mRNA_C-tenellus_contig10469.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10469.2.1
Unique NamemRNA_C-tenellus_contig10469.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.020e-54
Identity = 129/341 (37.83%), Postives = 171/341 (50.15%), Query Frame = 3
Query: 1785 CSRVWSVGVLHVRGLCEDVADQLARGHMLDLGVVACSGRP*ELTPIKMVAIHSINYDNRSFTVRQVTMKMVAKGLNYNTSAINRWLDDMGAMPNHRWIKPKLKSWQKVWRMDFICDQVDK--------------DDS-----------------DLPGSPITQHKSHIHKTVIIAANAHPDSTHSFDGKLSF*HVYAPKTADRTSKNHKK-----------------------EDVYEQYCTLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMV 2645
            C R + VG  +   L + V  Q+     LDL     SGRP  LTP K+ A+ ++N  NRS T+RQV+ ++   GL +    + RW   +GA      IKP L   QK  RMDFI D+VD+              D+S                 D+PG P   H+SH+ K ++I ANA PD  H FDGK+    +   +TA R+SK                           ++ YE  CT++   Y+ WY++ LLPAIK KMP L  K +V+QQD A+PHTGK N EIL  AG   GW + LV QP+ SP+LNI  L  F SLK RV      SI+E+V
Sbjct:   25 CER-YGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 114 bits (286), Expect = 9.450e-24
Identity = 85/299 (28.43%), Postives = 147/299 (49.16%), Query Frame = 3
Query: 1974 RQVTMKMVAKGLNYNTSAINRWLDDMGAMPNHRWIKPKLKSWQKVWRMDFICDQVDKDD---SDL-------------------------PGSPITQHKSH--IHKTVIIAANAHPDSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYC-TLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTG 2777
            R+ T++ +AK ++ + + ++R + +    P+   +KP L    K  R++F   Q+D D    SD+                            P  + KS   I K + +AA A P +   F GK+        + A R SKN     +  +   ++   + +   +E+++PAI  K P  +R  I+IQQD+A PH   +N+E +  A K  G+ IRL+ QP NSP+LN++ L FFRS++    E+   +IEE+V  +K+ ++EY    L R +        +++++KG ND+ + H G
Sbjct:   35 RRSTVRSLAKAISVSKTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRLEFCLSQIDPDTLLFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPRN--GFSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGMRT-IIIQQDNAKPHIDCNNAEFMQAASKD-GFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMG 329          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: A0A6A4ECW5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4ECW5_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.810e-21
Identity = 78/248 (31.45%), Postives = 125/248 (50.40%), Query Frame = 3
Query: 2157 LPGSPITQH----KSHIHKTVIIAANAHPDSTHS----FDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYC-TLNHLRYRKWYMEELLPAIKTKMP*LLRKH-IVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDMEALFVADKMVMDG 2870
            LPG  +       K  I KT+ +AA A P   ++    FDGK+          A  +SKN     +  +   T+N   Y+++ +E ++PAIK+K P   +   IVIQQD+ATPH    + +IL  AG   GW+IRL  QP+NSP+LN + L +F S++     E    I ++++ I+K Y   +   L+     L      V+R  G N++ + H G  K +   KL ++   D++A   A  ++ +G
Sbjct:  214 LPGETVPHRERKSKRFIGKTMFLAAVARPRFDNNGQVLFDGKIGIWDFTHKVDAQHSSKNRPAGTLETKNLDTVNREVYKRYLLEHIIPAIKSKWPVWDKSSPIVIQQDNATPHCQPTDPDIL-AAGVADGWNIRLAFQPANSPDLNTLDLGYFASIQALPYREDCCDIVQLIQAIRKSYAALEVYKLDNITLTLQSSMECVMRAAGSNEYKLPHAGKSKIRREGKLPHSFPCDLDAFRHAVAVLHEG 460          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 106 bits (265), Expect = 1.330e-20
Identity = 86/311 (27.65%), Postives = 144/311 (46.30%), Query Frame = 3
