mRNA_C-tenellus_contig7278.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 128 bits (321), Expect = 1.010e-28 Identity = 68/152 (44.74%), Postives = 86/152 (56.58%), Query Frame = 3 Query: 1200 LGVWRVRAPKMAGRTSKNHKKG-----------------------DVYEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMV 1586 +G+WR+ + A R+SK + YE DCT+D WY++WY D LLPA+K MPWL+ K VVVQQD A+PHTGKGN EIL+ AG GW VTQP+ SP LNI +L F LK RV G S++E+V Sbjct: 213 IGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: UPI000B8A8D67 (uncharacterized protein LOC110790078 n=2 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A8D67) HSP 1 Score: 75.9 bits (185), Expect = 2.590e-11 Identity = 46/165 (27.88%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 1200 LGVWRVRAPKMAGRTSKNHKKGDVYEQDC-TLDHLWYREWYTDELLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIKK*YEENDETTLERAWQLHFVCTIKYFDTMGG 1691 LG++ A + SKN G + + ++ DE+LPA+++ P K + +QQD+A PH +++ A K +G++ R + QP+ SP +N+++L FFR ++ E+ +SV+E++K +K Y D +L W C ++ GG Sbjct: 83 LGIFAFTEQVAAKKNSKNRCAGTIETKALHSVTKPIIGSMLIDEMLPAIRSKWPLGACKEIWIQQDNARPHIHAEDTQFKEAATK-DGFNIRLINQPAQSPDMNVLDLGFFRTIQLIQYKEFPKSVDELIKEVKDAYNIFDPKSLNYTWLHLQYCMLEILQVNGG 246
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: UPI001FB192D6 (uncharacterized protein LOC124891932 n=1 Tax=Capsicum annuum TaxID=4072 RepID=UPI001FB192D6) HSP 1 Score: 72.8 bits (177), Expect = 1.960e-10 Identity = 46/150 (30.67%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 1233 AGRTSKNHKKGDVYE---QDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVV-VQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIKK*YEENDETTLERAWQLHFVCTIK 1670 A R SKN G + Q T D R + +++LPA++ P + + +Q+D+A PH GK + E + A + +G+ R QPSNSP LN+++LCFFR ++ + ++V+E+V+ +++ Y+E L + C I+ Sbjct: 112 AKRNSKNRTAGTMKTMPFQSVTKDIT--RVFLEEKVLPAIRAKWPASDSNNTIFLQKDNARPHIGKNDLEFIEAA-RQDGFDIRLCFQPSNSPDLNVLDLCFFRGIQSLQYQKAPKNVDELVEAVERSYDEMKAKQLNHVFLTLQSCMIE 258
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: W4G9V6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9V6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.760e-8 Identity = 39/130 (30.00%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 1200 LGVWRVRAPKMAGRTSKNHKKGDVYEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVK 1589 +G+W A R S+N G + ++ YR++ ++PA+K P + KHVV+Q D+ATPH + ++ L + T+GW+ +QP NSP LN+++L FF ++ SV+++++ Sbjct: 190 IGMWPCVKYLPAARNSRNRATGTLVTTLVNVEGELYRDYVMTRVIPAIKACFPSMN-KHVVLQDDNATPH--RVITDELLASVSTDGWTFVVRSQPPNSPDLNVLDLGFFASIQALQYKFESHSVDDVIR 316
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: A0A1U8EH76_CAPAN (serine/threonine-protein kinase Nek6-like n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A1U8EH76_CAPAN) HSP 1 Score: 63.2 bits (152), Expect = 3.170e-7 Identity = 31/98 (31.63%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 1323 DELLPAVKTMMPWLQGKH-VVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIKK*YEE 1613 +++LPA++ P + + +Q D+A PH G + E++ AG+ + R QPSNSP LN+++LCFFR ++ + ++V+E+V+ +++ ++E Sbjct: 20 EKVLPAIRAKWPASDSNNPIFLQLDNARPHIGNHDLEVIEAAGQDR-FDIRLCFQPSNSPDLNVLDLCFFRAIQSLQYQKATKNVDELVEAVERCFDE 116
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: UPI00053FE848 (uncharacterized protein LOC104887828 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FE848) HSP 1 Score: 63.9 bits (154), Expect = 4.660e-7 Identity = 46/158 (29.11%), Postives = 73/158 (46.20%), Query Frame = 3 Query: 1239 RTSKNHKKGDV-------YEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIKK*YEENDETTLERAWQLHFVCTIKYFDTMGG 1691 R+S N G + +D T D L + +L A+ T P + K + +QQD+A PH + E + A + G+ V QP NSPKLN++++ +FR L+ E +V ++V+ + K Y+E TL W I+ GG Sbjct: 254 RSSNNRPAGTLETKAVTSITRDSTRDKL------INYVLSAIMTKWPAHRSKVIYIQQDNAKPHVNSRDPEWIV-ASRQNGFEFHLVQQPPNSPKLNLLDVGYFRALQTLQHKERPNTVLKLVQAVNKSYDEFHPKTLANVWHSLQYNMIEIIKVRGG 404
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 9.060e-7 Identity = 42/148 (28.38%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 1200 LGVWRVRAPKMAGRTSKNHKKGDVYEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIKK*YEENDETTLERAW 1643 LG++ A R+S++ KG T+ Y + + +LPA+ T P + K + +QQD A PH G E+++ A G + + VTQP+NSP LNI++L FF ++ + ++++E + + + + E L+ W Sbjct: 214 LGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFP-SRWKTLYIQQDGARPHCTDGCPELVASAASF-GLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVW 359 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7278.5.1 >prot_C-tenellus_contig7278.5.1 ID=prot_C-tenellus_contig7278.5.1|Name=mRNA_C-tenellus_contig7278.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=125bp MAGRTSKNHKKGDVYEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVback to top mRNA from alignment at C-tenellus_contig7278:3958..5826- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7278.5.1 ID=mRNA_C-tenellus_contig7278.5.1|Name=mRNA_C-tenellus_contig7278.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1869bp|location=Sequence derived from alignment at C-tenellus_contig7278:3958..5826- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7278:3958..5826- >mRNA_C-tenellus_contig7278.5.1 ID=mRNA_C-tenellus_contig7278.5.1|Name=mRNA_C-tenellus_contig7278.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=375bp|location=Sequence derived from alignment at C-tenellus_contig7278:3958..5826- (Choristocarpus tenellus KU2346)back to top |