATCTCTGTCTCGTA
GACATTGTCCCCTCACAGCATCTAGATTGTGCTGAGCAGTCGCTGAAAAT
GTTGAAAACTCTATGCAGTTTGTCCGTAGGTTTTAGGTGATGGCATGGCA
GGACGCAGCTTTCAGCTGCTGAAGGCAGGAACACTCCTACCTACCATTTC
CCCCAGATTCAGTGAGACACGGCCAGACATATTTGGCCGTACAATTTTGT
ATTCAGTAGACTAAGCTGCAAATGAGCCTTGGAGCCTTCCATGACTGATT
GCTTGGCATAGTCCACACATGAAGTGAGAGACTGCGACCAGGAGAACAGG
GATGAACACCAACAGTATCCAAAACGGCAACTGCAATGCCCAGAGAATGT
CTTCTCTCTGTCCTGTACTGCATCATTATCAGTTTCCTCTGCTTAATCTT
GTTTATGGCAAGACGAGATCTGAGGGTTGGGACCGACTTCGTAATTGTAG
GAGGGCAAATGTAAAGTATACAGAACTCTTCCTGGCTTAACCCTTGTGTA
GCACTAGAGAGGTAGTGAGAAAGAAGTGAAGGACTTACTTGCATACCTCT
TTGAAAAGGAAAAGAACATAATGGGTACTACGTGAGGTGACTGACAATAC
GCGGCAACAAACCTTAACATTGTCGCATGTTCTATTTGGAACTGGTGTTG
TATTTAGGGTTAGGGTTAGGGTTATGGCAGGGTTTGCGTATAGGACTAAG
TATTTGTTGCTGTTCACCGCCAGACACCTGAGTAGGACTTGAACCCAATA
ACTTCAAAAAGATGCACCACAATAATTTTATATTCCATGACTGATTGCTT
GACATAATCTGAATGAAGTGGCAACTGCAACCAGGAGGGTAGGGATGAAC
ACCAACAGCATCCAAAACAACAAAGTGTGATATCCAGAGGATGCCTTCCC
TCTGTCCTATCTTGCATCCTTTCTTGTTCCCTTTGCCCCATCATGTTTCA
ACTTAAACGTACTGTGTCCCTGGAGAGTCTGATGGCACCCTTGGCTGCTC
TTTGATCTGGATTACTTCAGTTGTGCTCTCTTTAACCCTGTGGTGCTTTT
TTTGGGGGGGGGTAATGGCATTTGTAAGCAGGCGACCAAGGCAGCAGAGG
ACTTGAACATGCTTATGAGGCACCGTGATACAACCAGGAGAGAAAAAGAA
AAGGAAAAGGTAACATGTTTTTTTTCGGTGTTTGTATGAATTGGGACAGG
GGTCCATGAGGTGGGGTGGGGCAATTTGGAACGGATGTGGAATTAAGTTG
AGTCGGAATCATGTAGAGGAGAAAATAAGTGTTGGAAGGGCACTGAAGAG
ATATGCTATGCCCATGTTTGTGATCATCAGAAACTGTCTTCTGCAATTGA
TTGTGGGCTTATTTTGTGTAGTACTTACCCACACACCAAAATTTCCATGG
TGCAGGTTAAATTGGTGCGTGAGCATTGTGATGATCCCCACAGTGGGAGG
TCCTTACTTGGTTTAGGCAAGGTTATCTGTCCGCCTGACTATATCTGTGT
GCGTTCTTAGAATAGGGTTATTGTGTACTTTGTCATCTCTACCAGGCTGT
TCATGTATCTACCACTGCAAAGCGCTTACAAGTTGATGTTAAAAAGCTGT
GGCGTTCCATCCCCTTGCACCATTTGCAAATCATGGAACACTTATGCTAA
AAAAAATGTTTATCGTTGTCACTGTTGCAGTAGTGCCTCTAAAAACGAGG
TCTTGAGGTTTTTTGTGGGCATGACAATCTACCACACTTGCTAAAGTGAT
CAAATTTCCATAACAAGGCTGCTGGGGAGAGCTAGCAAGCACACCACTGT
GTTTTGGCGTACCTAGAAAATCACCTTCCGAGACTGATCATTGTGCCTAC
TCACGAATTTCATGCTCTGAATGGTGTCAACATGTTTGCTAAGGCTAAGC
TGGTGGCAGAGTTCCTCGCTGATCATGAAGGAAAGGTTGCAAACACCCAT
CCCAGTCGCCATGCAACCAGATACGGGGTCAATGATGACATTGGTGGCTA
TGAAGGTGAGGGTTCAGGTTTCTTTTACTGCCTGCATTGTAAGGTGGTAC
ATTAGTGAACATTCTCAAATTTCCTGCTACTGTCATAACAGACATGAGTG
GAGATATGTCTGGTGTAAGATGATTACGTTGATTCCTCTTTCACTGAGCT
TGGTAATTCATTCCAAAGGCCATGGCACTGCTGTTGGTGCTTTCTGCATT
CTCATATGGAGTTTACCTATTTTTGGCAGAGAAACAGAGCGTGTTTATAG
GAAGTGGAATGGCCACCAGCGACCAGTGTCGATTATTTTGCTGCAAGTTC
AAAGGCAAGAGCACATATGACGAGCCTCTACTCTGACAATCGCTTAACTC
CCAAATTGCTTGCCGTCACTACCTGCACCAATAATGATGTGGGACCATGT
CGTTTGTGAAGAAATGAAGGGGAACATGAAGTAAGATGCCAGATGCCAAG
GATAGCCCGACACTCGTTACATTTTGGAATGGGGCTAATTCTGTGGGGGG
