mRNA_C-tenellus_contig7123.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7123.2.1
Unique NamemRNA_C-tenellus_contig7123.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: D7FQY5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY5_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 4.950e-94
Identity = 191/494 (38.66%), Postives = 278/494 (56.28%), Query Frame = 1
Query:    1 GGDLSFSRIPKLLSGCLHTCCQSCMEESLQRYRGVAEAPCPICGIIT-ETADTNDLVNNYVVLRGV-RARCLCDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLK--EVGERGIQSVLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHE--FTLLPQAEEKHR-GLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALDTAGLCLDQLHCDEFMATGPCIEQRMDALQQQAQSLQLEPCVDDHISFSCDKGILDCARHQISKLGSV-NSISAVKEAGSKVQEQEQVEGTK------LHFNLEASVGVHPRHVGFAVPTDKVVVEVRGGSEAEVLSGGKEGPLIGRVILVTQLEGAGQTSFQSEQLFESLSQASNMGSSS---------------SASNVSTSIPTVRFTKVLRV 1395
            GGDL+FS IPK+L GCLHT CQ+C EE LQR +  +   CP+CG+ T +   T+ L +N V L+ V R    CD CDD   A H C +C   LC FH+  H  SRGTKSH+V+ LK  E   R         + + C +H+   AKLFCS PC   ICH+CS+  H GH   F+   + E+ HR GL R+ V+    RLA ++  L +++  +  V+ + +  E   ++ FS +R A+D REK ++K L+     K + L+ Q+  L +V+ AY+ ALD+    L++LH D+F+A  P I + +DA + +  SL+L PCV+D + F  D+ I +  R  IS+LG V N++   K+       ++++  +       +HF+L A VG  P+    A PTDKV+VE+R GSE + L  G  GP+IGRV L T+ +GA   ++++E  FESLSQ +     S               + S     +P VRFTKVLRV
Sbjct:   27 GGDLTFSHIPKVLKGCLHTICQNCAEEGLQRSKDGSSIMCPLCGVSTSDVTSTSALQDNIVALQDVHRKNSHCDFCDDVAKASHVCHECASLLCTFHMTAHSVSRGTKSHRVVSLKNREASHR---------VQITCARHRDVEAKLFCSEPCGTTICHNCSVAEHSGHSVFFSDSAEVEQVHRAGLTRRGVSLGH-RLARVRGGLDAVEAVKTGVEKHTRLAESATVQAFSAIRAAVDSREKEILKNLRADRAQKTQDLNAQLAKLGQVMRAYEIALDSTNTSLERLHGDQFLAMEPTIRECLDAREAEFPSLELTPCVEDRVEFEHDRSIANALRQGISRLGCVVNAVRPRKKKEKSTAPEQELHASSTPSEHNIHFSLAAIVGARPQEATLASPTDKVIVEIRSGSEHDFLKSGTTGPVIGRVALHTKFKGAKHLAYETEHFFESLSQRATPTRQSRKQQHQAEKERQKQPTPSRDGDCVPAVRFTKVLRV 510          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: UPI00109B775A (uncharacterized protein LOC110244904 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B775A)

HSP 1 Score: 116 bits (291), Expect = 4.110e-23
Identity = 79/277 (28.52%), Postives = 138/277 (49.82%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCMEESLQRYRGVAEAPCPICGIITETADTNDL-----VNNYVVLRGV---------RARCLCDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQSVLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALD 816
            P++L  CLHT C+ C+   L++        CPIC +I++  D + L     VNN + L  +           + LC +C+    A  +C DCG  +C   +K H+     K+H+++ L+E+  +GI S+      + C +H+ E+ KLFC + C  LIC DC+++ HKGH+F   P   +  +G L+K      E    I+ +L+++ E +D V+ N +  ++ + RT       ++   + L +    +   K++ LS Q   LE  +AA    L+
