mRNA_C-tenellus_contig7272.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE) HSP 1 Score: 308 bits (788), Expect = 5.370e-96 Identity = 189/433 (43.65%), Postives = 235/433 (54.27%), Query Frame = 2 Query: 164 FATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGL-----RVRGRDATSPLAVPSTEGTRNPLTA-----------------------------------MIHVRRWVRRQRRSVAAVLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEP-RAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTS-KFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCLCQYA 1336 +A QPDVVLS ERD YYA+ LLGE SEL E L+G+RR +L PE++ LA+ LY+GLT +GKQTLGQEYC + LV + R G R++ LS ++ YT L V +PY Q R++EGWHGLR LRDPFG ++ V + V G A + A + V W RR+R +++ VL+W RLHL FYF+GR+ + AMRA+GARL Y R + E R +Y +LGL LL+Q AAEAATA + + R+ A E S +GE G D A+ +VPA TP D LFP S RRCSLCM+ RE +ATPCGHLFCWECIVGWCQTNPECPLCRQPV PQ+IVCL QYA Sbjct: 11 YAAQPDVVLSQERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSG---RGGGRESSP------LSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATA-SAETAERWRATARAALSESFPRSTEGEAVCGEGGGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 433
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA) HSP 1 Score: 223 bits (568), Expect = 3.600e-64 Identity = 142/411 (34.55%), Postives = 194/411 (47.20%), Query Frame = 2 Query: 194 MERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKL-YTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRR------------------------------SVAAVLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCLCQY 1333 MERDTYY L + + ++LE +G RR+S+L E+ +LA LY GLT +G+QT+GQEYCD++ SR+G+ D P S + Y+++ V PY RL GW LR +R+PF R + +M + + A +P+A P +G+R+ ++ A VL WL HL F+ NGRY + AMRA RLMYNRAQD P +YTILG+ +L + E R++ + S G+ G N +VP +T A RC+LCM PRE+ +AT CGHLFCWECIVGWC+TNPECPLCRQP +PQ+IVC+ Y Sbjct: 1 MERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMF------SRNGLCDV----------PLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKA--------------------NLASQRVPGLSGSDTEAAA-----RRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A1W0A079_9STRA (Peroxisome assembly protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A079_9STRA) HSP 1 Score: 171 bits (433), Expect = 9.410e-45 Identity = 130/407 (31.94%), Postives = 195/407 (47.91%), Query Frame = 2 Query: 167 ATQPDVVLSMERDTYYAHTLLGESVSELLE-----GLIGSRRSSL-LGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRRSVA---------AVLDWLQR---LHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCLCQY 1333 A QP V+L+ +D YY LL + V +++E G GS + + L PE+++++ LY GLT G QT+G+EYCD+ V I K +LS S + +L V PY Q R GW L+ G+ + ++ E LR++G+ T A +TE T L + + ++ +S++ ++ W Q LHL FFY NGRY A RA+G R + R P A+++ILG +++++A +A + + + L V LV DN +KA+VP + P + P+ R+C+LC+ R + S TPCGH+FCWECI+GWCQ PECPLCRQ VQPQ + C+ Y Sbjct: 9 APQPRVILAATKDDYYVSELLNQ-VHDVVEKVRFWGRPGSGSTPMSLDPELQLISKLLYLGLT---GSQTMGEEYCDIYRV-----------QGIMPK---MLSTPSKAAWMLLSTVFPYVQERSHLGWANLQ----------PGAAQCQLQQARLRAR---ERLRLQGQQHTMISAPVTTEETPTKLGLFLQRLDDLVKKLKSMSKDFETRTGTSLQTWTQSFLVLHLAFFYLNGRYFDMAKRAMGIRYVLTRKLTLPSAQFSILGYLIIIRLAMSSAMYLPQLLRLLL--------------GVQSPSPLVH-----------DNHVKARVPV---DDLPTNTDTIPA--RKCALCLTERSHPSMTPCGHVFCWECIIGWCQNKPECPLCRQQVQPQDVKCIYNY 354
