prot_C-tenellus_contig7618.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7618.1.1
Unique Nameprot_C-tenellus_contig7618.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length132
Homology
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A2Z7B2V1_9LAMI (Cysteine-rich RLK (Receptor-like protein kinase) 8 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7B2V1_9LAMI)

HSP 1 Score: 120 bits (302), Expect = 1.320e-31
Identity = 54/136 (39.71%), Postives = 87/136 (63.97%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG-------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVARGFTQ  G+D+ E F+PV   +T+R ++S+AA   W +  LD   A+LN +L+E+++++ P G       +  +  K++YGLKQS   W+ +  K++  +G+T+ Q D  ++ K SE GR+A+L  Y+DD
Sbjct:   30 KARLVARGFTQTYGIDYQETFAPVAKLNTVRILLSIAANLEWPLHQLDVKNAFLNGELEEEVYMDAPPGFEDQFRGKVCRLRKSLYGLKQSPRAWFEKFSKLVKHQGYTQGQSDHTMFVKWSETGRVAVLIVYVDD 165          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438JR38_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JR38_VITVI)

HSP 1 Score: 124 bits (312), Expect = 3.080e-31
Identity = 57/137 (41.61%), Postives = 88/137 (64.23%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVARGFTQ+ G+D+ E F+PV   +T+R ++S+A  + W +  LD   A+LN DL+E++++E+P G        +  K +K++YGLKQS   W+    K++L  G+ + Q D  L+ KKS  G++AIL  Y+DD
Sbjct:   44 KARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKVVLKLGYKQGQADHTLFVKKSHAGKLAILIVYVDD 180          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438EN06_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EN06_VITVI)

HSP 1 Score: 124 bits (310), Expect = 1.050e-30
Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVARGFTQ+ G+D+ E F+PV   +T+R ++S+A  + W +  LD   A+LN DL+E++++E+P G        +  K +K++YGLKQS   W+    K +L  G+ + Q D  L+ KKS  G++AIL  Y+DD
Sbjct:  354 KARLVARGFTQSYGIDYHETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKLAILIVYVDD 490          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438JJN6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JJN6_VITVI)

HSP 1 Score: 117 bits (294), Expect = 1.540e-30
Identity = 54/137 (39.42%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVA+GFTQ   +D+ E F+PV   +T+R ++S+ A   W +   D   A+LN +L+E++++ LP G        R  K +K++YGLKQS   W+    K+I  +G+ + Q D  ++FK+S DGR+ IL  Y+DD
Sbjct:   30 KARLVAKGFTQTYDIDYTETFAPVAKLNTIRVLLSLTANLDWPLHQFDIKNAFLNGELEEEVFMMLPPGFCKEEEETRVCKLKKSLYGLKQSPRAWFDRFAKVIKNQGYQQGQSDHTMFFKQSNDGRMTILIVYVDD 166          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A803QI12_CANSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QI12_CANSA)

HSP 1 Score: 123 bits (309), Expect = 2.870e-30
Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVA+GFTQ  G+D+ E F+PV   +T+R ++S+AA K W +  LD   A+LN DL+E++++++P G        +  K +K++YGLKQS   W+    K I+  G+T+ Q D  L+ K S D RIAIL  Y+DD
Sbjct:  264 KARLVAKGFTQTYGIDYQETFAPVAKLNTVRVLLSLAANKDWPLHQLDVKNAFLNGDLEEEVYMDIPPGFENSSNQNKVCKLKKSLYGLKQSPRAWFGRFTKAIIQNGYTQCQADHTLFVKFSSDKRIAILIVYVDD 400          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438DKE2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DKE2_VITVI)

HSP 1 Score: 122 bits (307), Expect = 3.150e-30
Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVARGFTQ+ G+D+ E F+PV   +T+R ++S+A  + W +  LD   A+LN DL+E++++E+P G        +  K +K++YGLKQS   W+    K +L  G+ + Q D  L+ KKS  G++AIL  Y+DD
Sbjct:   93 KARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKMAILIVYVDD 229          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438CTV7_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CTV7_VITVI)

