mRNA_C-tenellus_contig7359.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: A0A6H5L0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D3_9PHAE) HSP 1 Score: 191 bits (484), Expect = 3.610e-55 Identity = 97/121 (80.17%), Postives = 110/121 (90.91%), Query Frame = 1 Query: 1 QVKFPPVPDEPYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEIV 363 Q +FPP+PD+PYDLVVLGSGPGGEAAAVQA+RLGA VA+VEIKKSFGGPTGLTSKAVREAAKQI +AV +GGDRRRQ RRMW LRFPALR++AEVLQAAE+RDRL+KN L+IG AEI+ Sbjct: 57 QQEFPPLPDKPYDLVVLGSGPGGEAAAVQAARLGASVAVVEIKKSFGGPTGLTSKAVREAAKQINQAVTNVGGDRRRQTRRMWKLRFPALRAQAEVLQAAETRDRLSKNLIDLYIGEAEIL 177
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: W7T4Z3_9STRA (Soluble pyridine nucleotide transhydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4Z3_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.310e-50 Identity = 85/123 (69.11%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 1 QVKFPPVPDE-PYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEIVQ 366 Q FP D+ PYDL+VLGSGP GE A +A++LG KVAI+EIKK+FGGPTGLTSKAVREAAK+I+K VDQ+GGDR +QIRR+W RFPAL+SEAEV QAAE+RDRL KN C L+IG+A +V+ Sbjct: 89 QTAFPEKEDDTPYDLIVLGSGPAGETAGCKAAQLGQKVAIIEIKKAFGGPTGLTSKAVREAAKRILKTVDQVGGDRMKQIRRLWKKRFPALKSEAEVYQAAETRDRLVKNDCHLYIGSALLVK 211
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: K8YWP5_NANGC (Soluble pyridine nucleotide transhydrogenase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWP5_NANGC) HSP 1 Score: 169 bits (427), Expect = 1.560e-48 Identity = 85/123 (69.11%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 1 QVKFPPVPDE-PYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEIVQ 366 Q FP D+ PYDL+VLGSGP GE A +A++LG KVAI+EIKK+FGGPTGLTSKAVREAAK+I+K VDQ+GGDR +QIRR+W RFPAL+SEAEV QAAE+RDRL KN C L+IG+A +V+ Sbjct: 70 QTAFPEKEDDTPYDLIVLGSGPAGETAGCKAAQLGQKVAIIEIKKAFGGPTGLTSKAVREAAKRILKTVDQVGGDRMKQIRRLWKKRFPALKSEAEVYQAAETRDRLVKNDCHLYIGSALLVK 192
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: A0A4D9CSA5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSA5_9STRA) HSP 1 Score: 169 bits (427), Expect = 9.510e-47 Identity = 85/123 (69.11%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 1 QVKFPPVPDE-PYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEIVQ 366 Q FP D+ PYDL+VLGSGP GE A +A++LG KVAI+EIKK+FGGPTGLTSKAVREAAK+I+K VDQ+GGDR +QIRR+W RFPAL+SEAEV QAAE+RDRL KN C L+IG+A +V+ Sbjct: 89 QTAFPEKEDDTPYDLIVLGSGPAGETAGCKAAQLGQKVAIIEIKKAFGGPTGLTSKAVREAAKRILKTVDQVGGDRMKQIRRLWKKRFPALKSEAEVYQAAETRDRLVKNDCHLYIGSALLVK 211
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: A0A7S2Y1R6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1R6_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.030e-41 Identity = 77/111 (69.37%), Postives = 92/111 (82.88%), Query Frame = 1 Query: 28 EPYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEI 360 EPYDL+V+G GPGGEAAAV A++LGA VA++E K SFGGPTGLTSKAVREA K+I KA+DQ+GGDRRRQ+R +W RFP LRSEAEVLQAAESR +L ++IGAA + Sbjct: 57 EPYDLLVIGCGPGGEAAAVNAAKLGASVALIEKKSSFGGPTGLTSKAVREATKRICKAIDQVGGDRRRQVRGLWRRRFPVLRSEAEVLQAAESRGKLRDAGVDVYIGAARL 167
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: A0A7R9U251_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U251_9STRA) HSP 1 Score: 151 bits (381), Expect = 6.780e-41 Identity = 77/123 (62.60%), Postives = 98/123 (79.67%), Query Frame = 1 Query: 1 QVKFPPVP--DEPYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEIV 363 Q FPPVP DEP+DLVV+GSGPGGEAAA +A+ LGAKVA+VE K +FGGPTGLTSKAVREAA++I KAV+Q+GGD+ +QIR++W FPA R+EAEV QA E+R R L++GA +++ Sbjct: 78 QKDFPPVPPDDEPFDLVVVGSGPGGEAAAARAAALGAKVAVVERKAAFGGPTGLTSKAVREAAERIAKAVEQLGGDKVKQIRKLWKRNFPAFRAEAEVFQALETRRRYNAGGVSLYVGACQLL 200
