mRNA_C-tenellus_contig7599.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: A0A225VYH6_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VYH6_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.830e-10 Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 148 ALETSLQVAQRSEMPLGAWGRLKQVIATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPLPKS 462 A+E L+ A P +L+ ++ +++R+ G DPPAKV+P+++ LKEG +K++PR P ++M EF + LV LG + P W++P LP+ K+ Sbjct: 354 AIEKMLRAALEQGFPRRLESKLRAIVFKH-DVWRLTLGDDPPAKVDPLEIRLKEGAKSIKSKPRQYPPAVRTFMREFNSKLVELGWVYENPTSRWASPVLPVRKA 457
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: A0A225V0I6_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V0I6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.690e-10 Identity = 28/79 (35.44%), Postives = 46/79 (58.23%), Query Frame = 1 Query: 223 IATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPLPK 459 + T+ +++R+ G DPP+K+EP ++ KEGT P++ +PR P WM F LV LG + W++P+ P+ K Sbjct: 426 VVTRYDIWRLSIGNDPPSKIEPFEIRFKEGTVPIRCKPRTYAPAERDWMKGFNESLVALGWVYRNEASRWASPARPVKK 504
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: A0A6A4DRK1_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4DRK1_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.110e-10 Identity = 35/100 (35.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 151 LETSLQVAQRSEMPLGAWGRLKQVIATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLP 450 LE ++VA++ + L +L+ ++ + + FRV FG DPP +VEP+QV LK G +PV+A+PR P +++ A L+ G++ + W PS P Sbjct: 112 LEKKVEVAEKMGLTLDGRAKLRAILRVRVDCFRVEFGNDPPVRVEPMQVRLKAGASPVRAQPRRYSPNDRAFLDRHTAALLEHGLVFKNHRSRW--PSAP 209
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: A0A6G0K580_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0K580_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.030e-9 Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = 1 Query: 91 EQDPELMMDPAEEEKNRGLALETSLQVAQRSEMPLGAWGRLKQVIATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPL 453 E + + DP +++KN E + A + P L +V+ + +++R+ G DPP+K+EP + KEGT P++ RPR P WM F LV LG + W++P+ P+ Sbjct: 49 ESETPMSFDPPDKKKNIAQLCEL-INEAVANGFPAERKRELFEVVM-RYDIWRIAIGNDPPSKIEPFVIQFKEGTLPIRCRPRTYAPAEREWMKAFNESLVKLGWVYRNEASRWASPARPV 167
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: A0A6G0LLF4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0LLF4_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.780e-9 Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 223 IATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPLPK 459 + + +++R+ G DPP+K+EP + KEGT P++ RPR P WM EF L LG + W++P+ P+ K Sbjct: 506 VVMRYDIWRIAIGNDPPSKIEPFIIQFKEGTLPIRCRPRTYAPAEREWMKEFNESLAKLGWVYRNEASRWASPARPVKK 584
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: A0A6G0QPC9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QPC9_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.900e-9 Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = 1 Query: 91 EQDPELMMDPAEEEKNRGLALETSLQVAQRSEMPLGAWGRLKQVIATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPL 453 E + + DP +++KN E + A + P L +V+ + +++R+ G DPP+K+EP + KEGT P++ RPR P WM F LV LG + W++P+ P+ Sbjct: 49 ESETPMSFDPPDKKKNIAQLCEL-INEAVANGFPAERKRELFEVVM-RYDIWRIAIGNDPPSKIEPFVIQFKEGTLPIRCRPRTYAPAEREWMKAFNESLVKLGWVYRNEASRWASPARPV 167
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: A0A6A4B5P5_9STRA (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4B5P5_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.130e-9 Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 223 IATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPLPK 459 + + +++R+ G DPP+K+EP + KEGT P++ RPR P WM F LV LG + W++P+ P+ K Sbjct: 71 VVMRYDIWRIAIGNDPPSKIEPFVIQFKEGTLPIRCRPRTYAPAEREWMKAFNESLVKLGWVYRNEASRWASPARPVKK 149
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: A0A6A3X044_9STRA (RT_RNaseH domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3X044_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.090e-9 Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = 1 Query: 91 EQDPELMMDPAEEEKNRGLALETSLQVAQRSEMPLGAWGRLKQVIATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPL 453 E + + DP +++KN E + A + P L +V+ + +++R+ G DPP+K+EP + KEGT P++ RPR P WM F LV LG + W++P+ P+ Sbjct: 167 ESETPMSFDPPDKKKNIAQLCEL-INEAVANGFPAERKRELFEVVM-RYDIWRIAIGNDPPSKIEPFVIQFKEGTLPIRCRPRTYAPAEREWMKAFNESLVKLGWVYRNEASRWASPARPV 285
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: H3GMM3_PHYRM (RNA-directed DNA polymerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMM3_PHYRM) HSP 1 Score: 64.7 bits (156), Expect = 3.380e-9 Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 148 ALETSLQVAQRSEMPLGAWGRLKQVIATQTNLFRVFFGRDPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPLPKS 462 A+ET +Q A P +L+ ++ +++R+ DPPA+V P++V LKEG P K +PR P ++ +F LV LG++ P W++P LP+ KS Sbjct: 563 AVETLIQRALEHGFPPDKVDKLRLIVHAY-DVWRLVLRDDPPARVPPLEVRLKEGAQPTKCKPRKYPPHIRQFLRDFNEQLVALGLVYENPTSRWASPVLPVKKS 666
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Match: G4ZJM0_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJM0_PHYSP) HSP 1 Score: 60.5 bits (145), Expect = 7.450e-9 Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 1 Query: 265 DPPAKVEPIQVVLKEGTTPVKARPRASHPKRHSWMAEFVALLVVLGMLRWTPQDVWSNPSLPLPK 459 DPP+K+EP ++ K+GT P++ RPR P WM +F LV LG + W++P+ P+ K Sbjct: 1 DPPSKIEPFEIRFKDGTVPIRCRPRTYAPAEREWMKQFNESLVALGWVYRNEASRWASPARPVKK 65 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7599.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7599.1.1 >prot_C-tenellus_contig7599.1.1 ID=prot_C-tenellus_contig7599.1.1|Name=mRNA_C-tenellus_contig7599.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=148bp MEVMQESIGTAHLDRVDDSVSTLLEQDPELMMDPAEEEKNRGLALETSLQback to top mRNA from alignment at C-tenellus_contig7599:2673..3134- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7599.1.1 ID=mRNA_C-tenellus_contig7599.1.1|Name=mRNA_C-tenellus_contig7599.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=462bp|location=Sequence derived from alignment at C-tenellus_contig7599:2673..3134- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7599:2673..3134- >mRNA_C-tenellus_contig7599.1.1 ID=mRNA_C-tenellus_contig7599.1.1|Name=mRNA_C-tenellus_contig7599.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=444bp|location=Sequence derived from alignment at C-tenellus_contig7599:2673..3134- (Choristocarpus tenellus KU2346)back to top |