Sbjct:   26 PRILP-CLHTYCRKCLFNLLEK----GSIQCPICRVISQVKDVSSLQVNIWVNNRLSLLELSKVEKXSSEEEQLLCGNCNLNQQATGKCFDCGTFMCDTCIKAHKLMAVLKNHQLLTLEEIKSKGIPSI---EKRILCGKHKDEQQKLFCEA-CETLICRDCTLIDHKGHQFGFXPDVIKGQKGNLQKKXQDLCETKKKIESALKAVXEMQDRVRKNEETLKKEIDRTIDAQIAVLNQIRRNLKQKSANLTATKMKRLSSQQDGLEMHLAALTNTLN 293          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: UPI001F03602A (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03602A)

HSP 1 Score: 112 bits (280), Expect = 7.120e-22
Identity = 89/348 (25.57%), Postives = 166/348 (47.70%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCMEESLQRYRGVAEAPCPIC--------GIITETADTNDLVNN---YVVLRGVRARCL-CDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQSVLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALDTAGLCLDQLHCDEFMATGPCIEQRMDALQQQAQSLQLEPCVDDHISFSCDKGILDCARHQISKLGSVNSISAV 1035
            PK+L  CLH+ CQ C+++  +   G A   CP C        G + E   TN  +NN   ++ ++   ++ + C +C D + A  RC DC   LC   L  H+R++ TK H+V+ LK++    +Q  +  H PLYC QH  E  K +C + C   +C +C I+ H+ H++  L     K R  +R  V  +  ++  +++++ ++    + V +  Q  ++ + + FS   + +  +E+ L+  +     +K + L  Q + LE ++++  ++   +   L+  +  E M     + +R+  LQ     ++ EP  DD I +       D  R  I   G + + S V
Sbjct:   26 PKILP-CLHSFCQKCLKKISKD--GEALILCPTCRNEINLPPGGVQELP-TNFFINNMLDFISIQSFASKPIDCTNCQDGIHAVARCGDCVEFLCEQCLAAHKRTKLTKDHEVLALKDMQTASVQEKM--HRPLYCSQHDREILKYYCKT-CDDPVCRECLIMEHREHDYGYLKDVSMKQRQQVRLLVENTNSQIGSLEKAISNVTRLIERVNAKRQGIQQEITKNFSKCVEVLKEKEEELLVFVDNECRIKCKNLGLQKENLETLLSSISSSCQFSENVLEHGNEAEVMLVKKQLTKRLGELQNT--HMEFEPLEDDSIEYEF---FTDEFRRAIQHAGHIRAFSTV 361          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: UPI001F032E23 (E3 ubiquitin-protein ligase TRIM33-like isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F032E23)

HSP 1 Score: 107 bits (268), Expect = 2.420e-20
Identity = 79/274 (28.83%), Postives = 136/274 (49.64%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCMEESLQRYRGV--------AEAPCPICG--IITETADTNDLVNNYVVLRGVR--------ARCLCDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQSVLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVA 795
            PKLL  CLH+ CQSC+E+ L+             A   CP CG   +        L++N  +L  V+        A   C SC+D   A   C++C   LC+  ++ H+R R TK H++   +E+ E  +++   S   LYC +H  E+ +LFC   C +L C DC +  HK H++  + +A  ++R   +K +   +E+LA + ES+ S+K +   ++   +     +  T +++  A+  RE  L+  L+ + + K + L +Q K L  + A
Sbjct:   39 PKLLP-CLHSFCQSCLEDRLRGNEPSTTSAVPCSARLKCPKCGQEFLVPARGVATLIDNQFILDIVKKPSRENESASHKCTSCEDDSDASSFCLNCSEWLCSACVQAHQRVRVTKDHEIKSGEELKE-SLRNNNRSERCLYCKKHPSEKLQLFCVK-CERLTCRDCQLHEHKHHQYQFVNEAAARYREFFKKKLICLEEKLAPLAESIDSVKNSTTHLELKSEAVVNDIKNTSNDIISAVRERESVLLNELQALVQFKRKLLLKQTKDLNLMQA 309          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: A0A8J1USH7_OWEFU (Ofus.G18670 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1USH7_OWEFU)

HSP 1 Score: 105 bits (263), Expect = 8.310e-20
