mRNA_C-tenellus_contig7131.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: A0A6H5JML2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML2_9PHAE) HSP 1 Score: 289 bits (740), Expect = 3.040e-89 Identity = 134/184 (72.83%), Postives = 161/184 (87.50%), Query Frame = 1 Query: 1 QAGLAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSDESGEGGFKRSVKWFRKWLNEQGHDSKA 552 +AGLAML+SRMY +AP+EY+F P TW+LPAE+NEFR E FGP G S + FI+KPDAGCQG+GIFLTK+L SV+ L GKSVAQRYL NPLLIDGYKFDLRLYVL+T+V+P+R+F+F+DGLVRICTE +E P + NI+K MHLTNYSVNK +SNF+SD+ GE GFKRSVKWF+KWL+EQGHDS A Sbjct: 672 KAGLAMLMSRMYHEAPKEYKFFPETWVLPAEINEFREE-FGPKGTSKSTFIIKPDAGCQGKGIFLTKQLSSVAALQGKSVAQRYLTNPLLIDGYKFDLRLYVLVTSVNPMRIFLFEDGLVRICTEAYEAPTEININKTTMHLTNYSVNKTSSNFTSDDMGESGFKRSVKWFKKWLDEQGHDSAA 854
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: D7FXY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY6_ECTSI) HSP 1 Score: 294 bits (752), Expect = 6.670e-89 Identity = 136/184 (73.91%), Postives = 163/184 (88.59%), Query Frame = 1 Query: 1 QAGLAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSDESGEGGFKRSVKWFRKWLNEQGHDSKA 552 +AGLAML+SRMY +AP+EY+F P TW+LPAEMNEFR E FGP G S +IFI+KPDAGCQG+GIFLTK+L SV+ L GKSVAQRYL NPLLIDGYKFDLRLYVL+T+V+P+R+F+F+DGLVRICTE +E P ++NI+K MHLTNYSVNK +SNF+SD+ GE GFKRSVKWF+KWL+EQGHDS A Sbjct: 666 KAGLAMLMSRMYHEAPKEYKFFPETWVLPAEMNEFREE-FGPKGTSKSIFIIKPDAGCQGKGIFLTKQLSSVAALQGKSVAQRYLTNPLLIDGYKFDLRLYVLVTSVNPMRIFLFEDGLVRICTEAYEAPAESNINKTTMHLTNYSVNKTSSNFTSDDMGESGFKRSVKWFKKWLDEQGHDSAA 848
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: A0A7S1UJL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJL5_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.760e-59 Identity = 97/186 (52.15%), Postives = 128/186 (68.82%), Query Frame = 1 Query: 1 QAGLAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSDES--GEGGFKRSVKWFRKWLNEQGHDSKA 552 +A +A L +M R P EY F P+TW+LP E +F+ F G+S IFI+KPD+GCQGRGIFLT L+ V +L VAQ+Y+ PLLI+ YKFDLR+YVL+T+ PLR+++F DGLVR+ T+++ P KANI+ CMHLTNY+VNK N NF + GE G KRS+ WF +W+ E D KA Sbjct: 131 KARMAQNLEKMRRLFPSEYNFYPKTWVLPTEFGDFKTH-FDSHGKSRQIFIIKPDSGCQGRGIFLTSSLDQV-DLQESQVAQQYIRRPLLIEEYKFDLRIYVLMTSCKPLRIYLFRDGLVRLATQEYVKPSKANINDRCMHLTNYAVNKTNDNFQKADQAMGESGSKRSLAWFMRWIAETRGDKKA 314
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: F0YJJ4_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ4_AURAN) HSP 1 Score: 197 bits (500), Expect = 3.680e-59 Identity = 97/184 (52.72%), Postives = 131/184 (71.20%), Query Frame = 1 Query: 10 LAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSDES---GEGGFKRSVKWFRKWLNEQGHDSKA 552 LA L +M R+ P+EY F PRTW+LP E+ +FR + F GRS+ +IVKPD+GCQGRGIFLT+ ES+S L + VAQ Y+ P LIDGYKFDLRLYVL+T+ PLR+++F DGLVR+CTE++ P N+ CMHLTNY++NK N NF ++E+ G G KRS++WF ++ + +KA Sbjct: 43 LAQNLEKMRREFPKEYSFYPRTWVLPLELADFRAQ-FDSMGRSSRFYIVKPDSGCQGRGIFLTQAFESISPLE-QVVAQHYIRKPFLIDGYKFDLRLYVLMTSCKPLRMYLFHDGLVRLCTEEYLKPNAENVAMRCMHLTNYAINKHNENFQTNENAYAGNVGSKRSLRWFMDYIAAEKGQAKA 224