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A2C9W794_MANES (RING-type domain-containing protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W794_MANES) HSP 1 Score: 161 bits (408), Expect = 1.890e-40 Identity = 121/407 (29.73%), Postives = 194/407 (47.67%), Query Frame = 2 Query: 155 SFPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLA-VPSTEGTRNPLTAMIHVRR-----WVRRQRRSVAA------VLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLC-----GYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324 SFP A QP+++ + E+D YA + + ++ + L G+R + E ++L LYY LT SG+QTLG+EYCD+ V G+ +PA L+ + +PY R+ R+ ++R ++++++V G+P + +S + +PS+ TR ++ + +R+ WV +R AA +L + R +L FFYF G Y + RA G R ++ R +Y ILG+FLL+Q+ AA ++R +S+ S V S Q S G L + G D+A ++ A G T +C+LC++ R+Y +AT CGH+FCW CI+ WC PECPLCR P+ ++VCL Sbjct: 67 SFPLAAQPEIMRAAEKDDQYA-SFVYDACRDAFRHLFGTRVAVAYQSETRLLGQMLYYVLTTGSGQQTLGEEYCDITQVA----GPHGLPP----------TPARRALFILYQSAVPYIAERISS--------------RV--ASRGIALADSVSGEPDSSFASGSSQIQSSLMIDLPSSSTTRTSVSLLSRMRQNFTGLWVHTVQRWPAALPVVREILQLILRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGVFLLIQLCIIAAEGLRRSNISSIASSVHQTSFNPNQSSGRGFPVLNEEGNLIPVESGRGGWASDSASTSE--ANGASAT-----------SKCTLCLSNRQYPTATACGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCL 429
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A218XUA6_PUNGR (RING-type domain-containing protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218XUA6_PUNGR) HSP 1 Score: 160 bits (404), Expect = 2.560e-40 Identity = 124/404 (30.69%), Postives = 187/404 (46.29%), Query Frame = 2 Query: 149 PSSFPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPV-VEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRR-----WVRRQRRSVAA------VLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324 P FP A QP+++ + E+D YA + + ++ + + L G+R + E ++L LYY LT SG+QTLG+EYCD+ V + G+ +PA L+ V PY R+ R+ ++R +S+S+ +P V GL PS+ R L+ + RR W+ +R A VL + R +L FFYF G Y + RA G R ++ R +Y ILG+FLL+Q+ AA ++R +S+ S V AS Q S G V + + VD+ G P S +C+LC++ R++ +ATPCGH+FCW CI+ WC PECPLCR P+ ++VCL Sbjct: 19 PRRFPPAAQPEIMRAAEKDDQYA-SFVYDACRDAIRHLFGTRVAVAYQNETQLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPY----GLPP----------TPARRVLFIVYQTAFPYIAERISS--------------RV--ASRGISLSDTYSDEPYGVSGLDNNEDQLIMTTGAPSSPTRRENLSVLSRFRRRLNGLWLNAVQRWPAMLPIAREVLQLVLRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGIFLLIQLCILAAEGLRRSNLSSITSSVHQASLGSHQTSA-GRGLPVLNEEG--NVISVDSD-------KGSWTNDPSTSEGTSGISKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPITHSSLVCL 381
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A7C8Z6D7_OPUST (RING-type domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8Z6D7_OPUST) HSP 1 Score: 157 bits (398), Expect = 2.220e-39 Identity = 122/431 (28.31%), Postives = 192/431 (44.55%), Query Frame = 2 Query: 86 GSGGNVSSLTRERSRSASNRPPSSFPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRRSVAA-----------VLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVS-------VDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324 G GG +S R + P F FA QP+++ + E+D +YA + + E+ + L G+R + E K+L LYY LT +G+QTLG+EYCD++ V +G+ +PA L+ + H +PY R+ R+ ++ S D +G ++ PS+ ++ +A+ ++ RR R + +L + R +L FFYF