Identity = 105/365 (28.77%), Postives = 169/365 (46.30%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCMEESLQRYRGVAEAPCPIC---GIIT----ETADTNDLVNNYV-------------VLRGVRARCLCDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQSVLP-----SHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILS-HKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIK-------ALEKVVAAYDTALDTAGLCLDQLHCDEFMATGPCIEQRMDALQQQAQSLQLEPCVDDHISFSCDKGILDCARHQISKLGSVNS 1023
            PK+L  CLH+ C+ C+E+   R  GV +  CP C    I+T    E   +N  +NN +             ++   R +  C SCD+   A   C DC   LC   ++ H+R R TK H + ++     +  Q + P        P YC  H+HE  +L+C S C K IC +C +L  H  H F  L  A E  + +  K +A ++  +  I+ES+       + V+   Q     V  T     QA++ RE+ L++ +++I +VKV++L  QI+       +L+  V   +T+L++ G  +D L   + M        +M  +++    LQ  P  DD+I F+     L  A   I +LG V S
Sbjct:   24 PKVLP-CLHSFCRRCLEDIFNRD-GVLQ--CPTCKQDAILTGSKIEGLPSNFFINNILDVVASHEEDLDSDIIGIKRPQPTCTSCDEGSNATSLCKDCNEYLCDNCVRAHQRVRLTKDHYITRIPSNSNQSTQMMSPIMPVSDRPPSYCELHEHEILRLYCDS-CTKAICRECMMLEEHSCHNFIYLQDAVENSKTVAVKLLADAKAGVRAIEESIMLANAMSERVEVRTQAVATEVRATTRRHMQALEERERELLRRVEKIRQVKVKSLHIQIEDLKEGFQSLQMTVNKVETSLES-GTDIDVLKTRDIMVA------QMQGMRKLRGHLQ--PHEDDNILFTPPDTALHAA---ICQLGYVAS 371          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: A0A7D9EPF6_PARCT (E3 ubiquitin- ligase TRIM71-like n=4 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9EPF6_PARCT)

HSP 1 Score: 103 bits (258), Expect = 3.500e-19
Identity = 82/322 (25.47%), Postives = 154/322 (47.83%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCMEESLQRYRGVAEAPCPIC--------GIITETADTNDLVNN---YVVLRGVRARCL-CDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQSVLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALDTAGLCLDQLHCDEFMATGPCIEQRMDALQQQAQSLQLEPCVDDHISF 957
            PK+L  CLH+ CQ C++  L+   G     CP C        G + E   TN  +NN   ++ ++   ++ + C +C D   A  RC DC   LC   L  H+R++ TK H+V+ LK++    +Q  +  H PLYC QH  E  K +C + C   +C +C I+ H+ H +  L     K R  ++  V  ++ +   ++++++ +    + +    +  ++ +   FS   + +  +E+ L+  +     +K + L  Q ++LE ++A+  ++   +   L+  +  E M     + QR++ LQ     +  EP  DD I +
Sbjct:   26 PKILP-CLHSFCQKCLQRILKE--GENAILCPTCRNEIQLPQGGVQELP-TNFFINNMLDFITVQSFSSKPIDCTNCQDHSHAVARCGDCVEFLCEQCLAAHKRTKLTKEHEVMALKDLQSSDVQDKM--HRPLYCSQHDREILKYYCET-CDDPVCRECLIMEHREHAYGYLKDVNNKQRQEVKSLVDSTKAQTVPLEKAIEDITTLMERLGVRSKGLQQEITSNFSKCTEVLKEKEEELLVFVSNECRIKCKNLGLQKESLETLLASVTSSCQFSENVLEHGNEAEVMLVKKQLTQRLNDLQNT--HMAFEPQEDDVIEY 338          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: A0A6J0H826_9PASS (tripartite motif-containing protein 45 n=24 Tax=Passeriformes TaxID=9126 RepID=A0A6J0H826_9PASS)

HSP 1 Score: 102 bits (254), Expect = 4.820e-19
Identity = 85/330 (25.76%), Postives = 142/330 (43.03%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCMEE--SLQRYRGVAEAP--CPICG--IITETADTNDLVNNYVVLRGVRARCLCDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQSVLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALDTAGLCLDQLHCDEFMATGPCIEQRMDALQQQAQSLQLEPCVDDHISFSCDKGILDCARHQI 999
