mRNA_C-tenellus_contig7503.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A6H5JPJ5_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPJ5_9PHAE) HSP 1 Score: 377 bits (968), Expect = 8.530e-117 Identity = 193/289 (66.78%), Postives = 214/289 (74.05%), Query Frame = 1 Query: 454 RRSRRAAALKAHETGKRIAEMILECDEEGXXXXXXXXXXGSTNAGRRKSDGSKENDESRAAEVAGAVA--------LERRKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGGTKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFARTDLRPDSPEFEGMGFKDMTDVALAAVRGLVVVNNPNEPATRRGRPPR 1296 RR +RAAA KA + KR+AEMILEC+E G XXXX L RRKPIKTRWS ED +LK V+ +G+ NW VA+ + GKTDMQCFHRWTKVFNGGTKGPWS EDD RVAELVG++GAKKWS IAAQLPGRTGKQCRERWHNHLNPHI+K PWS ED TIL+QH+ LGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKA+IVFARTDL P SPEFEG GFK++ D+ALAAVRG + V+NPNEPATRRGRPPR Sbjct: 35 RRIQRAAAAKAVDRSKRVAEMILECNEGGEIGNDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLYRRKPIKTRWSAAEDAQLKKLVDSNGSGNWRVVADSIPGKTDMQCFHRWTKVFNGGTKGPWSPEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFARTDLTPSSPEFEGHGFKNVIDIALAAVRGRITVSNPNEPATRRGRPPR 323
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A1E7FEX6_9STRA (Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEX6_9STRA) HSP 1 Score: 213 bits (543), Expect = 5.880e-63 Identity = 95/153 (62.09%), Postives = 116/153 (75.82%), Query Frame = 1 Query: 685 RWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAD 1140 +W+ ED LK+AVE+HG NW ++ + G++++QC HRW KV KGPW+AE+DR+V ELV + GAKKWS IA LPGR GKQCRERWHNHLNP I+K W EDRTIL H LGN+WAEIAK++PGRTDNAIKNHWNSSM+RK + Sbjct: 26 KWTKHEDETLKEAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLVKGPWTAEEDRKVVELVKKHGAKKWSLIATNLPGRIGKQCRERWHNHLNPDISKEAWKEDEDRTILESHITLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIE 178
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A7S2WMH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMH6_9STRA) HSP 1 Score: 211 bits (537), Expect = 7.620e-62 Identity = 101/164 (61.59%), Postives = 117/164 (71.34%), Query Frame = 1 Query: 664 RRKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFA 1152 +RK RW+T ED KLK AV ++G NW K+AE +T++QC HRW KV N KGPW+AE+D +V ELV G KKW+ IA LPGR GKQCRERWHNHLNP I+K WS EDR IL H LGN+WAEIAK +PGRTDNAIKNHWNSSMKRK + A Sbjct: 28 KRKSCNRRWTTEEDEKLKIAVARNGAKNWKKIAEAFPDRTEVQCLHRWQKVLNPELVKGPWTAEEDAKVIELVKLHGPKKWTMIADCLPGRIGKQCRERWHNHLNPKISKLAWSEDEDRVILEAHEKLGNRWAEIAKRLPGRTDNAIKNHWNSSMKRKIEKFLA 191
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A7S0CT81_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CT81_MICPS) HSP 1 Score: 213 bits (541), Expect = 2.610e-61 Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 1 Query: 640 VAGAVALERRKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFAR 1155 V G + R+ K W+ ED L+ AV ++ NW K+AE +TD+QC HRW KV N KGPW+ E+D ++ ELVG++GAK+WS+IA QLPGR GKQCRERW+NHLNP I + WS EDR +++ HR GNKWAEIAK GRTDNAIKNHWNS++KRK D AR Sbjct: 11 VTGRIGGPTRRSAKGGWTPAEDDILRRAVAQYKGKNWKKIAEYFEERTDVQCLHRWQKVLNPELVKGPWTKEEDAKIIELVGQLGAKQWSKIAQQLPGRIGKQCRERWYNHLNPDIKREEWSREEDRALIIAHRAFGNKWAEIAKTFVGRTDNAIKNHWNSTLKRKVDEALAR 183
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A9UVK9_MONBE (Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVK9_MONBE) HSP 1 Score: 207 bits (527), Expect = 2.270e-60 Identity = 91/151 (60.26%), Postives = 113/151 (74.83%), Query Frame = 1 Query: 685 RWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRK 1134 RW+ ED +L +AVE+H NW KVAEE G+TD+QC HRW KV N KGPW+ E+D V +LV + G K+WS IA L GR GKQCRERWHNHL+P I K PW+A E+R I+ H LGNKWAEIAK++PGRTDN++KNHWNS+M+R+ Sbjct: 44 RWTKAEDQRLVEAVERHQGKNWKKVAEEFEGRTDVQCLHRWQKVLNPDLVKGPWTKEEDDLVIQLVDKYGPKRWSLIAGHLKGRIGKQCRERWHNHLHPDIKKTPWTAEEERVIMNAHLRLGNKWAEIAKLLPGRTDNSVKNHWNSTMRRR 194
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: C1EGX6_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGX6_MICCC) HSP 1 Score: 205 bits (522), Expect = 6.060e-60 Identity = 92/164 (56.10%), Postives = 116/164 (70.73%), Query Frame = 1 Query: 667 RKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFAR 1155 R+ K W+ ED L+ AV ++ NW K+AE +TD+QC HRW KV N KGPW+ E+D ++ ELVG++GAK+WS+IA QLPGR GKQCRERW+NHLNP I + WS EDR +++ H GN+WAEIAK GRTDNAIKNHWNS++KRK D AR Sbjct: 7 RRSAKGGWTPDEDDILRRAVAQYKGKNWKKIAEYFEERTDVQCLHRWQKVLNPELVKGPWTKEEDDKIIELVGQLGAKQWSKIAQQLPGRIGKQCRERWYNHLNPEIKREEWSREEDRKLIIAHHQFGNRWAEIAKTFVGRTDNAIKNHWNSTLKRKVDEALAR 170
