mRNA_C-tenellus_contig7272.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7272.2.1
Unique NamemRNA_C-tenellus_contig7272.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 5.370e-96
Identity = 189/433 (43.65%), Postives = 235/433 (54.27%), Query Frame = 2
Query:  164 FATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGL-----RVRGRDATSPLAVPSTEGTRNPLTA-----------------------------------MIHVRRWVRRQRRSVAAVLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEP-RAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTS-KFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCLCQYA 1336
            +A QPDVVLS ERD YYA+ LLGE  SEL E L+G+RR  +L PE++ LA+ LY+GLT  +GKQTLGQEYC + LV +    R G R++        LS   ++ YT L V +PY Q R++EGWHGLR LRDPFG     ++             V   +      V G  A +  A                                                +  V  W RR+R +++ VL+W  RLHL  FYF+GR+ + AMRA+GARL Y R + E  R +Y +LGL LL+Q AAEAATA   + +   R+    A  E    S +GE            G    D A+  +VPA     TP D  LFP S RRCSLCM+ RE  +ATPCGHLFCWECIVGWCQTNPECPLCRQPV PQ+IVCL QYA
Sbjct:   11 YAAQPDVVLSQERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSG---RGGGRESSP------LSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATA-SAETAERWRATARAALSESFPRSTEGEAVCGEGGGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 433          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.600e-64
Identity = 142/411 (34.55%), Postives = 194/411 (47.20%), Query Frame = 2
Query:  194 MERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKL-YTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRR------------------------------SVAAVLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCLCQY 1333
            MERDTYY   L  + + ++LE  +G RR+S+L  E+ +LA  LY GLT  +G+QT+GQEYCD++       SR+G+ D           P S +  Y+++ V  PY   RL  GW  LR +R+PF R    +    +M  +       +        A +P+A P  +G+R+   ++                                            A VL WL   HL  F+ NGRY + AMRA   RLMYNRAQD P  +YTILG+ +L +   E      R++   + S   G+ G                           N    +VP     +T   A        RC+LCM PRE+ +AT CGHLFCWECIVGWC+TNPECPLCRQP +PQ+IVC+  Y
Sbjct:    1 MERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMF------SRNGLCDV----------PLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKA--------------------NLASQRVPGLSGSDTEAAA-----RRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A1W0A079_9STRA (Peroxisome assembly protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A079_9STRA)

HSP 1 Score: 171 bits (433), Expect = 9.410e-45
Identity = 130/407 (31.94%), Postives = 195/407 (47.91%), Query Frame = 2
Query:  167 ATQPDVVLSMERDTYYAHTLLGESVSELLE-----GLIGSRRSSL-LGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRRSVA---------AVLDWLQR---LHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCLCQY 1333
            A QP V+L+  +D YY   LL + V +++E     G  GS  + + L PE+++++  LY GLT   G QT+G+EYCD+  V             I  K   +LS  S   + +L  V PY Q R   GW  L+           G+ +       ++     E LR++G+  T   A  +TE T   L   +     + ++ +S++         ++  W Q    LHL FFY NGRY   A RA+G R +  R    P A+++ILG  +++++A  +A  + + +   L               V     LV            DN +KA+VP     + P +    P+  R+C+LC+  R + S TPCGH+FCWECI+GWCQ  PECPLCRQ VQPQ + C+  Y