            P+LL  CLH+ C  C+    +L+   G A  P  CP+C   +         L  + +      A   CD C D   A  RC+ CG+ LC F  + HRR + T SH V++L+   +        +  PL CP H  E  +LFC   C + +C +C +  H+ H +        +H   LRK +  +Q+ +  +++ L  + +   +V+S  +     +    S   +AI+     L+K L+ ++  K   L  Q   L++++    T ++     L      E + T   +  R+  L   A S    P VDD I FS  +    C  + +
Sbjct:   16 PRLLP-CLHSLCDPCLRRLGALEGEPGGAARPVLCPVCDAEVSLPPGGVGQLTPDCLAGSRAGAAAGCDLCADGAAA-GRCLTCGVRLCPFCCRAHRRQKKTASHAVMELENTKD-----CSQAGKPLLCPSHPTEELRLFCEQ-CDQPVCQECVLGRHRQHPYDFTSNVIHRHGDALRKLLKNTQQHMDTLEDVLSQIDKMGSAVRSRAEAVATEICLFASGYVRAIEEHRDRLLKQLEDLKVQKENLLHLQKAQLQQLLLDMRTGVEFTEHLLMSGSDLEILITKGVVSSRLTKLNSVAYSTH--PSVDDRIQFSAQERAGQCCGYAV 335          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: UPI000C6D29D8 (E3 ubiquitin-protein ligase TRIM71-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D29D8)

HSP 1 Score: 102 bits (253), Expect = 1.350e-18
Identity = 87/340 (25.59%), Postives = 151/340 (44.41%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCMEESLQRYRGVAEAP-----CPICG--IITETADTNDL--------VNNYVVL------RGVRARCLCDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQS--------VLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALDTAGLCLDQLHCDEFMATGPCIEQRMDALQQQAQSLQLEPCVDDHISFS 960
            PK+L  C HT C  C E+    Y G A++      CP C   ++    D   L        +N+ + +       G     +C SCDD   A  RCIDC  ALC   L  H+R R TK H + ++ + G +  ++         +    P+ C  H+     L+C   C + +C +C++ SH+GH  + L +     + L+       +    VI ES++  +   + +    Q   + +  T      A++ RE+ L++ +++I +VKV  +  QI  L+      +  +D     LD L   +F+        ++  ++QQ  +L L+PC DD+I F+
Sbjct:   26 PKVLP-CYHTICGRCYEQ----YAGSADSMTGSYRCPKCNESVLQTLGDEQSLDGLHPPFYINDILDVVKEDFENGYSNNNMCTSCDDGNTASARCIDCKEALCENCLMAHQRVRLTKDHNITRVDDTGIKYAETKYSPPSLPAINERKPVPCEFHKTSIICLYCEQ-CNEALCRECTMRSHRGHTVSYLEEILNACKKLISGKCKDLKMESHVIDESIEMAQRMSERIDLKIQAVSKEIRATIRRHMNALEERERELLRRVEKIRQVKVHTIQLQIDELKVYKTKMNNLIDYTEQSLDNLVDVDFIKLRDNFVSQVGEIKQQHHNL-LKPCEDDNILFT 358          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: H0ZT12_TAEGU (Uncharacterized protein n=19 Tax=Passeriformes TaxID=9126 RepID=H0ZT12_TAEGU)

HSP 1 Score: 99.8 bits (247), Expect = 3.520e-18
Identity = 88/334 (26.35%), Postives = 140/334 (41.92%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCMEESLQRYRGVAEAP--------CPICG--IITETADTNDLVNNYVVLRGVRARCLCDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQSVLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALDTAGLCLDQLHCDEFMATGPCIEQRMDALQQQAQSLQLEPCVDDHISFSCDKGILDCARHQI 999
            P+LL  CLH+ C+ C+     R  G  E P        CP+C   +         L  + +     RA   CD C D   A  RC+ CGL LC F  + HRR + T SH V +L+   +        +  PL CP H  E  +LFC   C + +C DC +  H+ H          +H   LR+ +  SQ+ +  +++ L  + E   +V+S  +     +        +AI+     L+K L+ ++  K   L  Q   L++++    T ++     L      E + T   +  R+  L   A S    P VDD I FS  +    C  +++