Query: 1974 RQVTMKMVAKGLNYNTSAINRWLDDMGAMPNHRWIKPKLKSWQKVWRMDFICDQVDKDDSD------------------------------LPGS--PIT--QHKSHIHKTVIIAANAHP----DSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCTLNHLRY--RKWYMEELLPAIKTKMP*LLRKH---IVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTG 2777
            R+  ++ +A  LN + S ++R + +    P+   IKP L    K  R++F   ++ +  S                               +PG   P+   Q K  I K + +AA A P         F GK+        + A R+SKN +     E    L+  +   R W +E++LP I+ K P   R H   I IQQD+A PH   +++E L  A +  G+ IRL  QPSNSP+LN++ L FFR+++    +E  G+I+E+V  ++  +E+     L   +  L     ++++ +GGN++ + H G
Sbjct:   99 RRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKN-RVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWP---RSHVGPIFIQQDNAKPHIDVNDNEFLEAASQD-GFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIG 404          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI001F5D24F1 (uncharacterized protein LOC124671868 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D24F1)

HSP 1 Score: 106 bits (265), Expect = 1.810e-20
Identity = 70/206 (33.98%), Postives = 109/206 (52.91%), Query Frame = 3
Query: 2172 ITQHKSHIHKTVIIAANAHP----DSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCT-LNHLRYRKWYMEELLPAIKTKMP*LLR-KHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEH 2771
            +T++K++I K + +AA A P    D T +FDGK+        + A + S N  K  +  +  T +     R+W + ++LPAIK K P   R + I IQQD+A  H   D+  +   A +  GW IRL+ QP NSP+LNI+ L FF +L+    +   GS++E+V  + + YE+Y      R +  L     ++L  KG N + V H
Sbjct:  226 VTKNKNYIEKVMFVAAVARPRYDVDGTETFDGKIGVWPFTFEEAAKKDSPNRLKGTMVTKVITSVTRDVSREWLVNKVLPAIKAKWPASERGQTIYIQQDNARTHIPVDDP-VFCAAAQADGWDIRLICQPPNSPDLNILDLGFFAALQSLFHKLFPGSLDEIVLKVFQAYEQYPTERTNRIFLTLQSCMREILNLKGSNHYKVPH 430          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: A0A484KKG0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KKG0_9ASTE)

HSP 1 Score: 100 bits (250), Expect = 8.710e-20
Identity = 66/234 (28.21%), Postives = 116/234 (49.57%), Query Frame = 3
Query: 2184 KSHIHKTVIIAANAHP----DSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCT-LNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDMEALFVADKMVMDG 2870
            K+HI K + + A   P    +    +DGK+    +     A R SKN     +  +    +    YR   ++++LPAIK K+P  + KHI+IQQD+A PH   ++ E +       G+SI L  QP NSP+LNI+ L FF S++    +    +++E+V+ + + Y   +   L   W    +   ++++ +GGN++ + H G  + +    L N  +V  + L+ A    + G
Sbjct:   24 KAHIPKLMHLCAVGRPIFGPEGEVIWDGKVGIWPLTIQVPAQRRSKNRAAGTLETKPIPRITKEVYRTLMIQQVLPAIKEKVPEAITKHIIIQQDNAKPHIDVNDPEFV-QVANADGYSIELTCQPPNSPDLNILDLGFFASIQSLQHQTSTRNVDELVQHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGKARLEREGALPNQLQVSTK-LYQASVCALQG 255          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI001D0245D6 (uncharacterized protein LOC123072166 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0245D6)

HSP 1 Score: 103 bits (257), Expect = 1.560e-19
Identity = 80/275 (29.09%), Postives = 131/275 (47.64%), Query Frame = 3
Query: 2055 AMPNHRWIK---PKLKSWQKVWRMD---FICDQVDKDDSDLPGSP----ITQHKSHIHKTVIIAANAHPDSTH----SFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCTLNHLRYRKWYMEELLPAIKTKMP*LLRKH-IVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDME 2834