Sbjct:    9 APQPRVILAATKDDYYVSELLNQ-VHDVVEKVRFWGRPGSGSTPMSLDPELQLISKLLYLGLT---GSQTMGEEYCDIYRV-----------QGIMPK---MLSTPSKAAWMLLSTVFPYVQERSHLGWANLQ----------PGAAQCQLQQARLRAR---ERLRLQGQQHTMISAPVTTEETPTKLGLFLQRLDDLVKKLKSMSKDFETRTGTSLQTWTQSFLVLHLAFFYLNGRYFDMAKRAMGIRYVLTRKLTLPSAQFSILGYLIIIRLAMSSAMYLPQLLRLLL--------------GVQSPSPLVH-----------DNHVKARVPV---DDLPTNTDTIPA--RKCALCLTERSHPSMTPCGHVFCWECIIGWCQNKPECPLCRQQVQPQDVKCIYNY 354          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A2C9W794_MANES (RING-type domain-containing protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W794_MANES)

HSP 1 Score: 161 bits (408), Expect = 1.890e-40
Identity = 121/407 (29.73%), Postives = 194/407 (47.67%), Query Frame = 2
Query:  155 SFPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLA-VPSTEGTRNPLTAMIHVRR-----WVRRQRRSVAA------VLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLC-----GYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324
            SFP A QP+++ + E+D  YA + + ++  +    L G+R +     E ++L   LYY LT  SG+QTLG+EYCD+  V        G+            +PA   L+ +    +PY   R+                R+  ++R ++++++V G+P         +  +S +  +PS+  TR  ++ +  +R+     WV   +R  AA      +L  + R +L FFYF G Y   + RA G R ++       R +Y ILG+FLL+Q+   AA  ++R   +S+ S V   S    Q S  G   L      +      G    D+A  ++  A G   T            +C+LC++ R+Y +AT CGH+FCW CI+ WC   PECPLCR P+   ++VCL
Sbjct:   67 SFPLAAQPEIMRAAEKDDQYA-SFVYDACRDAFRHLFGTRVAVAYQSETRLLGQMLYYVLTTGSGQQTLGEEYCDITQVA----GPHGLPP----------TPARRALFILYQSAVPYIAERISS--------------RV--ASRGIALADSVSGEPDSSFASGSSQIQSSLMIDLPSSSTTRTSVSLLSRMRQNFTGLWVHTVQRWPAALPVVREILQLILRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGVFLLIQLCIIAAEGLRRSNISSIASSVHQTSFNPNQSSGRGFPVLNEEGNLIPVESGRGGWASDSASTSE--ANGASAT-----------SKCTLCLSNRQYPTATACGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCL 429          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A218XUA6_PUNGR (RING-type domain-containing protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218XUA6_PUNGR)

HSP 1 Score: 160 bits (404), Expect = 2.560e-40
Identity = 124/404 (30.69%), Postives = 187/404 (46.29%), Query Frame = 2
Query:  149 PSSFPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPV-VEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRR-----WVRRQRRSVAA------VLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324
            P  FP A QP+++ + E+D  YA + + ++  + +  L G+R +     E ++L   LYY LT  SG+QTLG+EYCD+  V   +    G+            +PA   L+ V     PY   R+                R+  ++R +S+S+    +P  V GL             PS+   R  L+ +   RR     W+   +R  A       VL  + R +L FFYF G Y   + RA G R ++       R +Y ILG+FLL+Q+   AA  ++R   +S+ S V  AS    Q S  G    V   +     + VD+         G     P      S   +C+LC++ R++ +ATPCGH+FCW CI+ WC   PECPLCR P+   ++VCL
Sbjct:   19 PRRFPPAAQPEIMRAAEKDDQYA-SFVYDACRDAIRHLFGTRVAVAYQNETQLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPY----GLPP----------TPARRVLFIVYQTAFPYIAERISS--------------RV--ASRGISLSDTYSDEPYGVSGLDNNEDQLIMTTGAPSSPTRRENLSVLSRFRRRLNGLWLNAVQRWPAMLPIAREVLQLVLRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGIFLLIQLCILAAEGLRRSNLSSITSSVHQASLGSHQTSA-GRGLPVLNEEG--NVISVDSD-------KGSWTNDPSTSEGTSGISKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPITHSSLVCL 381          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A7C8Z6D7_OPUST (RING-type domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8Z6D7_OPUST)

