mRNA_C-tenellus_contig7143.5.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7143.5.1
Unique NamemRNA_C-tenellus_contig7143.5.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.410e-47
Identity = 108/183 (59.02%), Postives = 125/183 (68.31%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV L YLD V + DT R+FSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRP ILESEIKV      C   D + VK+ +   +   V +  ++      VL+E  E  ++  V   FV         K +  IG C+++
Sbjct:  178 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVNSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV----FFCKYNDPIYVKMEKLETIIRLVNDRNID-----QVLLELKEYAQEVDV--EFVR--------KAVRAIGRCAIK 341
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.530e-46
Identity = 105/183 (57.38%), Postives = 124/183 (67.76%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKY P D  EAEGIIERVTPRLQHANSAVVMSAVKV L+YLD +TN DT R FSRKLAPPLVTLLNSEPE QYVALRNINLIVQKRP+ILE EIKV      C   D + VK+ +   +   V++  +E      VL+E  E  ++  V   FV         + +  IG C+++
Sbjct:  228 QVFILDSLAKYDPVDGVEAEGIIERVTPRLQHANSAVVMSAVKVILSYLDLITNKDTERVFSRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPKILEHEIKV----FFCKYNDPIYVKMEKLEIIIRLVSDRNIE-----QVLLELKEYAQEVDV--EFVR--------RSVRAIGRCAIK 391
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S1VQ66_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ66_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.400e-44
Identity = 103/183 (56.28%), Postives = 122/183 (66.67%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKYTP D REAEGIIERVTPRLQHAN+AVVMSAVKV L Y+D + N+D +R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV      C   D + VK+ +   +    AE  ++      VL+E  E   +  V   FV         K +  IG C+V+
Sbjct:  229 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANAAVVMSAVKVILNYMDALQNSDAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKV----FFCKYNDPIYVKMEKLEIIIKLCAEKNID-----QVLLELKEYATEVDV--DFVR--------KAVSSIGRCAVK 392
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S2H873_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H873_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.800e-44
Identity = 103/187 (55.08%), Postives = 123/187 (65.78%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHV----TNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV LAY++ +     N D +R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EI+V      C   D + VK+ +   +   V+E  ++      VL+E  E   +  V   FV         K +  IG C+V+
Sbjct:  230 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGSSGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRV----FFCKYNDPIYVKMEKLEIIIKLVSEKNID-----KVLLELKEYATEVDV--DFVR--------KSVSAIGRCAVK 397
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S3PZD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD9_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.770e-44
Identity = 104/185 (56.22%), Postives = 127/185 (68.65%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHV--TNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV L+Y++ +  +N+DT+R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV      C   D + VK+ +   +   V+E  ++      VL+E  E   +  V   FV         K +  IG C+V+
Sbjct:  231 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGNSNSDTIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPTILENEIKV----FFCKYNDPIYVKMEKLEIIIKLVSEKNID-----QVLLELKEYATEVDV--DFVR--------KSVSAIGRCAVK 396
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S1FVF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVF1_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.220e-43
Identity = 102/183 (55.74%), Postives = 122/183 (66.67%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKY P D +EAEGIIERVTPRLQHANSAVVMSAVKV L+Y++ V N DT+R  +RKLAPPLVTLLNSE E QYVALRNINLIVQKRP ILE+EIKV      C   D + VK+ +   +   V+E  ++      VL+E  E   +  V   FV         K +  IG C+V+
Sbjct:  216 QVFILDSLAKYAPRDGQEAEGIIERVTPRLQHANSAVVMSAVKVILSYMELVANQDTIRNLTRKLAPPLVTLLNSEAEIQYVALRNINLIVQKRPHILENEIKV----FFCKYNDPIYVKMEKLEIIIKLVSERNID-----QVLLELKEYSTEVDV--DFVR--------KSVSAIGRCAVK 379
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A6U3VDL9_9STRA (AP complex subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VDL9_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.690e-43