            +M +  W++   P  +    +  MD   F   Q +     LP  P       HK  I K + +AA A P   +    +FDGK+          A R S+N ++  +  +   +     R +  E+L+PAI    P    +  I IQQD+ATPH  K + E+   A +  G  I+L+ QP NSP+LNI+ L FFRSL+         SI E+++ ++++Y+ YD   L R++  L     +++R KGG  + + H    +RQ   +L     +++E
Sbjct:   60 SMADENWLRTPWPLFRELDDIVYMDEKWFNLTQEENGYLLLPEEPDPLRTLHHKDSIAKVMFLAAVAKPRYGNVGVVTFDGKIGIWAFVTESPAQRRSENRERGTLELKSLKVTRDVMRLYMCEKLIPAIHDLWPDEDEERTIFIQQDNATPHL-KPSDEVFRRAVEQTGLDIKLIQQPPNSPDLNILDLCFFRSLQSHTDCRAPQSIRELIEGVEEEYQNYDVNTLARSFVTLQSCMREIMREKGGIGYKIPHMQKERRQQEGRLPIALSLNVE 333          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI000E6FA012 (uncharacterized protein LOC113281887 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FA012)

HSP 1 Score: 99.4 bits (246), Expect = 1.680e-19
Identity = 67/208 (32.21%), Postives = 109/208 (52.40%), Query Frame = 3
Query: 2178 QHKSHIHKTVIIAANAHPD----STHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYC-TLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRK 2786
            Q K +I K + +AA A P         F+GK+        + A RTSKN     + ++   ++N    R   +++LLPAI+ K P    + I IQ+D+A PH   D+ E L  A K  G+ IRL  QPS SP++N++ L FFR+++     E   ++ E++  + K + E    AL   +  L +   +VL+  GGN++ ++H G +K
Sbjct:   22 QSKRYIKKVMFLAAIARPRFDEFGNEVFNGKIGIFPFVTKEAAKRTSKNRPAGTLEDKPIESVNKDVTRACLIKKLLPAIREKWPNYNGETIYIQRDNAKPHMKVDDEEFLKEAAKE-GFDIRLRFQPSQSPDMNVLDLGFFRAIQSLQHREAPTTVGELLSAVDKAFNELSAQALNDVFLSLQLCMVEVLKLHGGNNYKLQHIGKKK 228          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI000E6FFC28 (uncharacterized protein LOC113313105 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FFC28)

HSP 1 Score: 104 bits (259), Expect = 1.720e-19
Identity = 90/333 (27.03%), Postives = 153/333 (45.95%), Query Frame = 3
Query: 1974 RQVTMKMVAKGLNYNTSAINRWLDDMGAMPNH-RWIKPKLKSWQKVWRMDFICDQVDKDD--SDLPGSPI--------------------------------TQHKSHIHKTVIIAANAHPD----STHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYC-TLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDMEALFVAD 2852
            ++ +++ +A+ LN   S ++R++   GA+  H   IKP      K  R++F    V+ +   S L   P+                                 Q K +I K + +AA A P         F+GK+        + A RTSKN     + ++   ++N    R  ++ +LLPAI+ K P    + I IQQD+A PH   D+ E L  A K  G+ IRL  QPS SPN+N++ L FFR ++     E   ++ E++  + K + E     L   +  L +   +VL+  GGN++ ++H G  K++L+   E   +++M+   V +
Sbjct:  170 KRTSIRSIAEALNMPKSTVHRYVKK-GAIKKHTNAIKPSFTVDTKKTRLEFCLGMVEINPYKSSLMIKPMYDVIHIDEKWFFMTKTTENYYIHPKETEPYRTCQSKRYIQKVMFLAAVARPRFDEFGNEVFNGKIGIFPFVVKEAAKRTSKNRLAGTLEDKSIQSVNKDITRACFVNKLLPAIREKWPNYNGETIYIQQDNAKPHVKVDDEEFLKEAAKE-GFDIRLRFQPSQSPNMNVLDLGFFRDIQSLQHREAPTTVGELLSAVDKAFNELSAQTLNDVFLSLQLCMVEVLKLHGGNNYKLQHIG--KQKLARTGELPTQIEMDKNLVKE 498          
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.400e-19
Identity = 62/223 (27.80%), Postives = 115/223 (51.57%), Query Frame = 3
Query: 2184 KSHIHKTVIIAANAHP----DSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCTLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDMEAL 2840
            K  I K + ++A A P    D+   FDGK+   H      A RTS+N     +  Q  ++    Y+   +++++P IK+K P    ++++IQQD+A PH    +S I+  A K+ GW++++V QP NSP+LNI+ L FFR+++    +    +I++++    + + +   + L   +  L     +++  +G N++ + H G  K     +L     VD E +