HSP 1 Score: 157 bits (398), Expect = 2.220e-39
Identity = 122/431 (28.31%), Postives = 192/431 (44.55%), Query Frame = 2
Query:   86 GSGGNVSSLTRERSRSASNRPPSSFPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRRSVAA-----------VLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVS-------VDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324
            G GG  +S      R +    P  F FA QP+++ + E+D +YA + + E+  +    L G+R +     E K+L   LYY LT  +G+QTLG+EYCD++ V       +G+            +PA   L+ + H  +PY   R+                R+      ++ S     D        +G ++      PS+  ++   +A+  ++   RR R  +             +L  + R +L FFYF G Y   + R  G R M+   Q   R +Y ILG+FLL+Q+   AA  ++R+  +SL +     S    Q S       +D E  L+ T     G+          V +T   E             +C+LC++ R + +ATPCGH+FCW CI+ WC   PECPLCR P+   ++VCL
Sbjct:   13 GMGGATTSAATSSGRRSEAEGPRRFLFAAQPEIMRAAEKDDHYA-SFVSEACRDAFRHLFGARIALAYHNETKLLGQMLYYILTTGAGQQTLGEEYCDIVQVA----GPNGLPP----------TPARRVLFVLYHTTVPYLAERMSS--------------RLASRGIILAESPGNISDDSAPWNSQQGTES------PSSSSSQTSSSALSRLKEKYRRLRSYITQQWPTLLPVAREILQLILRANLMFFYFEGLYYHISKRTAGIRYMFIGKQTNQRPRYQILGVFLLIQLCVIAAEGLRRRNLSSLGTSARPTSLGTYQQSEGRGLPILDEEGDLITTHSDKGGF---------PVESTSYSEV--------KGGSKCTLCLSNRLHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPLTHSSLVCL 391          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A7J7C4U2_TRIWF (Peroxisome biogenesis factor 10 -like protein n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C4U2_TRIWF)

HSP 1 Score: 157 bits (396), Expect = 6.760e-39
Identity = 118/395 (29.87%), Postives = 187/395 (47.34%), Query Frame = 2
Query:  158 FPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRRSVAAV------LDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324
            FP A QP+++ + E+D  YA + + ++  + L  L G+R +     E K+L   LY+ LT  SG+QTLG+EYCD+  V        G+            +PA   L+ +    IPY   R+         +       +  S      SN+  G   V+  R     ++S  +VP+    +  L     ++ W+   +R  AA+      L  + R +L FFYF G Y   + RA G R ++       R +Y ILG+FLL+Q+   AA  ++R   +S+ S V   S    Q +  G D  V   +   G +   +A K  + +     +   A+   S   +C+LC++ R++ +AT CGH+FCW CI+ WC   PECPLCR P+   ++VCL
Sbjct:   54 FPSAAQPEIMRAAEKDDQYA-SFVYDACRDALRHLFGTRVAVAYQNETKLLGQMLYFVLTTGSGQQTLGEEYCDITQVA----GPLGLSP----------TPARRALFILYQTAIPYIAERISSRVASRGIV-------LADSQYEELYSNDAIGSSQVQSFRTIETPSSSDTSVPAFSRLKQKL-----IQFWLHAVQRWPAALPVAREFLQLILRANLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHQISLGSHQ-NFSGRDLPVLNEE---GNVIPMDADKGGMISDSTSTSESQAITGAS---KCTLCLSNRQHPTATACGHVFCWNCIIEWCNEKPECPLCRTPITHSSLVCL 414          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A4Y7IV86_PAPSO (RING-type domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IV86_PAPSO)

HSP 1 Score: 156 bits (394), Expect = 7.930e-39
Identity = 120/398 (30.15%), Postives = 180/398 (45.23%), Query Frame = 2