Identity = 103/185 (55.68%), Postives = 123/185 (66.49%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHV--TNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV LAY++ +   N D +R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EI+V      C   D + VK+ +   +   V+E  ++      VL+E  E   +  V   FV         K +  IG C+V+
Sbjct:  229 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRV----FFCKYNDPIYVKMEKLEIIIKLVSERNID-----KVLLELKEYATEVDV--DFVR--------KSVSAIGRCAVK 394
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A1Z5K9X8_FISSO (AP-1 complex subunit beta-1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9X8_FISSO)

HSP 1 Score: 163 bits (412), Expect = 3.100e-43
Identity = 103/185 (55.68%), Postives = 124/185 (67.03%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHV--TNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV L+Y++ +   N+D +R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV      C   D + VK+ +   +   V+E  ++      VL+E  E   +  V   FV         K +  IG C+V+
Sbjct:  204 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSQNSDAIRALTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKV----FFCKYNDPIYVKMEKLEIIIKLVSEKNID-----QVLLELKEYATEVDV--DFVR--------KAVSAIGRCAVK 369
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S3LFQ5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFQ5_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.390e-43
Identity = 103/185 (55.68%), Postives = 124/185 (67.03%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHV--TNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV L+Y++ +   N+D++R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV      C   D + VK+ +   +   V E  ++      VL+E  E   +  V   FV         K +  IG C+V+
Sbjct:  221 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSANSDSIRHLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPHILENEIKV----FFCKYNDPIYVKMEKLEIIIKLVTEKNID-----QVLLELKEYATEVDV--DFVR--------KAVSAIGRCAVK 386
[Close]
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S2WFD7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.630e-43
Identity = 100/183 (54.64%), Postives = 123/183 (67.21%), Query Frame = 1 
Query:    1 QVYILDSLAKYTPTDSREAEGIIERVTPRLQHANSAVVMSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKVE*EGCVCVCVDALVVKLVESYWVE*DVAEWGVE*GRGEGVLVEGVEMREDCTVLCRFVHGQWEGEGEKRIEMIGVCSVR 549
            QV+ILD+LAKYTP + +EAEGIIERVTPRLQHANSAVVMSAVK+ L+Y+D +T+ DTVR  SRKLAPPLVTLLNSE E Q+VALRNINLIVQKRP+ILE EIKV      C   D + VK+ +   +   V E  +E      VL+E  E   +  V   FV         + +  IG C+++
Sbjct:  230 QVFILDALAKYTPANGQEAEGIIERVTPRLQHANSAVVMSAVKIVLSYMDLITSEDTVRQLSRKLAPPLVTLLNSEAEIQFVALRNINLIVQKRPQILEHEIKV----FFCKYNDPIYVKMEKLEIIIRLVNERNIE-----QVLLEFKEYATEVDV--DFVR--------RSVRAIGRCAIK 393
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J742_9PHAE1.410e-4759.02B2-adapt-app_C domain-containing protein n=2 Tax=E... [more]
A0A836CH70_9STRA3.530e-4657.38Coatomer protein complex, beta sub-unit n=1 Tax=Tr... [more]
A0A7S1VQ66_9STRA1.400e-4456.28Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S2H873_9STRA1.800e-4455.08Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S3PZD9_9STRA3.770e-4456.22Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1FVF1_9STRA1.220e-4355.74Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A6U3VDL9_9STRA2.690e-4355.68AP complex subunit beta n=1 Tax=Ditylum brightwell... [more]
A0A1Z5K9X8_FISSO3.100e-4355.68AP-1 complex subunit beta-1 n=2 Tax=Fistulifera so... [more]
A0A7S3LFQ5_9STRA4.390e-4355.68Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2WFD7_9STRA4.630e-4354.64Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7143contigC-tenellus_contig7143:4981..5906 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LDW2
PFAMsAdaptin_N,Alpha_adaptinC2,B2-adapt-app_C
Model size549
Max annot lvl2759|Eukaryota
KEGG koko:K11825,ko:K12392