Sbjct:   16 PRLLP-CLHSLCEPCL-----RRLGPPEGPPGAARPVLCPVCDAELSLPAGGVGQLPPDCLAGSRGRAAAGCDLCADGAAA-GRCLTCGLRLCRFCCRAHRRQKKTASHAVTELENTKD-----CSQAGKPLLCPSHPTEELQLFCEQ-CDQPVCRDCVLGRHRQHPCDFTGNVIHRHGDALRELLKNSQQHMDTLEDVLSQVDEMGSAVRSRAEAVATEICLFARGYVKAIEEHRDRLLKQLEDLKVQKENLLHLQKAQLQQLLLDMRTGVEFTEHLLMSGSDVEILITKGVVSSRLTKLNSVAYSTH--PSVDDRIQFSPHERAGQCCGYEV 334          
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Match: A0A401NGH9_SCYTO (Uncharacterized protein n=2 Tax=Scyliorhinus TaxID=7829 RepID=A0A401NGH9_SCYTO)

HSP 1 Score: 99.4 bits (246), Expect = 5.970e-18
Identity = 79/295 (26.78%), Postives = 135/295 (45.76%), Query Frame = 1
Query:   28 PKLLSGCLHTCCQSCM----EESLQRYRGVAEAP---------------CPICG--IITETADTNDLVNNYVVLRGV------RARC--LCDSCDDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEV---GERGIQSVLPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAEEKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTFSNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALD 816
            PK+L  CLHT C  C+    + S+ R RG  E+                CP+C   +    A    L +N+++L  +      R+ C  +CD C+D   A  RC  C   LC F  K HRR + T SH  + L+++    ER +Q       P+ C  H  E  ++FC + C +L+C DC ++ H+GH    +     KH   +R+ + ++Q  +  +QE+LQ +      V+       + +        +A++     L+K L+ +   +  +L+ Q   LE+++A   T +D
Sbjct:   44 PKILP-CLHTFCLDCVRGLQQFSVPRTRGEGESGSGGSLDCTESAACILCPLCDYEVHVPAAGLRGLTSNHLILNDILLESLKRSDCRIVCDLCNDGD-AERRCHICSTNLCDFCSKAHRRQKMTASHNTVALRDLQGGNERLVQ-------PIICSAHPAEELRMFCET-CDRLVCRDCCMVDHRGHNCDFIASVISKHGIFIRELLKQTQPHIGALQETLQKIAHARQLVQERLGMMTKEINNFTDGYIRALENHRNQLLKELEELRAQRENSLNLQQIQLEQILADMRTGVD 328          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7123.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQY5_ECTSI4.950e-9438.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI00109B775A4.110e-2328.52uncharacterized protein LOC110244904 n=1 Tax=Exaip... [more]
UPI001F03602A7.120e-2225.57LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase T... [more]
UPI001F032E232.420e-2028.83E3 ubiquitin-protein ligase TRIM33-like isoform X1... [more]
A0A8J1USH7_OWEFU8.310e-2028.77Ofus.G18670 protein n=1 Tax=Owenia fusiformis TaxI... [more]
A0A7D9EPF6_PARCT3.500e-1925.47E3 ubiquitin- ligase TRIM71-like n=4 Tax=Alcyonace... [more]
A0A6J0H826_9PASS4.820e-1925.76tripartite motif-containing protein 45 n=24 Tax=Pa... [more]
UPI000C6D29D81.350e-1825.59E3 ubiquitin-protein ligase TRIM71-like n=1 Tax=Ce... [more]
H0ZT12_TAEGU3.520e-1826.35Uncharacterized protein n=19 Tax=Passeriformes Tax... [more]
A0A401NGH9_SCYTO5.970e-1826.78Uncharacterized protein n=2 Tax=Scyliorhinus TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7123contigC-tenellus_contig7123:3275..6911 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQY5
PFAMszf-B_box
Model size2300
Max annot lvl2759|Eukaryota
KEGG koko:K08883
Hectar predicted targeting categoryother localisation