Query:  158 FPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGW--HGLRYLRDPF----GRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTAMIHVRRWVRRQRRSVAAVLDWLQ---RLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324
            FP A QP+++ + E+D  YA + + ++  +    L G+R +     E K++   LYY LT  SG QTLG+EYCD+  V +++    G+            +PA   LY V    +PY   R+       G+R     F    G    G N T S S        + G             V S    R     +  V++W       +    ++LQ   R +L FFYF G Y   + RA G R ++       R +Y ILG+FLL+Q+    A  ++R   +S+ S V   S    + +  G   L      +     +D AI A   +T   E    A        +C+LC++ R++ +ATPCGH+FCW CI+ WC   PECPLCR PV   ++VC+
Sbjct:   27 FPLAAQPEIMRAAEKDDQYA-SYVYDACRDAFRHLFGTRVAVAYQSETKLVGQMLYYILTTGSGHQTLGEEYCDITQVASSY----GLPP----------TPARRSLYIVYQTAVPYLAERISSRMAARGMRLADSQFDEMYGYNSRGRNETQSTSTTESSTSSLTGAST----------VLSRSKERLNRLWLYAVQKWPN----MLPYAREFLQLVFRANLMFFYFEGLYYHISKRAAGIRYVFIGKPLNQRPRYQILGVFLLIQLCIITAEGLRRSNLSSIASTVHQTSLGSHRTTGQGLPVLNEEGNLINSDSNLDKAIWAS-DSTSSSE----AQATVGGISKCTLCLSTRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPVTHSSLVCI 390          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: A0A2G5DYM0_AQUCA (RING-type domain-containing protein n=5 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DYM0_AQUCA)

HSP 1 Score: 156 bits (394), Expect = 9.350e-39
Identity = 119/404 (29.46%), Postives = 191/404 (47.28%), Query Frame = 2
Query:  158 FPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEGTRNPLTA----MIHVRRW---VRRQRRSVAAVLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGG-------ASGEQGQVSVDGEDALVRTSKFLC-GYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324
            FP A QP+V+ + E+D  YA + + E+  +    L G+R +     E K+L   LYY +T  SG+QTLG+EYCD+  V + +    G+            +PA   L+ V    +PY   R+              G  ++ S+ +    ++  G+  V+ L   GR ++SP +   +  TR         ++ V++W   +   R  +  VL    R +L FFYF G Y   + RA G R M+       R +Y +LG+FLL+Q+    A  ++R   +S+ S V         ASG +G   ++ E  L+ T+  L  G    D    ++    G                +C+LC++ R++ +AT CGH+FCW CI+ WC   PECPLCR PV   +++C+
Sbjct:   34 FPLAAQPEVMRAAEKDDQYA-SYVSEACRDAFRHLFGTRVAVAHQSETKLLGQMLYYVITTGSGQQTLGEEYCDITQVASTY----GLPP----------TPARRALFIVYQTAVPYIAERISSRVAAR-------GIMLSDSHSSEIYGDDTDGENQVQSLVSTGRLSSSPSSGSFSVFTRLKQKFYRMWLLAVQKWPNILPYAREMLQLVL----RTNLMFFYFEGLYYHISKRAAGIRYMFIGKPLNQRPRYQLLGVFLLIQLCIITAEGLRRSNLSSIASSVHQSSLGSHQASGARGLPVLNEEGNLITTNTSLDRGNWASDQTSLSETQGVG-------------GISKCTLCLSTRQHPTATTCGHVFCWNCIMEWCNEKPECPLCRTPVTHSSLICI 398          
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Match: UPI001CB9C82D (peroxisome biogenesis factor 10 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9C82D)

HSP 1 Score: 155 bits (393), Expect = 1.030e-38
Identity = 124/404 (30.69%), Postives = 191/404 (47.28%), Query Frame = 2
Query:  158 FPFATQPDVVLSMERDTYYAHTLLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEYCDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRLKEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSPLAVPSTEG--TRNPLTAM--------IH-VRRW---VRRQRRSVAAVLDWLQRLHLTFFYFNGRYQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQISASLRSHVGGASGEQGQVSVD-GEDALVRTSKFLCGYLCVDNAIKAKVPATGPQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNPECPLCRQPVQPQAIVCL 1324