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: A0A482SKE0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKE0_9ARCH) HSP 1 Score: 195 bits (495), Expect = 1.380e-58 Identity = 98/183 (53.55%), Postives = 134/183 (73.22%), Query Frame = 1 Query: 22 LSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRS--NNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFS---SDESGEGGFKRSVKWFRKWLNEQGHDSKAS 555 L+RM R P+EY F PRTWILP+E+N+FR + F +G S N IFI+KPDAGCQGRGIFLT+ +++V + VAQ Y+ PLL+D YKFDLR+YV + V PLRL++F DGLVR+CTE++ P K N++++CMHLTNY+VNK N+NF+ S E + KRS++WF ++L D+KA+ Sbjct: 19 LNRMQRMFPKEYSFYPRTWILPSELNDFRTQ-FDSNGVSLNNKIFIIKPDAGCQGRGIFLTRTMDNVP-VTENVVAQVYIKKPLLLDNYKFDLRIYVYVAGVKPLRLYLFHDGLVRMCTEEYVKPTKQNLNQMCMHLTNYAVNKHNNNFAQPASIEDQDHSSKRSLQWFMQYLANNFGDAKAN 199
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: A0A6H5KPS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS6_9PHAE) HSP 1 Score: 194 bits (493), Expect = 9.930e-55 Identity = 98/182 (53.85%), Postives = 125/182 (68.68%), Query Frame = 1 Query: 10 LAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSDESGEGGFKRSVKWFRKWLN-EQGHDSKA 552 LA L RM R P EY F PRTW+LP E F+ E F SG+S FIVKPD+GCQGRGIFLT+ LE V E VAQ Y+ PLLI+G+KFDLRLYVL+T+V PLR++ F DGL R+CTE++ N+ + CMHLTNY+VNKG+ NF +++ + G KRS++W W+ E+G KA Sbjct: 73 LAQNLDRMRRTFPHEYSFYPRTWVLPVEWGTFKTE-FDTSGKSTRTFIVKPDSGCQGRGIFLTQNLERV-EATESQVAQLYVQRPLLIEGFKFDLRLYVLVTSVIPLRVYAFKDGLTRLCTEEYSRASSDNLGRRCMHLTNYAVNKGSDNFVANDQADLGSKRSLRWLLGWIAAERGGQEKA 252
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: D8LM22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM22_ECTSI) HSP 1 Score: 194 bits (494), Expect = 3.600e-54 Identity = 98/182 (53.85%), Postives = 125/182 (68.68%), Query Frame = 1 Query: 10 LAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSDESGEGGFKRSVKWFRKWLN-EQGHDSKA 552 LA L RM R P EY F PRTW+LP E F+ E F SG+S FIVKPD+GCQGRGIFLT+ LE V E VAQ Y+ PLLI+G+KFDLRLYVL+T+V PLR+++F DGL R CTE++ N+ + CMHLTNY+VNKG+ NF +++ + G KRS++W W+ E+G KA Sbjct: 106 LAQNLDRMRRTFPHEYSFYPRTWVLPVEWGAFKTE-FDASGKSTRTFIVKPDSGCQGRGIFLTQDLERV-EATESQVAQLYVQRPLLIEGFKFDLRLYVLVTSVIPLRVYVFKDGLTRFCTEEYSRASSDNLGRRCMHLTNYAVNKGSDNFVANDQADLGSKRSLRWLLGWIAAERGGQEKA 285
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: A0A2R5G326_9STRA (Tubulin polyglutamylase ttll6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G326_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.290e-52 Identity = 89/181 (49.17%), Postives = 128/181 (70.72%), Query Frame = 1 Query: 1 QAGLAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSDESGEG---GFKRSVKWFRKWLNEQ 534 + GL L+++ + P ++ F P+TW+LP + +EF+ SG+ N FI+KPDA CQG+GIFLT+ E+V+ + VAQRYL PLLIDG+KFD+R+YV++T+VDPLR+F+F+DGLVRICT+K+ P N+ K MHLTNY++NK + +F +E+ G KRS++WF WL EQ Sbjct: 152 KGGLGKHLTQLAKLFPSDFSFFPQTWVLPQQWSEFKERI--ESGKGNRTFIIKPDASCQGKGIFLTRTHENVNPTESQ-VAQRYLHKPLLIDGFKFDMRIYVILTSVDPLRIFLFEDGLVRICTQKYVEPRGRNLQKSRMHLTNYAINKESEDFVFNEATSDPGTGNKRSLRWFWGWLEEQ 329
