prot_C-tenellus_contig7503.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7503.1.1
Unique Nameprot_C-tenellus_contig7503.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length446
Homology
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A6H5JPJ5_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPJ5_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 2.130e-118
Identity = 193/289 (66.78%), Postives = 214/289 (74.05%), Query Frame = 0
Query:   41 RRSRRAAALKAHETGKRIAEMILECDEEGXXXXXXXXXXGSTNAGRRKSDGSKENDESRAAEVAGAVA--------LERRKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGGTKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFARTDLRPDSPEFEGMGFKDMTDVALAAVRGLVVVNNPNEPATRRGRPPR 321
            RR +RAAA KA +  KR+AEMILEC+E G      XXXX                                     L RRKPIKTRWS  ED +LK  V+ +G+ NW  VA+ + GKTDMQCFHRWTKVFNGGTKGPWS EDD RVAELVG++GAKKWS IAAQLPGRTGKQCRERWHNHLNPHI+K PWS  ED TIL+QH+ LGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKA+IVFARTDL P SPEFEG GFK++ D+ALAAVRG + V+NPNEPATRRGRPPR
Sbjct:   35 RRIQRAAAAKAVDRSKRVAEMILECNEGGEIGNDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLYRRKPIKTRWSAAEDAQLKKLVDSNGSGNWRVVADSIPGKTDMQCFHRWTKVFNGGTKGPWSPEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFARTDLTPSSPEFEGHGFKNVIDIALAAVRGRITVSNPNEPATRRGRPPR 323          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A1E7FEX6_9STRA (Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEX6_9STRA)

HSP 1 Score: 213 bits (543), Expect = 3.890e-64
Identity = 95/153 (62.09%), Postives = 116/153 (75.82%), Query Frame = 0
Query:  118 RWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAD 269
            +W+  ED  LK+AVE+HG  NW  ++  + G++++QC HRW KV      KGPW+AE+DR+V ELV + GAKKWS IA  LPGR GKQCRERWHNHLNP I+K  W   EDRTIL  H  LGN+WAEIAK++PGRTDNAIKNHWNSSM+RK +
Sbjct:   26 KWTKHEDETLKEAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLVKGPWTAEEDRKVVELVKKHGAKKWSLIATNLPGRIGKQCRERWHNHLNPDISKEAWKEDEDRTILESHITLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIE 178          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A7S2WMH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMH6_9STRA)

HSP 1 Score: 211 bits (537), Expect = 5.170e-63
Identity = 101/164 (61.59%), Postives = 117/164 (71.34%), Query Frame = 0
Query:  111 RRKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFA 273
            +RK    RW+T ED KLK AV ++G  NW K+AE    +T++QC HRW KV N    KGPW+AE+D +V ELV   G KKW+ IA  LPGR GKQCRERWHNHLNP I+K  WS  EDR IL  H  LGN+WAEIAK +PGRTDNAIKNHWNSSMKRK +   A
Sbjct:   28 KRKSCNRRWTTEEDEKLKIAVARNGAKNWKKIAEAFPDRTEVQCLHRWQKVLNPELVKGPWTAEEDAKVIELVKLHGPKKWTMIADCLPGRIGKQCRERWHNHLNPKISKLAWSEDEDRVILEAHEKLGNRWAEIAKRLPGRTDNAIKNHWNSSMKRKIEKFLA 191          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A7S0CT81_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CT81_MICPS)

HSP 1 Score: 213 bits (541), Expect = 1.740e-62
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 0
Query:  103 VAGAVALERRKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFAR 274
            V G +    R+  K  W+  ED  L+ AV ++   NW K+AE    +TD+QC HRW KV N    KGPW+ E+D ++ ELVG++GAK+WS+IA QLPGR GKQCRERW+NHLNP I +  WS  EDR +++ HR  GNKWAEIAK   GRTDNAIKNHWNS++KRK D   AR
Sbjct:   11 VTGRIGGPTRRSAKGGWTPAEDDILRRAVAQYKGKNWKKIAEYFEERTDVQCLHRWQKVLNPELVKGPWTKEEDAKIIELVGQLGAKQWSKIAQQLPGRIGKQCRERWYNHLNPDIKREEWSREEDRALIIAHRAFGNKWAEIAKTFVGRTDNAIKNHWNSTLKRKVDEALAR 183          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A9UVK9_MONBE (Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVK9_MONBE)