Exons7
Evalue6.72e-83
EggNOG OGsKOG2177@1|root,KOG2177@2759|Eukaryota
Ec32 ortholog descriptionSecreted RING/FYVE/PHD-type and B-box zinc finger protein
Ec32 orthologEc-09_003280.1
EC2.3.2.27
Descriptionzinc ion binding
Cds size1335
COG categoryO
BRITEko00000,ko01000,ko01001,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7123.2.1prot_C-tenellus_contig7123.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7123 3482..6018 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790014.010525-UTR-C-tenellus_contig7123:3274..33401680790014.010525-UTR-C-tenellus_contig7123:3274..3340Choristocarpus tenellus KU2346UTRC-tenellus_contig7123 3275..3340 +
1680790014.025525-UTR-C-tenellus_contig7123:3475..34811680790014.025525-UTR-C-tenellus_contig7123:3475..3481Choristocarpus tenellus KU2346UTRC-tenellus_contig7123 3476..3481 +
1680790014.0986001-UTR-C-tenellus_contig7123:6018..69111680790014.0986001-UTR-C-tenellus_contig7123:6018..6911Choristocarpus tenellus KU2346UTRC-tenellus_contig7123 6019..6911 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790014.034506-CDS-C-tenellus_contig7123:3481..36161680790014.034506-CDS-C-tenellus_contig7123:3481..3616Choristocarpus tenellus KU2346CDSC-tenellus_contig7123 3482..3616 +
1680790014.0447736-CDS-C-tenellus_contig7123:3726..38461680790014.0447736-CDS-C-tenellus_contig7123:3726..3846Choristocarpus tenellus KU2346CDSC-tenellus_contig7123 3727..3846 +
1680790014.0552382-CDS-C-tenellus_contig7123:4015..42601680790014.0552382-CDS-C-tenellus_contig7123:4015..4260Choristocarpus tenellus KU2346CDSC-tenellus_contig7123 4016..4260 +
1680790014.0689683-CDS-C-tenellus_contig7123:4383..45311680790014.0689683-CDS-C-tenellus_contig7123:4383..4531Choristocarpus tenellus KU2346CDSC-tenellus_contig7123 4384..4531 +
1680790014.0786147-CDS-C-tenellus_contig7123:5197..53711680790014.0786147-CDS-C-tenellus_contig7123:5197..5371Choristocarpus tenellus KU2346CDSC-tenellus_contig7123 5198..5371 +
1680790014.0884728-CDS-C-tenellus_contig7123:5505..60181680790014.0884728-CDS-C-tenellus_contig7123:5505..6018Choristocarpus tenellus KU2346CDSC-tenellus_contig7123 5506..6018 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7123.2.1

>prot_C-tenellus_contig7123.2.1 ID=prot_C-tenellus_contig7123.2.1|Name=mRNA_C-tenellus_contig7123.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=445bp
MEESLQRYRGVAEAPCPICGIITETADTNDLVNNYVVLRGVRARCLCDSC
DDAVMACHRCIDCGLALCAFHLKDHRRSRGTKSHKVIKLKEVGERGIQSV
LPSHMPLYCPQHQHERAKLFCSSPCAKLICHDCSILSHKGHEFTLLPQAE
EKHRGLLRKHVARSQERLAVIQESLQSMKETEDSVKSNCQNTERMVLRTF
SNLRQAIDLREKTLVKALKRIEEVKVRALSRQIKALEKVVAAYDTALDTA
GLCLDQLHCDEFMATGPCIEQRMDALQQQAQSLQLEPCVDDHISFSCDKG
ILDCARHQISKLGSVNSISAVKEAGSKVQEQEQVEGTKLHFNLEASVGVH
PRHVGFAVPTDKVVVEVRGGSEAEVLSGGKEGPLIGRVILVTQLEGAGQT
SFQSEQLFESLSQASNMGSSSSASNVSTSIPTVRFTKVLRVAKG*
back to top