            FP A QP+++ + ++D  YA + + E+  +    L G+R +     E K+L   LYY LT  +G+QTLG+EYCD+  V  ++    G+            +PA   L+ V    +PY   R+                RI  ++R ++++ ++  D  ++  R    D  S + VPS     + +PL+ +        +H V+RW   +   R S+  +L    R +L FFYF G Y   + RA G R ++       R +Y ILG+FLLVQ+   AA  ++R   AS+ S V   S    Q S   G   L      + G       +   VP +  Q          S   +C+LC++ R+  +ATPCGH+FCW CI+ WC   PECPLCR P+    +VCL
Sbjct:   30 FPLAAQPEIMRAAQKDDQYA-SFVYEACRDAFRHLFGTRAAISYQSETKLLGQMLYYILTTGAGQQTLGEEYCDITQVAGSY----GLPP----------TPARRALFIVYQSAVPYIAERVSS--------------RI--ASRGMALTESMSDD--LDTFRSSSEDQLSMIHVPSPSPRVSISPLSRLKEKIGGIWLHIVQRWPAVLPLARESLQLLL----RANLMFFYFEGLYYHISKRAAGIRYVFIGKPMNQRPRYQILGMFLLVQLCIIAAEGLRRSNLASITSSVQHTSLRVHQASGGRGLPVLNEEGNLITGDTGKGFGVSEAVPTSESQS---------SGISKCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPLTHSTLVCL 387          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7272.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU68_9PHAE5.370e-9643.65RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CLL0_9STRA3.600e-6434.55Peroxisome biogenesis factor 10 n=1 Tax=Tribonema ... [more]
A0A1W0A079_9STRA9.410e-4531.94Peroxisome assembly protein n=1 Tax=Thraustotheca ... [more]
A0A2C9W794_MANES1.890e-4029.73RING-type domain-containing protein n=2 Tax=Maniho... [more]
A0A218XUA6_PUNGR2.560e-4030.69RING-type domain-containing protein n=2 Tax=Punica... [more]
A0A7C8Z6D7_OPUST2.220e-3928.31RING-type domain-containing protein n=2 Tax=Opunti... [more]
A0A7J7C4U2_TRIWF6.760e-3929.87Peroxisome biogenesis factor 10 -like protein n=3 ... [more]
A0A4Y7IV86_PAPSO7.930e-3930.15RING-type domain-containing protein n=2 Tax=Papave... [more]
A0A2G5DYM0_AQUCA9.350e-3929.46RING-type domain-containing protein n=5 Tax=Thalic... [more]
UPI001CB9C82D1.030e-3830.69peroxisome biogenesis factor 10 n=1 Tax=Erigeron c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7272contigC-tenellus_contig7272:2942..4820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LAW2
Preferred namePEX10
PFAMsPex2_Pex12,zf-C3HC4_2,zf-C3HC4_3,zf-RING_2
Model size1643
Max annot lvl2759|Eukaryota
KEGG koko:K13346
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0000209,GO:0000280,GO:0000910,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005829,GO:0006082,GO:0006464,GO:0006513,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007049,GO:0007112,GO:0007140,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007285,GO:0007286,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009062,GO:0009790,GO:0009791,GO:0009793,GO:0009853,GO:0009987,GO:0010154,GO:0010381,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016049,GO:0016054,GO:0016558,GO:0016567,GO:0016740,GO:0017038,GO:0019395,GO:0019538,GO:0019752,GO:0019787,GO:0019953,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033036,GO:0033206,GO:0033365,GO:0034440,GO:0034613,GO:0036211,GO:0040007,GO:0042579,GO:0042760,GO:0042886,GO:0043094,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0048137,GO:0048232,GO:0048285,GO:0048316,GO:0048468,GO:0048515,GO:0048588,GO:0048589,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0055114,GO:0061458,GO:0061640,GO:0065002,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:0140013,GO:0140056,GO:0140096,GO:1901564,GO:1901575,GO:1903046,GO:1990351,GO:1990415,GO:1990429