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: A0A835Z3E5_9STRA (Tubulin-tyrosine ligase/Tubulin polyglutamylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E5_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.520e-52 Identity = 88/187 (47.06%), Postives = 124/187 (66.31%), Query Frame = 1 Query: 1 QAGLAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSD---ESGEGGFKRSVKWFRKWLNEQGHDSKA 552 +A +A L RM R P +YRF PRTW+LP+E R E F +GRS IVKPDAGCQG+GI+LT++L+ V Q Y+ PLLIDGYKFDLR+YVL+T++ PLR++ F DGL R+CT + P AN+ CMHLTNY++N+ + NF ++ E + G KRS++W +W+ + +++A Sbjct: 35 KARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSE-FDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARA 220
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Match: A0A7S3ZQE5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQE5_9STRA) HSP 1 Score: 187 bits (474), Expect = 4.330e-52 Identity = 93/180 (51.67%), Postives = 129/180 (71.67%), Query Frame = 1 Query: 10 LAMLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDAGCQGRGIFLTKKLESVSELPGKSVAQRYLLNPLLIDGYKFDLRLYVLITNVDPLRLFIFDDGLVRICTEKFEVPCKANIDKLCMHLTNYSVNKGNSNFSSDES---GEGGFKRSVKWFRKWL-NEQG 537 LA L +M R +EY F PRTW+LP E+ +FR + F +GRS+ +I+KPD+GCQGRGIFLT+ ES+S L + VAQ Y+ P LIDG+KFDLRLYVL+T+ PLR+++F DGLVR+CT+K+ P N+ CMHLTNY++N+ + NF +E+ + G KRS++WF +L NE+G Sbjct: 98 LAQNLEKMRRGFQKEYNFYPRTWVLPLELADFRAQ-FDSNGRSSQFYIIKPDSGCQGRGIFLTQNFESISPLE-QVVAQHYIRKPFLIDGFKFDLRLYVLVTSCKPLRVYLFRDGLVRLCTQKYLKPNPGNVAMRCMHLTNYAINRHSENFQGNETLGACDIGSKRSLRWFMDFLANEKG 275 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7131.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7131.1.1 >prot_C-tenellus_contig7131.1.1 ID=prot_C-tenellus_contig7131.1.1|Name=mRNA_C-tenellus_contig7131.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=181bp MLLSRMYRQAPEEYRFVPRTWILPAEMNEFRREPFGPSGRSNNIFIVKPDback to top mRNA from alignment at C-tenellus_contig7131:166..4239+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7131.1.1 ID=mRNA_C-tenellus_contig7131.1.1|Name=mRNA_C-tenellus_contig7131.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4074bp|location=Sequence derived from alignment at C-tenellus_contig7131:166..4239+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7131:166..4239+ >mRNA_C-tenellus_contig7131.1.1 ID=mRNA_C-tenellus_contig7131.1.1|Name=mRNA_C-tenellus_contig7131.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=543bp|location=Sequence derived from alignment at C-tenellus_contig7131:166..4239+ (Choristocarpus tenellus KU2346)back to top |