mRNA from alignment at C-tenellus_contig7123:3275..6911+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7123.2.1 ID=mRNA_C-tenellus_contig7123.2.1|Name=mRNA_C-tenellus_contig7123.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3637bp|location=Sequence derived from alignment at C-tenellus_contig7123:3275..6911+ (Choristocarpus tenellus KU2346)
GGTGGCGACCTATCCTTCTCTCGCATACCAAAGCTGCTATCAGGCTGTCT GCATACGTGCTGCCAGGTGACTCACGAAGAGATCGATATGCAACCAGCAT TTTCAAGTGCCTACCTTGTAGACGATTCAAGATAGAAGCAATTGTACCCT AAGTTATGCGTCGCCCTGTCGACTTTGATGCCTCATTCGCCATGATCACA GTCGTGCATGGAAGAATCCCTCCAAAGATACAGGGGAGTTGCCGAGGCGC CTTGCCCTATCTGTGGGATCATCACCGAGACTGCAGACACAAATGACCTT GTCAACAACTACGTGGTACTGCGAGGGGTCCGAGCACGGTGCGTTCAACT ATATTTGATGAAGAGGGGGGGGGTTTCCGTGTCTGACTCCAAGATTGAAC AAGATCATTTTATTGTTGCATGTTTTACAGGGATTGGTTCCTTCCGGATC AGCTTTGTGACTCCTGTGATGATGCTGTGATGGCTTGTCACCGCTGTATT GATTGTGGACTTGCCTTATGCGCCTTCCACTTGAAGGACCACCGACGCTC CCGTGGAACAAAGTCCCATAAGGTGGGATAGATAGTACTTTCTGTCCAGA AGGGTTCAAAAAATGTTCTGAGCATAACAATGTTAATTTCACATTGCAAC AAACACAAGTAAAAATCTACACTTCAGTTTTCACTCACGTTGGGCTCTGG GCAAAAACGAGTGGATGCTTAGTTGCCATGTACTTGTTCAGGTGATCAAG TTGAAAGAGGTGGGGGAACGTGGTATTCAAAGCGTATTGCCAAGCCACAT GCCCCTGTACTGCCCTCAACATCAACATGAGCGGGCAAAGCTCTTCTGCT CCTCGCCCTGCGCAAAACTAATTTGCCATGACTGCAGCATTCTCAGTCAC AAAGGGCATGAGTTCACACTATTGCCACAAGCAGAGGAAAAACATAGAGG TCTACTCCGCAAGCATGTGGCAAGGTCACAAGAAAGGTAAGATGGATATG TATCCTCTATTATTACCATATGCCCCAAGATATACAAATGTTGTGTGTGT ACTGTGACCTATCTGTAACAATGCTCTGAACTGCTGTTCTTCAAACGAAA AACGACCAGGCTGGCAGTCATTCAGGAATCACTGCAGTCAATGAAGGAAA CAGAAGATAGCGTCAAGTCCAACTGTCAAAATACAGAGAGGATGGTCTTG AGGACCTTCTCCAACCTTCGCCAAGCAATTGACCTGCGTGAAAAGACCCT CGTCAAGGTTCCCAAGTGCATATCATGTACTTCCAAACACCATAGGCTCT GATAATTTATCCATCCATCCACTCATTCAACCATCAATACTCCTTAAAAA AAGGAATGTAATGGTTATGTTGCTCGGTGTCTAGAGTATATAAAAATTAC TCCCTCCAGGATATGGAAAGGTTGTGCAATACTTCACCTCCCTTTTATTG TATTTGAGACAAGAATTGAACCCTTTCTCCATCCAACGATCAGTACTTTC ATCCATACGAGCTGTATAAGAAATGATTGCATTTTTTTGTTCTGTGTTTA TTCTGTGTATATTGCTCTTTTTTTGTATAATTCAAAAAAAGTATATACAT GGACAAGCCCCTGCCGCTACTGACCTTATCACATGCAAGGTTTTATTTTT TAACACATTCAATCATATTGAAGATAACTTCCTGCAAACAACATACCATT TTTGAAGTATAAGTATTCTAGAAGGCAAATCACGAATTATAGTGAATGAT ATTGAAGCGGGCAATTTTAGATCATTTGTGAAGCCGCTGTTATTAGGTAG GTGTCCCCGTTTCGGGAACGATACATTTTGCCCCGGAAGTGCTACTACCA TCACAAAAACAGAGGCTGGGAAGTGTGCAGCATCAATATCCAATGCTGAT ACAATGCTTCCTACTTATTCCAGGCGTTGAAGAGGATAGAAGAGGTTAAG GTTCGCGCCCTATCGAGGCAAATAAAGGCTCTTGAGAAGGTCGTTGCGGC ATACGATACTGCCCTGGATACTGCTGGTCTATGCCTGGATCAACTACATT GCGATGAGTTCATGGCCACAGGGCCGTGCATTGAGCAACGTATGGATGTA AGCACCGACGTATTTACTTCTGTAGGAGATCTCCCTCCCAAAAAGCAAAG ATCGTAGTCCTTTGTTGGAAAGGATGACTCCAATCCTGTGATTTCTTCGA CACCGATGTGATCATGCACTTGCCCACTCAGGCTCTACAGCAGCAAGCCC AATCTCTGCAACTTGAGCCATGTGTGGACGATCACATCAGCTTCAGCTGT GACAAGGGAATTCTGGACTGTGCTCGGCACCAGATTTCGAAGTTGGGATC AGTCAACAGCATCTCTGCGGTTAAAGAGGCAGGGTCCAAGGTACAAGAAC AGGAACAGGTTGAGGGTACCAAGCTTCACTTCAACCTAGAGGCTAGTGTT GGGGTACATCCTAGGCATGTGGGGTTTGCTGTGCCGACAGACAAGGTTGT