Exons3
Evalue1.23e-98
EggNOG OGsCOG5574@1|root,KOG0317@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-27_006210.1
Descriptionperoxisome-chloroplast membrane tethering
Cds size1266
COG categoryO
BRITEko00000,ko00001,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790024.9227748-UTR-C-tenellus_contig7272:2941..32451680790024.9227748-UTR-C-tenellus_contig7272:2941..3245Choristocarpus tenellus KU2346UTRC-tenellus_contig7272 2942..3245 -
1680790024.9713962-UTR-C-tenellus_contig7272:4747..48201680790024.9713962-UTR-C-tenellus_contig7272:4747..4820Choristocarpus tenellus KU2346UTRC-tenellus_contig7272 4748..4820 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790024.9356935-CDS-C-tenellus_contig7272:3245..34881680790024.9356935-CDS-C-tenellus_contig7272:3245..3488Choristocarpus tenellus KU2346CDSC-tenellus_contig7272 3246..3488 -
1680790024.9495587-CDS-C-tenellus_contig7272:3604..43531680790024.9495587-CDS-C-tenellus_contig7272:3604..4353Choristocarpus tenellus KU2346CDSC-tenellus_contig7272 3605..4353 -
1680790024.9590657-CDS-C-tenellus_contig7272:4473..47471680790024.9590657-CDS-C-tenellus_contig7272:4473..4747Choristocarpus tenellus KU2346CDSC-tenellus_contig7272 4474..4747 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7272.2.1prot_C-tenellus_contig7272.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7272 3246..4747 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7272.2.1

>prot_C-tenellus_contig7272.2.1 ID=prot_C-tenellus_contig7272.2.1|Name=mRNA_C-tenellus_contig7272.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=422bp
MTARGSGGNVSSLTRERSRSASNRPPSSFPFATQPDVVLSMERDTYYAHT
LLGESVSELLEGLIGSRRSSLLGPEIKMLAAGLYYGLTKFSGKQTLGQEY
CDVLLVGTNWKSRSGVRDAIEDKTLVLLSPASMKLYTVLHVVIPYFQGRL
KEGWHGLRYLRDPFGRRITGSNRTVSMSNNVQGDPVVEGLRVRGRDATSP
LAVPSTEGTRNPLTAMIHVRRWVRRQRRSVAAVLDWLQRLHLTFFYFNGR
YQSFAMRALGARLMYNRAQDEPRAKYTILGLFLLVQVAAEAATAIQRQIS
ASLRSHVGGASGEQGQVSVDGEDALVRTSKFLCGYLCVDNAIKAKVPATG
PQETPPDAVLFPSSHRRCSLCMAPREYASATPCGHLFCWECIVGWCQTNP
ECPLCRQPVQPQAIVCLCQYA*
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mRNA from alignment at C-tenellus_contig7272:2942..4820-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7272.2.1 ID=mRNA_C-tenellus_contig7272.2.1|Name=mRNA_C-tenellus_contig7272.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1879bp|location=Sequence derived from alignment at C-tenellus_contig7272:2942..4820- (Choristocarpus tenellus KU2346)
TGCACGGACAGAGGTGTAAGACCAACGGTAGACCCAACACCAGACCAACC TTTGGAAGAAAAAATCGAAGGAAATGACTGCCAGGGGTAGTGGTGGAAAC GTTTCATCCTTAACGAGGGAGAGGTCAAGAAGTGCATCTAATCGTCCTCC GTCAAGCTTTCCTTTCGCCACGCAACCCGATGTGGTTCTTTCAATGGAAA GAGATACGTATTACGCTCACACATTGTTAGGAGAAAGTGTGTCCGAACTC TTGGAAGGGTTGATAGGTTCAAGGAGGTCTTCGCTCTTAGGTCCCGAAAT CAAAATGTTGGCTGCAGGGTTGTACTATGGGCTGACTAAATTTTCAGGTG GGTTTTGGTAAAGGAACGCTTGGGGCAGTGAAGGTGCATCTTGCAAGTGA CCATTCTCCTGTCGCAATACAAAGCCCAAAACGGCTATCCTTCAATCGTA TCGAAAAACGTCCTCAGGCAAACAAACGCTTGGGCAGGAATATTGTGATG