mRNA_C-tenellus_contig7359.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: D8LER9_ECTSI (Soluble pyridine nucleotide transhydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER9_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.100e-25 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 1 RPNRPATLPSGASLPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 RPNRP + SG+ LPF KG+VVDATEMGT+T+LPNA AIIGGGVIAVEYANVLA LGVGVSL+CK+E Sbjct: 80 RPNRPPKMRSGSRLPFMKGVVVDATEMGTITDLPNACAIIGGGVIAVEYANVLAGLGVGVSLLCKDE 146
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: A0A6H5L0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D3_9PHAE) HSP 1 Score: 103 bits (258), Expect = 2.180e-24 Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 1 Query: 1 RPNRPATLPSGASLPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 RPNRP + SG+ LPF KG+VVDATEMGT+T+LPNA AIIGGGVIAVEYA VLA LGVGVSL+CK+E Sbjct: 217 RPNRPPKMRSGSRLPFMKGVVVDATEMGTITDLPNACAIIGGGVIAVEYATVLAGLGVGVSLLCKDE 283
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: A0A836CA28_9STRA (Soluble pyridine nucleotide transhydogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA28_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 7.050e-20 Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 1 RPNRPATLPSGASLPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 R +RP + G ++PF KGIVVD+TEMG + LPNAVAI+GGGVIAVEYA VLA+LGVGVSL+C+++ Sbjct: 72 RAHRPKEIAPGVAIPFTKGIVVDSTEMGQIAELPNAVAILGGGVIAVEYATVLARLGVGVSLLCQDK 138
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: A0A7R9U251_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U251_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.130e-16 Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 1 RPNRPATLPS-GASLPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKE 198 RP RPATL + A +P+ G+V+D+T MG L NLP A A+ GGGVIAVEYA VLA+LGVGVSL+C E Sbjct: 234 RPARPATLRNTDAPIPWTPGVVMDSTGMGNLANLPKAAAVFGGGVIAVEYATVLARLGVGVSLLCSE 300
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: K8YWP5_NANGC (Soluble pyridine nucleotide transhydrogenase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWP5_NANGC) HSP 1 Score: 72.4 bits (176), Expect = 2.590e-13 Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 1 RPNRPATLPSGASLPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 RP+RP L G +P+ +V+DAT++ L LP+++A+IGGGVI+VEYA V A +G+ SL+C+EE Sbjct: 228 RPSRPKELRPGVPIPYTSRLVIDATQIANLKELPDSLAVIGGGVISVEYATVFAAMGLPTSLLCREE 294
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: A0A4D9CSA5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSA5_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.810e-13 Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 1 RPNRPATLPSGASLPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 RP+RP L G +P+ +V+DAT++ L LP+++A+IGGGVI+VEYA V A +G+ SL+C+EE Sbjct: 247 RPSRPKELRPGVPIPYTSRLVIDATQIANLKELPDSLAVIGGGVISVEYATVFAAMGLPTSLLCREE 313
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: A0A7S2Y1R6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1R6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.230e-13 Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 1 RPNRPATLP-SGASLPFKK--GIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 R N PA LP + +PF + G +VDAT+ ++ LPN++ IIGGGVIAVEYA V A+LGVGV+L+CKE+ Sbjct: 201 RANIPAVLPGTNVRIPFLESGGRIVDATKASGMSELPNSILIIGGGVIAVEYATVFAELGVGVTLLCKEK 270
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: H6WB84_VAULI (Soluble pyridine nucleotide transhydogenase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB84_VAULI) HSP 1 Score: 70.9 bits (172), Expect = 9.460e-13 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 1 RPNRPATLPSGASLPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 R +RP + S+ F +++D+TEM + +LP V IIGGGVIAVEYA V A+LGVGVSLIC ++ Sbjct: 60 RAHRPNKIYKNISIEFVPNVIIDSTEMSQIVDLPRTVGIIGGGVIAVEYATVFAKLGVGVSLICPKK 126
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: A0A7S1U0J3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0J3_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.740e-9 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 40 LPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 +P++ V D++ M ++ LP AVAIIG GVIA+EYA VLA+LGVGVSL+C E+ Sbjct: 130 VPWEAKGVTDSSGMSNISELPRAVAIIGSGVIALEYATVLARLGVGVSLLCAED 183
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Match: A0A6U8N6N8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8N6N8_9EUGL) HSP 1 Score: 55.5 bits (132), Expect = 2.640e-7 Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 37 SLPFKKGIVVDATEM-GTLT-NLPNAVAIIGGGVIAVEYANVLAQLGVGVSLICKEE 201 ++PF K +VD+TE+ TL LP IIGGG+IAVEYA VLA +GVG+++ C ++ Sbjct: 342 TVPFMKDRIVDSTEICSTLAMGLPKTCGIIGGGIIAVEYATVLASVGVGITIFCNKD 398 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7359.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7359.1.1 >prot_C-tenellus_contig7359.1.1 ID=prot_C-tenellus_contig7359.1.1|Name=mRNA_C-tenellus_contig7359.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=67bp RPNRPATLPSGASLPFKKGIVVDATEMGTLTNLPNAVAIIGGGVIAVEYAback to top mRNA from alignment at C-tenellus_contig7359:284..484- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7359.1.1 ID=mRNA_C-tenellus_contig7359.1.1|Name=mRNA_C-tenellus_contig7359.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=201bp|location=Sequence derived from alignment at C-tenellus_contig7359:284..484- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7359:284..484- >mRNA_C-tenellus_contig7359.1.1 ID=mRNA_C-tenellus_contig7359.1.1|Name=mRNA_C-tenellus_contig7359.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=201bp|location=Sequence derived from alignment at C-tenellus_contig7359:284..484- (Choristocarpus tenellus KU2346)back to top |