GTGAGCTGGCATATGTGTGTGTGTGTGTGTGTGTGTCATTGTGTCATTGG
GTCATTGTGGGACCACCTTTCTTAGTTCTCAGGTACTCTCCCAAGTGAAT
TGCATTGTAGTGCACTACTGGGAGTATGGTCACTGATGGGTGTCCCTCAA
TGCCAACAGCCATAATATATGGGCCAGTTTTTGTGCCACAAAGTGTGGCT
GCTTATTACTCTCTACTGGTGCAAGACATGATTTTCACAACTCTAGGTTC
TTGCATATTTCATCCCCACCTGTTAATTTTGCCAACAACATTTTTGTATA
GATGTTTTGTGTGATATAGATGTTTGTGTGGCTATTCATTCAGAGGTGGC
AGTAACCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTTTCTCAGCAACATGTGTTCATCTTTGAGGTACACCAGGGTGGAGCT
ACATGGGTAAAATAATGTGGAAGTGAGAGGGGCAATACTTTTTGTAGAAT
CAGCTACTGCTGTGTGTGCTGTTTGGTGTACTGTGTCGTACCATTTGTTG
TTGAAGTTGTAATTTTGGTACAAGTACATTGTCCATTGTAACATGACAAC
ATTTCCTCTGCTACATAGGACGTAAGACCAAAACAGAGGACAGCAACAAC
AGTAGTACAATAATAGTAGGGGGTTTGCTTCTGCTGTTTGTAGATCTGGG
GGCAAGTCAATTTTGGCAAGGAAGTAACTGCACAGAGTGGTTCTAGTGGA
GTATTGTTGATTGTTGTTGCAAAGCCAAATGTAAGATTTTCTTAGTTGGT
TGCCCTTCCCAGCATTTGCAAGGTGCACGCAGAACTTAGCAAAACAGATT
AAAATTCCTTCCATATCGTCACCCCTTTTGTCATTACAAGGTTTGTTGGT
GGTGGAGCGGAGTGGAGCACCACTCCATGCTATCACCCCTCCTGATGTTT
GATTGGTGCTTTCATGGCATTGTAGGGCTGGTCATCATCTATTTCACATC
ACTCCTTTCATTTACAAGATCGTTTTTCGTGGCGTAGAGGAGCAAAGTGA
ATTGCCTTTACGCCATCCCTCCCTATATTTGTATTGAGCAAGATATTTGA
TAGTTTACTCTAGTGGGCTAGAGCATTGTTCATTCCTATCACCCCCCCTA
TCATTTGTAAGCTTCTTTAATGTGCATTGTGGTGGAGTACCATCTTACAT
TGTCCACTCTATCCATCAGCAGGATGATCAGCTGGGATTTAGAGTGACCC
back to topCoding sequence (CDS) from alignment at C-tenellus_contig763:88..14587- >mRNA_C-tenellus_contig763.1.3 ID=mRNA_C-tenellus_contig763.1.3|Name=mRNA_C-tenellus_contig763.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=897bp|location=Sequence derived from alignment at C-tenellus_contig763:88..14587- (Choristocarpus tenellus KU2346) ATGAGACTTGCAGCTCGGGTTGAGCGCCATTTACCTTGCAACCGGCCTAG TACGGTTCGAGAGTTCGGGGCGATGATGGACAAGGTAGTCGGCAATATTC TCGCTTCACCAACTGACCCCAAATTTCGCGAGCTTCGCGCTCTCAACAAG ACTGTACTGCGCAGCATAATAAACTGCCACGGTGGGAGGGAGATGCTCCA CCTACTAGGGTTCGAGAGGATCTCCAAGTATGGGGAACCTGTGTACTTTC TTTCTGACCCTCAGGTGGATCACCTCACAGAGGCAAGGGTCTGGCTAGCA CAGCGAGTGGAGGGGTGCTTGTCAATGGCAACGCAAAGATCTGCCCCCAC TGGGGGAGGAAATGACTCATGTGCTGATTGTGTCATCACGGTGAAGCTGA CAAGTGGGCGGGTCCTAGAGGGAGGGTTCTTTGCCCACGAGACGATCAAG AATGTCTACGAGTTCCTTCACGCCAGTGTTGTCAATAGCAGTGAGGACTT GAGACTTTGCCATGGATCACCACCGCAACAGCTGGGTGAAGACATGCTTG GTGTGACACTCAAAGAAACCAACTTCATGCCAACCGCTACTTTGGAAGTT GTGAAAACAAAGAGTTTGCAAGCATTGGGTAAGGCTGTGCCAGGAGCTGT GGATGAGGCGACCAAGGCAGCAGAGGACTTGAACATGCTTATGAGGCACC GTGATACAACCAGGAGAGAAAAAGAAAAGGAAAAGGCTAAGCTGGTGGCA GAGTTCCTCGCTGATCATGAAGGAAAGGTTGCAAACACCCATCCCAGTCG CCATGCAACCAGATACGGGGTCAATGATGACATTGGTGGCTATGAAGGTG AGGGTTCAGGTTTCTTTTACTGCCTGCATTGTAAGGTGGTACATTAG back to top
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