mRNA_C-tenellus_contig7483.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: D8LFS3_ECTSI (Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS3_ECTSI) HSP 1 Score: 148 bits (374), Expect = 5.190e-39 Identity = 76/132 (57.58%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 238 MLSSIVRSVGVAARGA--RPQTPALLQVWRGMCI-------------DGKIPEGHAVGRQKQEQEKSPFNRDPIFPPKGSGTKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKLVP 588 M S++ R VGVAAR A RPQ P WR DG IP+ H GRQK E+E FNRDPI PPKGSGTK MP EVPS+H ERVVGFEHPE+H + WF + AGK+HYV EID+YFKLVP Sbjct: 1 MFSTVARHVGVAARAAALRPQ-PTAAAAWRASAAALPQVARFSDGVGDGGIPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVP 131
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: A0A6U3QRH7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QRH7_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.890e-23 Identity = 52/83 (62.65%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 355 HAVGRQKQEQEKSP-----FNRDPIFPPKGSGTKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKLVP 588 H GR+ QE E FNRDPI PP G+GTK PI+VPS +DERVVGFE P H L WF M AGK+HYVS IDKYF LVP Sbjct: 45 HQGGRRLQEIEDEKLGLVTFNRDPIMPPVGAGTKENPIQVPSGYDERVVGFEDPTVHQLQWFTMTAGKLHYVSSIDKYFTLVP 127
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: A0A7S1XX62_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX62_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.530e-20 Identity = 57/123 (46.34%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 241 LSSIVRSVGVAARGARPQTPALLQVWRGMCI--DGKIP--EGHAVGRQKQE--QEKSP---FNRDPIFPPKGSGTKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKL 582 L + +R + AA P P R + I DG IP E GR+K E EKS FNRDPI PP G+GTK PI VPS+ ERVVGFE P+TH + WF ++A +Y+ +DKYFKL Sbjct: 6 LRTSMRPLAAAAARRAPMAPV-----RALAIESDGLIPDIEDQVFGRRKMELDAEKSGDLLFNRDPIVPPVGAGTKENPILVPSEFKERVVGFEDPDTHQIAWFCLQADATYYIESVDKYFKL 123
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: A0A6U1NDJ1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDJ1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 8.020e-17 Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 238 MLSSIVRSVGVAARGARPQTPALLQVWRGMCIDGKIP--EGHAVGRQKQEQEKSP-----FNRDPIFPPKGSGTKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKLV 585 MLS++ RS + PA + R + +DGK+P E G +K E E+ + RDP+ P G GT PI VPS ER VGFE P +H + WF ++ G +H+V EID YFKL+ Sbjct: 1 MLSAVRRSSALTQVTTAVVAPASHILGRFLAVDGKVPQDEEQQYGDRKYELEQEAKKEVAYVRDPVIPEPGQGTLANPILVPSAMKERAVGFEDPLSHQMQWFVLQEGDIHWVEEIDMYFKLI 123
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: A0A024FVF4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVF4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 5.790e-12 Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 355 HAVGRQKQEQEKSP-----FNRDPIFPPKGSG-TKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKL 582 HAVGRQ++E E FNRDPI + G +K PI VPS +D R +G H ++ + WFN++ GK+ YV +I+KYFKL Sbjct: 33 HAVGRQREELEDEKAGIITFNRDPIETDETQGNSKEDPILVPSFNDVRPIGVSHNDSSYVFWFNLQKGKIFYVPQIEKYFKL 114
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: A0A1W0A2M6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2M6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.010e-11 Identity = 39/81 (48.15%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 358 AVGRQKQEQEKSP-----FNRDPIFPPKGSG-TKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKL 582 AVGRQ E + + F+RDPIF + G +K+ PI VPS ERVVG H ++ + WFN+ GKV+YV + DKYFKL Sbjct: 32 AVGRQGDELKMAEQGIDLFSRDPIFSEETQGNSKDDPILVPSFQSERVVGISHNDSPYIKWFNLHEGKVYYVPDYDKYFKL 112
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: A0A485KGU5_9STRA (Aste57867_13701 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGU5_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.750e-11 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 358 AVGRQKQEQEKSP-----FNRDPIFPPKGSG-TKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKL 582 A+GRQ +E + FNRDP+ + G +K+ PI VPS + +R VG H ++ ++WFN+ GKVHYV + DKYFKL Sbjct: 32 AIGRQGEELHLAEEGIELFNRDPVSSEEHQGNSKDDPILVPSFNSQRAVGISHNDSPYIVWFNLDEGKVHYVPQFDKYFKL 112
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: T0PQP9_SAPDV (Uncharacterized protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PQP9_SAPDV) HSP 1 Score: 67.0 bits (162), Expect = 7.930e-10 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 358 AVGRQKQEQEKSP-----FNRDPIFPPKGSG-TKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKL 582 AVGRQ E + + F+RDPIF + G +K PI VPS + R +G H ++ + WFN+ GKV YV + DKYFKL Sbjct: 30 AVGRQGAELKLAEEGIELFSRDPIFTEESQGNSKENPILVPSFNSHRAIGISHNDSPYIKWFNLHEGKVFYVPDYDKYFKL 110
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: D8LFS5_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS5_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 1.040e-9 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = -3 Query: 1437 GYVLPAMLYIQTHRTELRQALASWRSESSSFDPNLLGRLLGLREFYLPMFMTVYGLVAMVAGVGTAL 1637 GYVLP +LY+++ ELRQA A+W +SS ++P L RL R F +P+FM ++G+VAMVAGV TA+ Sbjct: 391 GYVLPPLLYMKSCGHELRQAKAAWDKDSSEYEPALTERLWASRNFIVPVFMVLFGVVAMVAGVVTAV 457
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Match: A0A067CL80_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CL80_SAPPC) HSP 1 Score: 67.0 bits (162), Expect = 1.670e-9 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 358 AVGRQKQEQEKSP-----FNRDPIFPPKGSG-TKNMPIEVPSQHDERVVGFEHPETHVLLWFNMKAGKVHYVSEIDKYFKL 582 AVGRQ E + + F+RDPIF + G +K PI VPS + R +G H ++ + WFN+ GKV YV + DKYFKL Sbjct: 61 AVGRQGAELKLAEEGIELFSRDPIFTEESQGNSKENPILVPSFNSHRAIGISHNDSPYIKWFNLHEGKVFYVPDYDKYFKL 141 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7483.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7483.1.1 >prot_C-tenellus_contig7483.1.1 ID=prot_C-tenellus_contig7483.1.1|Name=mRNA_C-tenellus_contig7483.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=120bp MLSSIVRSVGVAARGARPQTPALLQVWRGMCIDGKIPEGHAVGRQKQEQEback to top mRNA from alignment at C-tenellus_contig7483:5055..6699+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7483.1.1 ID=mRNA_C-tenellus_contig7483.1.1|Name=mRNA_C-tenellus_contig7483.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1645bp|location=Sequence derived from alignment at C-tenellus_contig7483:5055..6699+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7483:5055..6699+ >mRNA_C-tenellus_contig7483.1.1 ID=mRNA_C-tenellus_contig7483.1.1|Name=mRNA_C-tenellus_contig7483.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=360bp|location=Sequence derived from alignment at C-tenellus_contig7483:5055..6699+ (Choristocarpus tenellus KU2346)back to top |