HSP 1 Score: 207 bits (527), Expect = 1.610e-61
Identity = 91/151 (60.26%), Postives = 113/151 (74.83%), Query Frame = 0
Query:  118 RWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRK 267
            RW+  ED +L +AVE+H   NW KVAEE  G+TD+QC HRW KV N    KGPW+ E+D  V +LV + G K+WS IA  L GR GKQCRERWHNHL+P I K PW+A E+R I+  H  LGNKWAEIAK++PGRTDN++KNHWNS+M+R+
Sbjct:   44 RWTKAEDQRLVEAVERHQGKNWKKVAEEFEGRTDVQCLHRWQKVLNPDLVKGPWTKEEDDLVIQLVDKYGPKRWSLIAGHLKGRIGKQCRERWHNHLHPDIKKTPWTAEEERVIMNAHLRLGNKWAEIAKLLPGRTDNSVKNHWNSTMRRR 194          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: C1EGX6_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGX6_MICCC)

HSP 1 Score: 205 bits (522), Expect = 4.380e-61
Identity = 92/164 (56.10%), Postives = 116/164 (70.73%), Query Frame = 0
Query:  112 RKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFAR 274
            R+  K  W+  ED  L+ AV ++   NW K+AE    +TD+QC HRW KV N    KGPW+ E+D ++ ELVG++GAK+WS+IA QLPGR GKQCRERW+NHLNP I +  WS  EDR +++ H   GN+WAEIAK   GRTDNAIKNHWNS++KRK D   AR
Sbjct:    7 RRSAKGGWTPDEDDILRRAVAQYKGKNWKKIAEYFEERTDVQCLHRWQKVLNPELVKGPWTKEEDDKIIELVGQLGAKQWSKIAQQLPGRIGKQCRERWYNHLNPEIKREEWSREEDRKLIIAHHQFGNRWAEIAKTFVGRTDNAIKNHWNSTLKRKVDEALAR 170          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A7S0XPS0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XPS0_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.030e-60
Identity = 109/193 (56.48%), Postives = 135/193 (69.95%), Query Frame = 0
Query:  118 RWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFAR---TDLR----PDSPEFEGMGFKDMTDVALAAVRG 302
            +W+  ED  L+DAVE+HG  NW  ++  + G++++QC HRW KV      KGPW+AE+DR+V ELV + GAKKWSQIA +LPGR GKQCRERWHNHLNP I+K  W   EDRTIL  H  LGN+WAEIAK++PGRTDNAIKNHWNSSM+RK +   +R    D R     +   F+ MG  D+ D  L AVRG
Sbjct:  181 KWTKQEDDTLRDAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLVKGPWTAEEDRKVVELVKKYGAKKWSQIAQELPGRIGKQCRERWHNHLNPEISKEAWKEDEDRTILESHVTLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIEKYLSRKQGVDERNIRYTEDGRFDFMG--DL-DGVLNAVRG 370          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: B8CFV0_THAPS (MYB DNA binding protein/ transcription factor-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFV0_THAPS)

HSP 1 Score: 201 bits (512), Expect = 8.620e-60
Identity = 90/152 (59.21%), Postives = 113/152 (74.34%), Query Frame = 0
Query:  119 WSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGG-TKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAD 269
            WS  ED  L++AVE++G  NW  +A+ +  +T++QC HRW KV      KGPW+ E+D  V  LV + GAKKWS IA+ LPGR GKQCRERWHNHLNP I++  WS  EDRTIL  H  +GN+WAEI+K++PGRTDNAIKNHWNSSMK+K +
Sbjct:    1 WSAEEDEALRNAVERNGPKNWKLIAKHLPQRTEVQCLHRWQKVLKPSLVKGPWTPEEDHLVLRLVQKYGAKKWSLIASHLPGRIGKQCRERWHNHLNPGISRGAWSFEEDRTILQFHENVGNRWAEISKLLPGRTDNAIKNHWNSSMKKKIE 152          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A0S7GPH4_9TELE (MYB (Fragment) n=4 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7GPH4_9TELE)