AGTTGAGGTCCGAGGTGGAAGCGAGGCAGAGGTTCTTTCAGGTGGAAAGG AAGGTCCACTTATTGGCAGGGTTATTTTGGTGACACAGCTCGAGGGGGCA GGTCAAACGTCTTTCCAGTCCGAACAGCTTTTTGAATCCCTCTCACAAGC TTCAAACATGGGTTCCAGCAGTAGTGCGAGCAATGTGTCAACAAGTATTC CCACTGTCAGGTTCACCAAGGTCCTCAGGGTGGCAAAAGGATGATCATGG AGCTTTTTGTGTCACCTGCTCCACCAACCCATGAGTAAGATTGAACCCCA AAAACGCTCACTATGAAGAATCAGTGGTGTTGTATATATTTGCAAGTGGG ATGAGTCTTTGTACTCTGTTAAAGCATTTGTCTACATACTGAAATGTTTA TCCCTTCCTGCTTTTTTTTTGATAAATCGGAATGGAAAGATATCATAAAC CCATTGTTCTCGAAATGGCCATGGTTAGTCTTAGATTTTAGATTTATTCT AAGTTATTTGTAAAACCATAAAATTTAAAATGTTAGTTATTAAAATACAG TACCACCCTCACCGCCCAATCACAATCATCAATCGTTCCAAATTGTTCTG GTATTTTGAATTTCTTCTGATGTCAATTTTTTTGCTAACAACCAATTTAC GTACCATAGAGTACTTTTTGATACCAAGACAGATCTTTAGTAAGGAGATC AGGTCCTGTTAGACATAATCTGATCCATGTCTCACCAATTTCTCCAGGCC TATCACGAACCAAATCATATAGTAAGCTGCGCAAACACCCTATTACTGGG AGAGCCCGATTTCTATTGTAGCAAAAAAGAGCATGTCCAAGACATGATAT GTCGTGTCGAACGCAATAGTATTGTGCAGTTGAGGGAGAGGATCATTGCA CACACCAAATATGATCAAAAGATCAGGTAAAGGTCCAGTACCCATTGTGT AAAGTAGCAGCACTATCCACTTTTCAGCGACGATACTCACCAAAAATCTA ACGCCTATTGTTGGGAGATGTGCAAGTGAGTTGGGTGTAGCAAATTTGAC TAGACTCTTCAGTTAACAGCCTCTCGGCAAAATTGAGGATGGAGCATACC ATGGAGGATGAGTTTGACCCAAAATGGTGCACAGGAA
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig7123:3275..6911+

>mRNA_C-tenellus_contig7123.2.1 ID=mRNA_C-tenellus_contig7123.2.1|Name=mRNA_C-tenellus_contig7123.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1335bp|location=Sequence derived from alignment at C-tenellus_contig7123:3275..6911+ (Choristocarpus tenellus KU2346)
ATGGAAGAATCCCTCCAAAGATACAGGGGAGTTGCCGAGGCGCCTTGCCC
TATCTGTGGGATCATCACCGAGACTGCAGACACAAATGACCTTGTCAACA
ACTACGTGGTACTGCGAGGGGTCCGAGCACGGTGCCTTTGTGACTCCTGT
GATGATGCTGTGATGGCTTGTCACCGCTGTATTGATTGTGGACTTGCCTT
ATGCGCCTTCCACTTGAAGGACCACCGACGCTCCCGTGGAACAAAGTCCC
ATAAGGTGATCAAGTTGAAAGAGGTGGGGGAACGTGGTATTCAAAGCGTA
TTGCCAAGCCACATGCCCCTGTACTGCCCTCAACATCAACATGAGCGGGC
AAAGCTCTTCTGCTCCTCGCCCTGCGCAAAACTAATTTGCCATGACTGCA
GCATTCTCAGTCACAAAGGGCATGAGTTCACACTATTGCCACAAGCAGAG
GAAAAACATAGAGGTCTACTCCGCAAGCATGTGGCAAGGTCACAAGAAAG
GCTGGCAGTCATTCAGGAATCACTGCAGTCAATGAAGGAAACAGAAGATA
GCGTCAAGTCCAACTGTCAAAATACAGAGAGGATGGTCTTGAGGACCTTC
TCCAACCTTCGCCAAGCAATTGACCTGCGTGAAAAGACCCTCGTCAAGGC
GTTGAAGAGGATAGAAGAGGTTAAGGTTCGCGCCCTATCGAGGCAAATAA
AGGCTCTTGAGAAGGTCGTTGCGGCATACGATACTGCCCTGGATACTGCT
GGTCTATGCCTGGATCAACTACATTGCGATGAGTTCATGGCCACAGGGCC
GTGCATTGAGCAACGTATGGATGCTCTACAGCAGCAAGCCCAATCTCTGC
AACTTGAGCCATGTGTGGACGATCACATCAGCTTCAGCTGTGACAAGGGA
ATTCTGGACTGTGCTCGGCACCAGATTTCGAAGTTGGGATCAGTCAACAG
CATCTCTGCGGTTAAAGAGGCAGGGTCCAAGGTACAAGAACAGGAACAGG
TTGAGGGTACCAAGCTTCACTTCAACCTAGAGGCTAGTGTTGGGGTACAT
CCTAGGCATGTGGGGTTTGCTGTGCCGACAGACAAGGTTGTAGTTGAGGT
CCGAGGTGGAAGCGAGGCAGAGGTTCTTTCAGGTGGAAAGGAAGGTCCAC
TTATTGGCAGGGTTATTTTGGTGACACAGCTCGAGGGGGCAGGTCAAACG
TCTTTCCAGTCCGAACAGCTTTTTGAATCCCTCTCACAAGCTTCAAACAT
GGGTTCCAGCAGTAGTGCGAGCAATGTGTCAACAAGTATTCCCACTGTCA
GGTTCACCAAGGTCCTCAGGGTGGCAAAAGGATGA
back to top