HSP 1 Score: 122 bits (307), Expect = 3.400e-30
Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVARGFTQ+ G+D+ E F+PV   +T+R ++S+A  + W +  LD   A+LN DL+E++++E+P G        +  K +K++YGLKQS   W+    K +L  G+ + Q D  L+ KKS  G++AIL  Y+DD
Sbjct:   93 KARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEGSMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQTDHTLFVKKSHAGKMAILIVYVDD 229          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438CJB8_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CJB8_VITVI)

HSP 1 Score: 123 bits (308), Expect = 3.540e-30
Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVARGFTQ+ G+D+ E F+PV   +T+R ++S+A  + W +  LD   A+LN DL+E++++E+P G        +  K +K++YGLKQS   W+    K +L  G+ + Q D  L+ KKS  G++AIL  Y+DD
Sbjct:  227 KARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKLAILIVYVDD 363          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A2Z7B226_9LAMI (Cysteine-rich RLK (Receptor-like protein kinase) 8 n=2 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7B226_9LAMI)

HSP 1 Score: 116 bits (290), Expect = 3.560e-30
Identity = 53/136 (38.97%), Postives = 85/136 (62.50%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG-------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K RLVARGFTQ  G+D+ E F+PV   +T+R ++S+AA   W +  LD   A+LN +L+E+++++ P G       +  +  K++YGLKQS   W+ +  K +  +G+T+ Q D  ++ K SE  R+A+L  Y+DD
Sbjct:   30 KARLVARGFTQTYGIDYQETFAPVAKLNTVRILLSIAANLEWPLHQLDVKNAFLNGELEEEVYMDAPPGFEDQCRGKVCRLRKSLYGLKQSPRAWFEKFSKSVKHQGYTQGQSDHTMFVKWSETERVAVLIVYVDD 165          
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Match: A0A438EK50_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EK50_VITVI)

HSP 1 Score: 123 bits (309), Expect = 4.020e-30
Identity = 57/137 (41.61%), Postives = 88/137 (64.23%), Query Frame = 0
Query:    1 KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFTQAYLNADLQEDIWLELPDG--------RTVKAEKAIYGLKQSAMEWYHELRKIILAEGWTRSQHDECLYFKKSEDGRIAILTTYMDD 129
            K+RLVARGFTQ+ G+D+ E F+PV   +T+R ++S+A  + W +  LD   A+LN DL+E++++E+P G        +  K +K++YGLKQS   W+    K +L  G+ + Q D  L+ KKS  G++AIL  Y+DD
Sbjct:  373 KSRLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKLAILIVYVDD 509          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7618.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2Z7B2V1_9LAMI1.320e-3139.71Cysteine-rich RLK (Receptor-like protein kinase) 8... [more]
A0A438JR38_VITVI3.080e-3141.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A438EN06_VITVI1.050e-3041.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A438JJN6_VITVI1.540e-3039.42Retrovirus-related Pol polyprotein from transposon... [more]
A0A803QI12_CANSA2.870e-3043.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438DKE2_VITVI3.150e-3041.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CTV7_VITVI3.400e-3041.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CJB8_VITVI3.540e-3041.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z7B226_9LAMI3.560e-3038.97Cysteine-rich RLK (Receptor-like protein kinase) 8... [more]
A0A438EK50_VITVI4.020e-3041.61Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..129
e-value: 6.4E-28
score: 98.0
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7618contigC-tenellus_contig7618:1705..2100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7618.1.1mRNA_C-tenellus_contig7618.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7618 1705..2100 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7618.1.1 ID=prot_C-tenellus_contig7618.1.1|Name=mRNA_C-tenellus_contig7618.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=132bp
KTRLVARGFTQNAGVDFFEPFSPVVGYDTLRYVISVAAYKGWSIDDLDFT
QAYLNADLQEDIWLELPDGRTVKAEKAIYGLKQSAMEWYHELRKIILAEG
WTRSQHDECLYFKKSEDGRIAILTTYMDDTAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2