Sbjct:  211 KRFISKVMFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPHVPPSDSAIV-DACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDIIAATDQAWSDELSSTLNDNFLTLQGCMQEIISAQGDNNYKIPHMGKAKLAARGRLPEVLSVDSEVV 432          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE2.020e-5437.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0007F012D19.450e-2428.43uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
A0A6A4ECW5_9STRA1.810e-2131.45Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]
UPI000CD873B31.330e-2027.65uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
UPI001F5D24F11.810e-2033.98uncharacterized protein LOC124671868 n=1 Tax=Loliu... [more]
A0A484KKG0_9ASTE8.710e-2028.21Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
UPI001D0245D61.560e-1929.09uncharacterized protein LOC123072166 n=1 Tax=Triti... [more]
UPI000E6FA0121.680e-1932.21uncharacterized protein LOC113281887 n=1 Tax=Papav... [more]
UPI000E6FFC281.720e-1927.03uncharacterized protein LOC113313105 n=1 Tax=Papav... [more]
A0A6A4YXI9_9STRA2.400e-1927.80Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10469contigC-tenellus_contig10469:58..2953 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2896
Hectar predicted targeting categoryother localisation
Exons1
Cds size345
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789133.176865-UTR-C-tenellus_contig10469:57..19821680789133.176865-UTR-C-tenellus_contig10469:57..1982Choristocarpus tenellus KU2346UTRC-tenellus_contig10469 58..1982 +
1680789133.2005243-UTR-C-tenellus_contig10469:2327..29531680789133.2005243-UTR-C-tenellus_contig10469:2327..2953Choristocarpus tenellus KU2346UTRC-tenellus_contig10469 2328..2953 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789133.1897109-CDS-C-tenellus_contig10469:1982..23271680789133.1897109-CDS-C-tenellus_contig10469:1982..2327Choristocarpus tenellus KU2346CDSC-tenellus_contig10469 1983..2327 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10469.2.1prot_C-tenellus_contig10469.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10469 1983..2327 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10469.2.1

>prot_C-tenellus_contig10469.2.1 ID=prot_C-tenellus_contig10469.2.1|Name=mRNA_C-tenellus_contig10469.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=115bp
MVAIHSINYDNRSFTVRQVTMKMVAKGLNYNTSAINRWLDDMGAMPNHRW
IKPKLKSWQKVWRMDFICDQVDKDDSDLPGSPITQHKSHIHKTVIIAANA
HPDSTHSFDGKLSF*
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mRNA from alignment at C-tenellus_contig10469:58..2953+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10469.2.1 ID=mRNA_C-tenellus_contig10469.2.1|Name=mRNA_C-tenellus_contig10469.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2896bp|location=Sequence derived from alignment at C-tenellus_contig10469:58..2953+ (Choristocarpus tenellus KU2346)