KEGG Pathwayko04142,ko04144,ko04721,ko04961,ko05016,map04142,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000278,GO:0000281,GO:0000910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005798,GO:0005886,GO:0005905,GO:0005911,GO:0006950,GO:0006970,GO:0006971,GO:0006996,GO:0007033,GO:0007049,GO:0007154,GO:0008150,GO:0009267,GO:0009506,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0012505,GO:0012506,GO:0012510,GO:0016020,GO:0016043,GO:0016050,GO:0022402,GO:0030054,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030121,GO:0030122,GO:0030125,GO:0030128,GO:0030130,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030587,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0031090,GO:0031152,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032502,GO:0032991,GO:0033298,GO:0033554,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044764,GO:0045334,GO:0048475,GO:0048856,GO:0050896,GO:0051301,GO:0051703,GO:0051704,GO:0051716,GO:0055044,GO:0061640,GO:0071496,GO:0071840,GO:0071944,GO:0090702,GO:0097708,GO:0098588,GO:0098630,GO:0098743,GO:0098796,GO:0098797,GO:0098805,GO:0099120,GO:1903047
Exons2
Evalue6.78e-27
EggNOG OGsCOG5096@1|root,KOG1061@2759|Eukaryota
Descriptionclathrin binding
Cds size204
COG categoryU
BRITEko00000,ko00001,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790015.9412963-UTR-C-tenellus_contig7143:4980..52111680790015.9412963-UTR-C-tenellus_contig7143:4980..5211Choristocarpus tenellus KU2346UTRC-tenellus_contig7143 4981..5211 -
1680790015.977269-UTR-C-tenellus_contig7143:5792..59061680790015.977269-UTR-C-tenellus_contig7143:5792..5906Choristocarpus tenellus KU2346UTRC-tenellus_contig7143 5793..5906 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790015.9557474-CDS-C-tenellus_contig7143:5211..54001680790015.9557474-CDS-C-tenellus_contig7143:5211..5400Choristocarpus tenellus KU2346CDSC-tenellus_contig7143 5212..5400 -
1680790015.9660382-CDS-C-tenellus_contig7143:5777..57921680790015.9660382-CDS-C-tenellus_contig7143:5777..5792Choristocarpus tenellus KU2346CDSC-tenellus_contig7143 5778..5792 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7143.5.1prot_C-tenellus_contig7143.5.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7143 5212..5792 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7143.5.1

>prot_C-tenellus_contig7143.5.1 ID=prot_C-tenellus_contig7143.5.1|Name=mRNA_C-tenellus_contig7143.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=68bp
MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNIN
LIVQKRPRILESEIKVE*
back to top

mRNA from alignment at C-tenellus_contig7143:4981..5906-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7143.5.1 ID=mRNA_C-tenellus_contig7143.5.1|Name=mRNA_C-tenellus_contig7143.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=926bp|location=Sequence derived from alignment at C-tenellus_contig7143:4981..5906- (Choristocarpus tenellus KU2346)
CAGGTGTATATCCTAGATTCCTTGGCCAAGTATACACCCACAGACAGTCG
GGAGGCGGAGGGGATCATTGAACGTGTCACGCCACGACTTCAGCATGCCA
ACTCTGCTGTGGTGATGTCTGCAGTGAAGGTGATCTCTGTCCCTTACGGC
CCTTCGATGAGGGGGTTGCTGTCCACCCCTCCTGCCCCTCCGCATTTGCT
TGCTTGGCTTGTGACTATTTGAGGCATGAGATTATTGTGACGCACGCTTG
GAGTAGAACCAACACTCTGATACTCTGTGGAGGAGAAAAGACAAAATGCG
ATGCCTGACCCTGACCCTGACCCCACCCACCCTTTCCAGTATTTCCTAAT
TTTTTTTGTTAAGTCAACTCATGTAATCTCCGACCCTTCTACCCCCTTTC
CCCTGTCAACACTGAACTAACCCCGTTGGTGTCACCCTGTTCTACACCCA
CACCCACACTTGTCGCCCCTTGGTGCCTCTGCATGTTCCATTGTTCCATT
GTTAAGGTAACCCTGGCGTACCTGGACCATGTGACTAACAATGATACTGT
TCGCACGTTCAGCCGCAAGCTGGCTCCTCCACTGGTCACATTGCTGAACT
CTGAGCCGGAAACTCAGTATGTAGCTCTCCGAAACATCAACCTGATTGTG
CAGAAGAGGCCGCGCATCCTTGAGTCAGAGATCAAGGTTGAATAAGAGGG
CTGTGTGTGTGTGTGTGTGGACGCTTTAGTTGTGAAATTAGTAGAGAGTT
ACTGGGTTGAGTGAGATGTGGCTGAGTGGGGCGTGGAGTGAGGGCGAGGG
GAAGGTGTGCTGGTTGAGGGGGTGGAAATGAGAGAGGACTGTACTGTTTT
ATGTAGGTTTGTGCATGGCCAGTGGGAGGGGGAGGGGGAGAAGCGGATTG
AGATGATAGGTGTTTGTTCAGTGAGG
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig7143:4981..5906-

>mRNA_C-tenellus_contig7143.5.1 ID=mRNA_C-tenellus_contig7143.5.1|Name=mRNA_C-tenellus_contig7143.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=204bp|location=Sequence derived from alignment at C-tenellus_contig7143:4981..5906- (Choristocarpus tenellus KU2346)
ATGTCTGCAGTGAAGGTAACCCTGGCGTACCTGGACCATGTGACTAACAA
TGATACTGTTCGCACGTTCAGCCGCAAGCTGGCTCCTCCACTGGTCACAT
TGCTGAACTCTGAGCCGGAAACTCAGTATGTAGCTCTCCGAAACATCAAC
CTGATTGTGCAGAAGAGGCCGCGCATCCTTGAGTCAGAGATCAAGGTTGA
ATAA
back to top