TGCTGCTGGTCGGCACAAATTGGAAATCCAGGAGTGGAGTTCGGGATGCG ATAGAGGATAAGACACTAGTGTTGCTATCTCCAGCCTCAATGAAACTTTA CACAGTTTTACACGTTGTCATTCCCTACTTTCAGGGTCGTTTAAAAGAGG GATGGCATGGTCTCCGATATTTGCGTGACCCTTTCGGAAGACGCATTACG GGGTCAAATCGGACTGTGAGCATGAGCAACAACGTTCAAGGAGACCCTGT TGTAGAGGGGTTAAGGGTGAGGGGGAGAGATGCAACTTCGCCACTTGCAG TGCCATCTACAGAAGGTACAAGGAATCCACTGACGGCGATGATACATGTC CGACGATGGGTTCGACGACAGCGTCGTTCGGTCGCGGCTGTGCTAGATTG GCTCCAGCGCCTACACCTTACTTTTTTCTACTTCAACGGGCGATATCAGA GTTTTGCCATGAGAGCTCTCGGAGCTCGTCTCATGTACAATCGTGCACAG GACGAGCCCCGGGCGAAGTACACTATCCTAGGATTGTTCTTGCTGGTACA GGTGGCTGCCGAAGCCGCTACGGCTATACAACGACAGATATCTGCAAGCC TTCGTAGTCATGTGGGGGGAGCCAGTGGGGAGCAAGGGCAGGTTTCAGTG GATGGAGAGGATGCGTTGGTGAGAACATCAAAATTCTTGTGTGGTTATTT GTGTGTTGATAACGCCGTTTACTTTTTAGTGGTCAAGAATATACTTGTCT GCATTGATACCATCTAACCAGCTCAACTGTGCCTTTTCTCCCCTCCACCT TCGTACACGCTTTGGGAATCAAAATGTCTCAGATCAAGGCTAAAGTACCT GCAACTGGCCCTCAAGAGACCCCCCCAGATGCAGTCCTATTTCCAAGCTC GCACAGGCGATGCTCACTGTGCATGGCCCCAAGGGAATACGCCTCGGCTA CTCCATGTGGGCACCTTTTTTGCTGGGAGTGTATCGTTGGATGGTGCCAG ACCAACCCTGAATGCCCGCTATGCAGGCAACCAGTTCAACCACAAGCAAT TGTCTGCCTGTGCCAGTATGCCTGATACCTAACACCCCCTCCTCAAGATC CCTTTCATAGTATAGCTTCAATGTGGTGGAGGAAGTTTGTGTGTGAGGAT GCAAAGGACTCGAGGAGGTGGGCACTTACGACACCGTTTCTCGTGGGAAT TATTATTATTATTATTATTTTATTCTTCGGGTACTAACTGAGTCAATCCA GCCGTTCTGCCCCATAGTTTCAAACGTGGGGTGCGTTCTCTCAACCACGC ATGTTGTTGTTGTGAGCAAGATTGGTGGTCCCTTTACCATGTGGAGTCTG TAAGCACAGGAGCTCTGTGTTCAAGGTGT
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Coding sequence (CDS) from alignment at C-tenellus_contig7272:2942..4820-

>mRNA_C-tenellus_contig7272.2.1 ID=mRNA_C-tenellus_contig7272.2.1|Name=mRNA_C-tenellus_contig7272.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1266bp|location=Sequence derived from alignment at C-tenellus_contig7272:2942..4820- (Choristocarpus tenellus KU2346)
ATGACTGCCAGGGGTAGTGGTGGAAACGTTTCATCCTTAACGAGGGAGAG
GTCAAGAAGTGCATCTAATCGTCCTCCGTCAAGCTTTCCTTTCGCCACGC
AACCCGATGTGGTTCTTTCAATGGAAAGAGATACGTATTACGCTCACACA
TTGTTAGGAGAAAGTGTGTCCGAACTCTTGGAAGGGTTGATAGGTTCAAG
GAGGTCTTCGCTCTTAGGTCCCGAAATCAAAATGTTGGCTGCAGGGTTGT
ACTATGGGCTGACTAAATTTTCAGGCAAACAAACGCTTGGGCAGGAATAT
TGTGATGTGCTGCTGGTCGGCACAAATTGGAAATCCAGGAGTGGAGTTCG
GGATGCGATAGAGGATAAGACACTAGTGTTGCTATCTCCAGCCTCAATGA
AACTTTACACAGTTTTACACGTTGTCATTCCCTACTTTCAGGGTCGTTTA
AAAGAGGGATGGCATGGTCTCCGATATTTGCGTGACCCTTTCGGAAGACG
CATTACGGGGTCAAATCGGACTGTGAGCATGAGCAACAACGTTCAAGGAG
ACCCTGTTGTAGAGGGGTTAAGGGTGAGGGGGAGAGATGCAACTTCGCCA
CTTGCAGTGCCATCTACAGAAGGTACAAGGAATCCACTGACGGCGATGAT
ACATGTCCGACGATGGGTTCGACGACAGCGTCGTTCGGTCGCGGCTGTGC
TAGATTGGCTCCAGCGCCTACACCTTACTTTTTTCTACTTCAACGGGCGA
TATCAGAGTTTTGCCATGAGAGCTCTCGGAGCTCGTCTCATGTACAATCG
TGCACAGGACGAGCCCCGGGCGAAGTACACTATCCTAGGATTGTTCTTGC
TGGTACAGGTGGCTGCCGAAGCCGCTACGGCTATACAACGACAGATATCT
GCAAGCCTTCGTAGTCATGTGGGGGGAGCCAGTGGGGAGCAAGGGCAGGT
TTCAGTGGATGGAGAGGATGCGTTGGTGAGAACATCAAAATTCTTGTGTG
GTTATTTGTGTGTTGATAACGCCATCAAGGCTAAAGTACCTGCAACTGGC
CCTCAAGAGACCCCCCCAGATGCAGTCCTATTTCCAAGCTCGCACAGGCG
ATGCTCACTGTGCATGGCCCCAAGGGAATACGCCTCGGCTACTCCATGTG
GGCACCTTTTTTGCTGGGAGTGTATCGTTGGATGGTGCCAGACCAACCCT
GAATGCCCGCTATGCAGGCAACCAGTTCAACCACAAGCAATTGTCTGCCT
GTGCCAGTATGCCTGA
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