prot_C-tenellus_contig7143.5.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7143.5.1
Unique Nameprot_C-tenellus_contig7143.5.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length68
Homology
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S2B2D9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2D9_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.690e-27
Identity = 53/66 (80.30%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            +SAVKV L+YLD ++N DTVR   RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP+ILE EIKV
Sbjct:   11 LSAVKVVLSYLDLISNQDTVRQLCRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPQILEHEIKV 76          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.050e-25
Identity = 56/66 (84.85%), Postives = 59/66 (89.39%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            MSAVKV L+YLD +TN DT R FSRKLAPPLVTLLNSEPE QYVALRNINLIVQKRP+ILE EIKV
Sbjct:  266 MSAVKVILSYLDLITNKDTERVFSRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPKILEHEIKV 331          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.960e-25
Identity = 57/66 (86.36%), Postives = 59/66 (89.39%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            MSAVKV L YLD V + DT R+FSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRP ILESEIKV
Sbjct:  216 MSAVKVVLTYLDSVNSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 281          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S1VQ66_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ66_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.300e-23
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            MSAVKV L Y+D + N+D +R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV
Sbjct:  267 MSAVKVILNYMDALQNSDAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKV 332          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S2WFD7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD7_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 7.250e-23
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            MSAVK+ L+Y+D +T+ DTVR  SRKLAPPLVTLLNSE E Q+VALRNINLIVQKRP+ILE EIKV
Sbjct:  268 MSAVKIVLSYMDLITSEDTVRQLSRKLAPPLVTLLNSEAEIQFVALRNINLIVQKRPQILEHEIKV 333          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S1FVF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVF1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 9.880e-23
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            MSAVKV L+Y++ V N DT+R  +RKLAPPLVTLLNSE E QYVALRNINLIVQKRP ILE+EIKV
Sbjct:  254 MSAVKVILSYMELVANQDTIRNLTRKLAPPLVTLLNSEAEIQYVALRNINLIVQKRPHILENEIKV 319          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A024TNP2_9STRA (B2-adapt-app_C domain-containing protein n=13 Tax=Aphanomyces TaxID=100860 RepID=A0A024TNP2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.690e-22
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            +SAVKV + +L+ VTN DT RT SRK+APPLVTLL++EPE QYVALRNINLIVQKRP IL SEIKV
Sbjct:  285 LSAVKVIMKFLEKVTNADTERTLSRKMAPPLVTLLSTEPEIQYVALRNINLIVQKRPNILSSEIKV 350          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S0ARH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ARH9_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.980e-22
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNN-----DTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            MSAVKV L+Y++ +  +     D++R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV
Sbjct:   22 MSAVKVILSYMEVMAGSGGASADSIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPSILENEIKV 92          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A6A5AWY7_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AWY7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.330e-22
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            +SAVKV + +L+ VTN DT RT SRK+APPLVTLL++EPE QYVALRNINLIVQKRP IL SEIKV
Sbjct:  316 LSAVKVIMKFLEKVTNADTERTLSRKMAPPLVTLLSTEPEIQYVALRNINLIVQKRPSILSSEIKV 381          
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Match: A0A7S3PZD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD9_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.740e-22
Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 0
Query:    1 MSAVKVTLAYLDHV--TNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPRILESEIKV 66
            MSAVKV L+Y++ +  +N+DT+R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV
Sbjct:  269 MSAVKVILSYMELMGNSNSDTIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPTILENEIKV 336          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7143.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2B2D9_9STRA5.690e-2780.30Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A836CH70_9STRA1.050e-2584.85Coatomer protein complex, beta sub-unit n=1 Tax=Tr... [more]
A0A6H5J742_9PHAE1.960e-2586.36B2-adapt-app_C domain-containing protein n=2 Tax=E... [more]
A0A7S1VQ66_9STRA5.300e-2377.27Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S2WFD7_9STRA7.250e-2377.27Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S1FVF1_9STRA9.880e-2377.27Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A024TNP2_9STRA4.690e-2275.76B2-adapt-app_C domain-containing protein n=13 Tax=... [more]
A0A7S0ARH9_9STRA4.980e-2269.01Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A6A5AWY7_9STRA6.330e-2275.76Adaptin_N domain-containing protein (Fragment) n=1... [more]
A0A7S3PZD9_9STRA8.740e-2275.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..66
e-value: 1.1E-12
score: 49.2
NoneNo IPR availablePANTHERPTHR11134:SF30BETA-ADAPTIN-LIKE PROTEIN Bcoord: 1..66
IPR026739AP complex subunit betaPANTHERPTHR11134ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBERcoord: 1..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7143contigC-tenellus_contig7143:5212..5792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7143.5.1mRNA_C-tenellus_contig7143.5.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7143 4981..5906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7143.5.1 ID=prot_C-tenellus_contig7143.5.1|Name=mRNA_C-tenellus_contig7143.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=68bp
MSAVKVTLAYLDHVTNNDTVRTFSRKLAPPLVTLLNSEPETQYVALRNIN
LIVQKRPRILESEIKVE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR026739AP_beta