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: A0A836CAQ8_9STRA (Pyr_redox_2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ8_9STRA) HSP 1 Score: 129 bits (325), Expect = 7.110e-37 Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 1 Query: 1 QVKFPPVPDEPYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMW 249 Q FP VP++ YDLVVLGSGPGGEA A +A++L A+VA+VEIK++FGGPTGLTSKAVREA KQIV+AVDQ+GGDRRRQIRR+W Sbjct: 9 QSAFPDVPEDGYDLVVLGSGPGGEAIATRAAQLSARVAVVEIKRAFGGPTGLTSKAVREATKQIVQAVDQVGGDRRRQIRRLW 91
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: A0A7S1NVB4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NVB4_9EUGL) HSP 1 Score: 134 bits (336), Expect = 8.070e-36 Identity = 73/121 (60.33%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 QVKFPPVPDEPYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEIV 363 Q FP E YDLVV+G+GPGGEA AV ASR GA+VAI+E +++FGGPTGLTSKAVREAAKQI D +GG+RR Q++ W F ALRSEAEV QAAESR RL ++ L+I I+ Sbjct: 177 QYAFPKAEGE-YDLVVVGAGPGGEATAVAASRFGARVAIIESRRAFGGPTGLTSKAVREAAKQISATCDALGGNRRLQMKMFWQRNFAALRSEAEVAQAAESRGRLQRSGVDLYISDKTIL 296
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: A0A6U8N6N8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8N6N8_9EUGL) HSP 1 Score: 134 bits (336), Expect = 5.610e-34 Identity = 73/121 (60.33%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 QVKFPPVPDEPYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEIV 363 Q FP E YDLVV+G+GPGGEA AV ASR GA+VAI+E +++FGGPTGLTSKAVREAAKQI D +GG+RR Q++ W F ALRSEAEV QAAESR RL ++ L+I I+ Sbjct: 177 QYAFPKAEGE-YDLVVVGAGPGGEATAVAASRFGARVAIIESRRAFGGPTGLTSKAVREAAKQISATCDALGGNRRLQMKMFWQRNFAALRSEAEVAQAAESRGRLQRSGVDLYISDKTIL 296
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Match: A0A7S1U0J3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0J3_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.180e-23 Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 1 Query: 115 IVEIKKSFGGPTGLTSKAVREAAKQIVKAVDQIGGDRRRQIRRMWTLRFPALRSEAEVLQAAESRDRLAKNQCQLFIGAAEIV 363 +VE K++FGGPTGLTSKAVREAA+++V+A +Q+GGD+R+Q+RR+W L FP+ +SEAEV QA E+R R LFIG +I+ Sbjct: 1 VVERKRAFGGPTGLTSKAVREAAERVVRAAEQLGGDKRKQMRRLWALNFPSFKSEAEVFQALETRRRYLSAGVDLFIGGTQIL 83 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7359.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7359.2.1 >prot_C-tenellus_contig7359.2.1 ID=prot_C-tenellus_contig7359.2.1|Name=mRNA_C-tenellus_contig7359.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=122bp QVKFPPVPDEPYDLVVLGSGPGGEAAAVQASRLGAKVAIVEIKKSFGGPTback to top mRNA from alignment at C-tenellus_contig7359:2029..3077- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7359.2.1 ID=mRNA_C-tenellus_contig7359.2.1|Name=mRNA_C-tenellus_contig7359.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1049bp|location=Sequence derived from alignment at C-tenellus_contig7359:2029..3077- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7359:2029..3077- >mRNA_C-tenellus_contig7359.2.1 ID=mRNA_C-tenellus_contig7359.2.1|Name=mRNA_C-tenellus_contig7359.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=366bp|location=Sequence derived from alignment at C-tenellus_contig7359:2029..3077- (Choristocarpus tenellus KU2346)back to top |