G Y + R G R M+ Q R +Y ILG+FLL+Q+ AA ++R+ +SL + S Q S +D E L+ T G+ V +T E +C+LC++ R + +ATPCGH+FCW CI+ WC PECPLCR P+ ++VCL Sbjct: 13 GMGGATTSAATSSGRRSEAEGPRRFLFAAQPEIMRAAEKDDHYA-SFVSEACRDAFRHLFGARIALAYHNETKLLGQMLYYILTTGAGQQTLGEEYCDIVQVA----GPNGLPP----------TPARRVLFVLYHTTVPYLAERMSS--------------RLASRGIILAESPGNISDDSAPWNSQQGTES------PSSSSSQTSSSALSRLKEKYRRLRSYITQQWPTLLPVAREILQLILRANLMFFYFEGLYYHISKRTAGIRYMFIGKQTNQRPRYQILGVFLLIQLCVIAAEGLRRRNLSSLGTSARPTSLGTYQQSEGRGLPILDEEGDLITTHSDKGGF---------PVESTSYSEV--------KGGSKCTLCLSNRLHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPLTHSSLVCL 391
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A7J7C4U2_TRIWF (Peroxisome biogenesis factor 10 -like protein n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C4U2_TRIWF) HSP 1 Score: 157 bits (396), Expect = 6.760e-39 Identity = 118/395 (29.87%), Postives = 187/395 (47.34%), Query Frame = 2 Query: 158 FPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRRSVAAV------LDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324 FP A QP+++ + E+D YA + + ++ + L L G+R + E K+L LY+ LT SG+QTLG+EYCD+ V G+ +PA L+ + IPY R+ + + S SN+ G V+ R ++S +VP+ + L ++ W+ +R AA+ L + R +L FFYF G Y + RA G R ++ R +Y ILG+FLL+Q+ AA ++R +S+ S V S Q + G D V + G + +A K + + + A+ S +C+LC++ R++ +AT CGH+FCW CI+ WC PECPLCR P+ ++VCL Sbjct: 54 FPSAAQPEIMRAAEKDDQYA-SFVYDACRDALRHLFGTRVAVAYQNETKLLGQMLYFVLTTGSGQQTLGEEYCDITQVA----GPLGLSP----------TPARRALFILYQTAIPYIAERISSRVASRGIV-------LADSQYEELYSNDAIGSSQVQSFRTIETPSSSDTSVPAFSRLKQKL-----IQFWLHAVQRWPAALPVAREFLQLILRANLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHQISLGSHQ-NFSGRDLPVLNEE---GNVIPMDADKGGMISDSTSTSESQAITGAS---KCTLCLSNRQHPTATACGHVFCWNCIIEWCNEKPECPLCRTPITHSSLVCL 414
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A4Y7IV86_PAPSO (RING-type domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IV86_PAPSO) HSP 1 Score: 156 bits (394), Expect = 7.930e-39 Identity = 120/398 (30.15%), Postives = 180/398 (45.23%), Query Frame = 2 Query: 158 FPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGW--HGLRYLRDPF----GRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRRSVAAVLDWLQ---RLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324 FP A QP+++ + E+D YA + + ++ + L G+R + E K++ LYY LT SG QTLG+EYCD+ V +++ G+ +PA LY V +PY R+ G+R F G G N T S S + G V S R + V++W + ++LQ R +L FFYF G Y + RA G R ++ R +Y ILG+FLL+Q+ A ++R +S+ S V S + + G L + +D AI A +T E A +C+LC++ R++ +ATPCGH+FCW CI+ WC PECPLCR PV ++VC+ Sbjct: 27 FPLAAQPEIMRAAEKDDQYA-SYVYDACRDAFRHLFGTRVAVAYQSETKLVGQMLYYILTTGSGHQTLGEEYCDITQVASSY----GLPP----------TPARRSLYIVYQTAVPYLAERISSRMAARGMRLADSQFDEMYGYNSRGRNETQSTSTTESSTSSLTGAST----------VLSRSKERLNRLWLYAVQKWPN----MLPYAREFLQLVFRANLMFFYFEGLYYHISKRAAGIRYVFIGKPLNQRPRYQILGVFLLIQLCIITAEGLRRSNLSSIASTVHQTSLGSHRTTGQGLPVLNEEGNLINSDSNLDKAIWAS-DSTSSSE----AQATVGGISKCTLCLSTRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPVTHSSLVCI 390