HSP 1 Score: 206 bits (525), Expect = 1.800e-59
Identity = 93/155 (60.00%), Postives = 113/155 (72.90%), Query Frame = 0
Query:  116 KTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGGT-KGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAD 269
            KTRW+  ED KLK  VE HG+ +W  +A  +  +TD+QC HRW KV N    KGPW+ E+D+RV ELV + GAK+WS IA  L GR GKQCRERWHNHLNP + K  W+  EDR I   H  LGN+WAEIAK++PGRTDNAIKNHWNS+M+RK +
Sbjct:   40 KTRWTREEDEKLKKLVELHGSEDWKLIASLLANRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194          
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Match: A0A7S4EER2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EER2_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.630e-59
Identity = 108/193 (55.96%), Postives = 134/193 (69.43%), Query Frame = 0
Query:  118 RWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKTDMQCFHRWTKVFNGGT-KGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGRTGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKADIVFAR------TDLR-PDSPEFEGMGFKDMTDVALAAVRG 302
            +W+  ED  LKDAVE+HG  NW  ++  + G++++QC HRW KV      KGPW+AE+DR+V ELV + GAKKWS IA  LPGR GKQCRERWHNHLNP I+K  W   EDR IL  H  LGN+WAEIAK++PGRTDNAIKNHWNSSM+RK +   A+      T++R  +   F+ MG  D+  V L AVRG
Sbjct:  179 KWTKQEDETLKDAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLIKGPWTAEEDRKVVELVKKHGAKKWSLIAQSLPGRIGKQCRERWHNHLNPEISKEAWKEKEDRVILESHIALGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIEKYLAKKQGVDETNIRYTEDGRFDFMG--DLEGV-LNAVRG 368          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7503.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPJ5_9PHAE2.130e-11866.78MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A1E7FEX6_9STRA3.890e-6462.09Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fr... [more]
A0A7S2WMH6_9STRA5.170e-6361.59Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0CT81_MICPS1.740e-6255.49Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A9UVK9_MONBE1.610e-6160.26Predicted protein (Fragment) n=1 Tax=Monosiga brev... [more]
C1EGX6_MICCC4.380e-6156.10Uncharacterized protein (Fragment) n=1 Tax=Micromo... [more]
A0A7S0XPS0_9STRA1.030e-6056.48Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
B8CFV0_THAPS8.620e-6059.21MYB DNA binding protein/ transcription factor-like... [more]
A0A0S7GPH4_9TELE1.800e-5960.00MYB (Fragment) n=4 Tax=Poeciliinae TaxID=586240 Re... [more]
A0A7S4EER2_9STRA2.630e-5955.96Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 218..266
e-value: 4.7E-14
score: 62.7
coord: 115..164
e-value: 5.2E-12
score: 55.9
coord: 166..215
e-value: 6.3E-16
score: 68.9
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 117..160
e-value: 2.0E-11
score: 43.9
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 118..162
e-value: 1.62698E-11
score: 56.815
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 221..261
e-value: 5.6704E-10
score: 52.5778
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 169..213
e-value: 4.15918E-13
score: 61.4374
NoneNo IPR availableGENE3D1.10.10.60coord: 220..267
e-value: 1.8E-18
score: 68.2
NoneNo IPR availableGENE3D1.10.10.60coord: 166..218
e-value: 1.6E-21
score: 78.0
NoneNo IPR availableGENE3D1.10.10.60coord: 110..162
e-value: 1.1E-13
score: 52.7
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 170..228
e-value: 7.3E-17
score: 61.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..446
NoneNo IPR availablePANTHERPTHR45614:SF5TRANSCRIPTIONAL ACTIVATOR MYBcoord: 110..292
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 110..292
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 162..217
score: 24.546
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 111..161
score: 11.627
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 218..268
score: 19.518
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 113..165
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 166..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7503contigC-tenellus_contig7503:12..2461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7503.1.1mRNA_C-tenellus_contig7503.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7503 12..3290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7503.1.1 ID=prot_C-tenellus_contig7503.1.1|Name=mRNA_C-tenellus_contig7503.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=446bp
MELDSHVDVGHKQCEDDVLVNAEYSGASDDDADDCSGQGERRSRRAAALK
AHETGKRIAEMILECDEEGDDEDEDEDEDGSTNAGRRKSDGSKENDESRA
AEVAGAVALERRKPIKTRWSTVEDGKLKDAVEKHGNSNWGKVAEEVVGKT
DMQCFHRWTKVFNGGTKGPWSAEDDRRVAELVGEVGAKKWSQIAAQLPGR
TGKQCRERWHNHLNPHINKNPWSAAEDRTILVQHRLLGNKWAEIAKVMPG
RTDNAIKNHWNSSMKRKADIVFARTDLRPDSPEFEGMGFKDMTDVALAAV
RGLVVVNNPNEPATRRGRPPRKRTPEEEEAQRLKKERTPKKGQRNSGTSG
SNVGGGAGGGRDNNSSFTPQKLVKASVSKTPTPAGYWGLTIPGKGSSMGG
IGSGGNGRRWGALGAVGSVDNPASDDDEGREMSAPTRSRRQRRQGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf