mRNA_C-tenellus_contig7618.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A2Z7B2V1_9LAMI (Cysteine-rich RLK (Receptor-like protein kinase) 8 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7B2V1_9LAMI) HSP 1 Score: 120 bits (302), Expect = 1.320e-31 Identity = 54/136 (39.71%), Postives = 87/136 (63.97%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG-------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVARGFTQ G+D+ E F+PV +T+R ++S+AA W + LD A+LN +L+E+++++ P G + + K++YGLKQS W+ + K++ +G+T+ Q D ++ K SE GR+A+L Y+DD Sbjct: 30 KARLVARGFTQTYGIDYQETFAPVAKLNTVRILLSIAANLEWPLHQLDVKNAFLNGELEEEVYMDAPPGFEDQFRGKVCRLRKSLYGLKQSPRAWFEKFSKLVKHQGYTQGQSDHTMFVKWSETGRVAVLIVYVDD 165
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438JR38_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JR38_VITVI) HSP 1 Score: 124 bits (312), Expect = 3.080e-31 Identity = 57/137 (41.61%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVARGFTQ+ G+D+ E F+PV +T+R ++S+A + W + LD A+LN DL+E++++E+P G + K +K++YGLKQS W+ K++L G+ + Q D L+ KKS G++AIL Y+DD Sbjct: 44 KARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKVVLKLGYKQGQADHTLFVKKSHAGKLAILIVYVDD 180
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438EN06_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EN06_VITVI) HSP 1 Score: 124 bits (310), Expect = 1.050e-30 Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVARGFTQ+ G+D+ E F+PV +T+R ++S+A + W + LD A+LN DL+E++++E+P G + K +K++YGLKQS W+ K +L G+ + Q D L+ KKS G++AIL Y+DD Sbjct: 354 KARLVARGFTQSYGIDYHETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKLAILIVYVDD 490
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438JJN6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JJN6_VITVI) HSP 1 Score: 117 bits (294), Expect = 1.540e-30 Identity = 54/137 (39.42%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVA+GFTQ +D+ E F+PV +T+R ++S+ A W + D A+LN +L+E++++ LP G R K +K++YGLKQS W+ K+I +G+ + Q D ++FK+S DGR+ IL Y+DD Sbjct: 30 KARLVAKGFTQTYDIDYTETFAPVAKLNTIRVLLSLTANLDWPLHQFDIKNAFLNGELEEEVFMMLPPGFCKEEEETRVCKLKKSLYGLKQSPRAWFDRFAKVIKNQGYQQGQSDHTMFFKQSNDGRMTILIVYVDD 166
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A803QI12_CANSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QI12_CANSA) HSP 1 Score: 123 bits (309), Expect = 2.870e-30 Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVA+GFTQ G+D+ E F+PV +T+R ++S+AA K W + LD A+LN DL+E++++++P G + K +K++YGLKQS W+ K I+ G+T+ Q D L+ K S D RIAIL Y+DD Sbjct: 264 KARLVAKGFTQTYGIDYQETFAPVAKLNTVRVLLSLAANKDWPLHQLDVKNAFLNGDLEEEVYMDIPPGFENSSNQNKVCKLKKSLYGLKQSPRAWFGRFTKAIIQNGYTQCQADHTLFVKFSSDKRIAILIVYVDD 400
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438DKE2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DKE2_VITVI) HSP 1 Score: 122 bits (307), Expect = 3.150e-30 Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVARGFTQ+ G+D+ E F+PV +T+R ++S+A + W + LD A+LN DL+E++++E+P G + K +K++YGLKQS W+ K +L G+ + Q D L+ KKS G++AIL Y+DD Sbjct: 93 KARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKMAILIVYVDD 229
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438CTV7_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CTV7_VITVI) HSP 1 Score: 122 bits (307), Expect = 3.400e-30 Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVARGFTQ+ G+D+ E F+PV +T+R ++S+A + W + LD A+LN DL+E++++E+P G + K +K++YGLKQS W+ K +L G+ + Q D L+ KKS G++AIL Y+DD Sbjct: 93 KARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEGSMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQTDHTLFVKKSHAGKMAILIVYVDD 229
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438CJB8_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CJB8_VITVI) HSP 1 Score: 123 bits (308), Expect = 3.540e-30 Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVARGFTQ+ G+D+ E F+PV +T+R ++S+A + W + LD A+LN DL+E++++E+P G + K +K++YGLKQS W+ K +L G+ + Q D L+ KKS G++AIL Y+DD Sbjct: 227 KARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKLAILIVYVDD 363
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A2Z7B226_9LAMI (Cysteine-rich RLK (Receptor-like protein kinase) 8 n=2 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7B226_9LAMI) HSP 1 Score: 116 bits (290), Expect = 3.560e-30 Identity = 53/136 (38.97%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG-------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K RLVARGFTQ G+D+ E F+PV +T+R ++S+AA W + LD A+LN +L+E+++++ P G + + K++YGLKQS W+ + K + +G+T+ Q D ++ K SE R+A+L Y+DD Sbjct: 30 KARLVARGFTQTYGIDYQETFAPVAKLNTVRILLSIAANLEWPLHQLDVKNAFLNGELEEEVYMDAPPGFEDQCRGKVCRLRKSLYGLKQSPRAWFEKFSKSVKHQGYTQGQSDHTMFVKWSETERVAVLIVYVDD 165
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438EK50_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EK50_VITVI) HSP 1 Score: 123 bits (309), Expect = 4.020e-30 Identity = 57/137 (41.61%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 387 K+RLVARGFTQ+ G+D+ E F+PV +T+R ++S+A + W + LD A+LN DL+E++++E+P G + K +K++YGLKQS W+ K +L G+ + Q D L+ KKS G++AIL Y+DD Sbjct: 373 KSRLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKLAILIVYVDD 509 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7618.1.1 >prot_C-tenellus_contig7618.1.1 ID=prot_C-tenellus_contig7618.1.1|Name=mRNA_C-tenellus_contig7618.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=132bp KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTback to top mRNA from alignment at C-tenellus_contig7618:1705..2100+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7618.1.1 ID=mRNA_C-tenellus_contig7618.1.1|Name=mRNA_C-tenellus_contig7618.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=396bp|location=Sequence derived from alignment at C-tenellus_contig7618:1705..2100+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7618:1705..2100+ >mRNA_C-tenellus_contig7618.1.1 ID=mRNA_C-tenellus_contig7618.1.1|Name=mRNA_C-tenellus_contig7618.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=396bp|location=Sequence derived from alignment at C-tenellus_contig7618:1705..2100+ (Choristocarpus tenellus KU2346)back to top |