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A7S0XPS0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XPS0_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.700e-59 Identity = 109/193 (56.48%), Postives = 135/193 (69.95%), Query Frame = 1 Query: 685 RWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFAR---TDLR----PDSPEFEGMGFKDMTDVALAAVRG 1239 +W+ ED L+DAVE+HG NW ++ + G++++QC HRW KV KGPW+AE+DR+V ELV + GAKKWSQIA +LPGR GKQCRERWHNHLNP I+K W EDRTIL H LGN+WAEIAK++PGRTDNAIKNHWNSSM+RK + +R D R + F+ MG D+ D L AVRG Sbjct: 181 KWTKQEDDTLRDAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLVKGPWTAEEDRKVVELVKKYGAKKWSQIAQELPGRIGKQCRERWHNHLNPEISKEAWKEDEDRTILESHVTLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIEKYLSRKQGVDERNIRYTEDGRFDFMG--DL-DGVLNAVRG 370
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: B8CFV0_THAPS (MYB DNA binding protein/ transcription factor-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFV0_THAPS) HSP 1 Score: 201 bits (512), Expect = 1.140e-58 Identity = 90/152 (59.21%), Postives = 113/152 (74.34%), Query Frame = 1 Query: 688 WSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAD 1140 WS ED L++AVE++G NW +A+ + +T++QC HRW KV KGPW+ E+D V LV + GAKKWS IA+ LPGR GKQCRERWHNHLNP I++ WS EDRTIL H +GN+WAEI+K++PGRTDNAIKNHWNSSMK+K + Sbjct: 1 WSAEEDEALRNAVERNGPKNWKLIAKHLPQRTEVQCLHRWQKVLKPSLVKGPWTPEEDHLVLRLVQKYGAKKWSLIASHLPGRIGKQCRERWHNHLNPGISRGAWSFEEDRTILQFHENVGNRWAEISKLLPGRTDNAIKNHWNSSMKKKIE 152
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A0S7GPH4_9TELE (MYB (Fragment) n=4 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7GPH4_9TELE) HSP 1 Score: 206 bits (525), Expect = 2.530e-58 Identity = 93/155 (60.00%), Postives = 113/155 (72.90%), Query Frame = 1 Query: 679 KTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGGT-KGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAD 1140 KTRW+ ED KLK VE HG+ +W +A + +TD+QC HRW KV N KGPW+ E+D+RV ELV + GAK+WS IA L GR GKQCRERWHNHLNP + K W+ EDR I H LGN+WAEIAK++PGRTDNAIKNHWNS+M+RK + Sbjct: 40 KTRWTREEDEKLKKLVELHGSEDWKLIASLLANRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A7S4EER2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EER2_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.170e-58 Identity = 108/193 (55.96%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 685 RWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGGT-KGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFAR------TDLR-PDSPEFEGMGFKDMTDVALAAVRG 1239 +W+ ED LKDAVE+HG NW ++ + G++++QC HRW KV KGPW+AE+DR+V ELV + GAKKWS IA LPGR GKQCRERWHNHLNP I+K W EDR IL H LGN+WAEIAK++PGRTDNAIKNHWNSSM+RK + A+ T++R + F+ MG D+ V L AVRG Sbjct: 179 KWTKQEDETLKDAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLIKGPWTAEEDRKVVELVKKHGAKKWSLIAQSLPGRIGKQCRERWHNHLNPEISKEAWKEKEDRVILESHIALGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIEKYLAKKQGVDETNIRYTEDGRFDFMG--DLEGV-LNAVRG 368 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7503.1.1 >prot_C-tenellus_contig7503.1.1 ID=prot_C-tenellus_contig7503.1.1|Name=mRNA_C-tenellus_contig7503.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=446bp MELDSHVDVGHKQCEDDVLVNAEYSGASDDDADDCSGQGERRSRRAAALKback to top mRNA from alignment at C-tenellus_contig7503:12..3290- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7503.1.1 ID=mRNA_C-tenellus_contig7503.1.1|Name=mRNA_C-tenellus_contig7503.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3279bp|location=Sequence derived from alignment at C-tenellus_contig7503:12..3290- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7503:12..3290- >mRNA_C-tenellus_contig7503.1.1 ID=mRNA_C-tenellus_contig7503.1.1|Name=mRNA_C-tenellus_contig7503.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1338bp|location=Sequence derived from alignment at C-tenellus_contig7503:12..3290- (Choristocarpus tenellus KU2346)back to top |