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A2G5DYM0_AQUCA (RING-type domain-containing protein n=5 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DYM0_AQUCA) HSP 1 Score: 156 bits (394), Expect = 9.350e-39 Identity = 119/404 (29.46%), Postives = 191/404 (47.28%), Query Frame = 2 Query: 158 FPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTA----MIHVRRW---VRRQRRSVAAVLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGG-------ASGEQGQVSVDGEDALVRTSKFLC-GYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324 FP A QP+V+ + E+D YA + + E+ + L G+R + E K+L LYY +T SG+QTLG+EYCD+ V + + G+ +PA L+ V +PY R+ G ++ S+ + ++ G+ V+ L GR ++SP + + TR ++ V++W + R + VL R +L FFYF G Y + RA G R M+ R +Y +LG+FLL+Q+ A ++R +S+ S V ASG +G ++ E L+ T+ L G D ++ G +C+LC++ R++ +AT CGH+FCW CI+ WC PECPLCR PV +++C+ Sbjct: 34 FPLAAQPEVMRAAEKDDQYA-SYVSEACRDAFRHLFGTRVAVAHQSETKLLGQMLYYVITTGSGQQTLGEEYCDITQVASTY----GLPP----------TPARRALFIVYQTAVPYIAERISSRVAAR-------GIMLSDSHSSEIYGDDTDGENQVQSLVSTGRLSSSPSSGSFSVFTRLKQKFYRMWLLAVQKWPNILPYAREMLQLVL----RTNLMFFYFEGLYYHISKRAAGIRYMFIGKPLNQRPRYQLLGVFLLIQLCIITAEGLRRSNLSSIASSVHQSSLGSHQASGARGLPVLNEEGNLITTNTSLDRGNWASDQTSLSETQGVG-------------GISKCTLCLSTRQHPTATTCGHVFCWNCIMEWCNEKPECPLCRTPVTHSSLICI 398
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: UPI001CB9C82D (peroxisome biogenesis factor 10 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9C82D) HSP 1 Score: 155 bits (393), Expect = 1.030e-38 Identity = 124/404 (30.69%), Postives = 191/404 (47.28%), Query Frame = 2 Query: 158 FPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEG--TRNPLTAM--------IH-VRRW---VRRQRRSVAAVLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVD-GEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324 FP A QP+++ + ++D YA + + E+ + L G+R + E K+L LYY LT +G+QTLG+EYCD+ V ++ G+ +PA L+ V +PY R+ RI ++R ++++ ++ D ++ R D S + VPS + +PL+ + +H V+RW + R S+ +L R +L FFYF G Y + RA G R ++ R +Y ILG+FLLVQ+ AA ++R AS+ S V S Q S G L + G + VP + Q S +C+LC++ R+ +ATPCGH+FCW CI+ WC PECPLCR P+ +VCL Sbjct: 30 FPLAAQPEIMRAAQKDDQYA-SFVYEACRDAFRHLFGTRAAISYQSETKLLGQMLYYILTTGAGQQTLGEEYCDITQVAGSY----GLPP----------TPARRALFIVYQSAVPYIAERVSS--------------RI--ASRGMALTESMSDD--LDTFRSSSEDQLSMIHVPSPSPRVSISPLSRLKEKIGGIWLHIVQRWPAVLPLARESLQLLL----RANLMFFYFEGLYYHISKRAAGIRYVFIGKPMNQRPRYQILGMFLLVQLCIIAAEGLRRSNLASITSSVQHTSLRVHQASGGRGLPVLNEEGNLITGDTGKGFGVSEAVPTSESQS---------SGISKCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPLTHSTLVCL 387 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7272.2.1 >prot_C-tenellus_contig7272.2.1 ID=prot_C-tenellus_contig7272.2.1|Name=mRNA_C-tenellus_contig7272.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=422bp MTARGSGGNVSSLTRERSRSASNRPPSSFPFATQPDVVLSMERDTYYAHTback to top mRNA from alignment at C-tenellus_contig7272:2942..4820- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7272.2.1 ID=mRNA_C-tenellus_contig7272.2.1|Name=mRNA_C-tenellus_contig7272.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1879bp|location=Sequence derived from alignment at C-tenellus_contig7272:2942..4820- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7272:2942..4820- >mRNA_C-tenellus_contig7272.2.1 ID=mRNA_C-tenellus_contig7272.2.1|Name=mRNA_C-tenellus_contig7272.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1266bp|location=Sequence derived from alignment at C-tenellus_contig7272:2942..4820- (Choristocarpus tenellus KU2346)back to top |