AGTGCCCTCCTGGTGGGTGTGCAAACAACGCTGGTCGCATTTTGCACCAT GCATATTTGATATGTTTTAAAGGAGAGCTATCATGGCGCATTCCATATAC ACGAGGAAGGCGTTTAGGTGGGCAAAGCTAGGGGTAGTTTGAGTACGATG TGAATCCTATGTATGCTTCTTAGAGTTGGGGTCACACCGGACATATGTAA CAAGATAATATTGCGTGGGTGCGGCGAGAGTGTACTTGCATGGGCAGCAA AATGCTTTTTTTGGGGGGGGGAGAGCGGGGATTGTTTCGAGTGATGGGAC TGGGTTGGAGCGGGAGAGAAGAAATGGGAAGGCGTCCATGATTCGGATGC AAATTGAACTTGCCCGACCTTGCGATTCATAGACTAGTAGTACATGTCCA CGCAAATAGAATTTTCGAAATCTCTAATGGAGTCTCACCGTTAGTCTCCC ATCCCCCCTCCCCTTCCTTGTCCTTGGCGTGGAAGGCCTCGCTATTTTGG GTTATTAGGATGAAGACCGTACCCATAGTTGTTGATATTTTTTTGGGGGG GGCAGGTCTGAGTTGAAGGTGTTACATGTAAGATGAATATAAGTTTATTT TTATATTTGTGGGTTGTAGTTGTGTCTGGTTGTTTCTTGTTCCATTTTGA TTTTTTTTTTCTCTATCGGGGTCATCTTGCTCCACTCTTTCCTCTATTTT TTCTTTTTTGATTGCACACTGCGTTTTTCACAATGTGTATGTGTGTGCGT TTTTTTCAGAAGAAAAAAAGAGATTGCAGAAGCTTTGGAGCAACCCTTTG GTTTTAGATAGCAAGTGTAAGCGACTAGTTGACTGTGCAGGCGTATTGTC TTTTAGGTGGGGGTTATATGATGGTGCTTGAGGTTAGGTAAATGTTTTCA ACACATTGATTTGTTTTTTTTTATTGTTTGGGTTGGCAAATCAGTGAGAA GGAAGGCATCAGTTGTTTGTGCTTGTATGCTGTCGTTGCATTTTGCTGCA CAAGTGCGACTGTCAGCATGCAGCTGCCTCGTTTGTTGTGATGTATTCAC TTGCCACAATCTAGGGATTTACTCTAGATTCCCTGGCAGCCTGAAGATAG AGAGATTGATTGTTACTGTGCCCCTTCTATTGTAGCCAGAGGTGGCTGTG GATGCCTGCCTGGTATAGTAAATATTGTCATACTGATCCAGGAGATAAAG CAGTGACCACCTGGAACCCTGCACAAATGTGCAGCCAAAGGCATAAATGT AATTTGTCTTGTGTGCAGCTGTTCAAGTTTGATTGGGCTGATGTTGACCT TGCACTCTTCCATATATGCTCAAGTATATATATATACATAATTCATCTTG TTAAAATTCATACCCACGATAATAGGAGGAGCTTCTCATAACAATTCTGG AGCATTTGTACTCTACCTCTGTGCCATAAGTTTGTGCCGAGAAACGTCTA GGCTCACCGATCAAGGACGGCGCCAAATTGGATGATAACTCCCCAAAATG AAATCGGGTTGACAATCTCAGCTTTCAGAATAGGTGAGGGTCGAGGATCA TCAGGTACAAACTCAAGGCGCTTCAAGCAGTTGAAGTAGGGGTCTTTGAG GTGATTTTGAGGCCAGAACTGGGCACGTCGAGCAGAACATCAGCATGGCA ACCCCCCCGTTGACCCCCCCACGTAGGAAGGATGCCCAAGTGTCCCTAAA TACCAGGGTTGCACTTGCAGTGCGGCACGCCCTTGCGATGGTCCCTGGTG AGCATTAATTGCTGTGACACGTTGGACCAGGCCTTGCAGCAGAGTTTGGA GTGTCGGAGTGTTACATGTGAGAGGGCTCTGTGAGGATGTCGCCGATCAG CTCGCCCGTGGCCACATGCTTGACCTAGGGGTAGTGGCATGTAGTGGGCG GCCTTAGGAACTCACACCAATCAAGATGGTCGCAATACATAGTATCAACT ACGATAATCGGTCATTCACAGTGCGTCAGGTGACAATGAAGATGGTCGCC AAGGGGCTGAATTATAACACAAGCGCTATAAACAGGTGGTTGGATGATAT GGGGGCCATGCCGAATCACCGCTGGATCAAACCCAAGCTTAAATCGTGGC AAAAGGTATGGAGAATGGACTTTATTTGCGATCAAGTGGACAAGGATGAT AGCGACCTTCCAGGGTCCCCTATTACGCAACACAAGAGTCATATCCATAA AACCGTTATCATTGCAGCCAATGCCCACCCAGATTCGACTCACAGCTTTG ATGGGAAACTTAGTTTTTGACATGTGTATGCACCAAAAACGGCAGATAGG ACAAGCAAGAACCATAAAAAGGAGGATGTGTATGAGCAGTACTGTACTTT AAACCATTTGAGGTACAGGAAGTGGTACATGGAGGAGTTACTGCCCGCAA TCAAGACTAAGATGCCTTGATTGCTGAGGAAGCACATTGTCATTCAGCAA GACAGTGCCACCCCCCACACGGGCAAGGACAACTCGGAAATCTTGTGAGG GGCAGGGAAGACTGCGGGGTGGTCGATTAGGCTTGTGATGCAGCCATCTA ACTCCCCCAACCTCAATATTATGCACCTGTTCTTCTTCAGGTCTTTGAAA TGCCGGGTGATGGAGGAGCGGTTTGGGTCCATTGAAGAGATGGTGAAGGT GATTAAGAAACAGTATGAGGAGTATGATGAAACCGCACTTGAGAGGGCTT GGCAGCTCCTTTTTGTGGTGTACAATCAAGTACTTAGATACAAAGGGGGG AATGACTTCAGTGTGGAACACACAGGGGTAAGGAAGAGGCAGTTGTCTGT TAAGCTTGAAAACACGCCAAAGGTAGACATGGAGGCTCTTTTTGTGGCTG ATAAAATGGTGATGGATGGGGAGCAATAATGATAAAAAGAGCTGAC
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Coding sequence (CDS) from alignment at C-tenellus_contig10469:58..2953+

>mRNA_C-tenellus_contig10469.2.1 ID=mRNA_C-tenellus_contig10469.2.1|Name=mRNA_C-tenellus_contig10469.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=345bp|location=Sequence derived from alignment at C-tenellus_contig10469:58..2953+ (Choristocarpus tenellus KU2346)
ATGGTCGCAATACATAGTATCAACTACGATAATCGGTCATTCACAGTGCG
TCAGGTGACAATGAAGATGGTCGCCAAGGGGCTGAATTATAACACAAGCG
CTATAAACAGGTGGTTGGATGATATGGGGGCCATGCCGAATCACCGCTGG
ATCAAACCCAAGCTTAAATCGTGGCAAAAGGTATGGAGAATGGACTTTAT
TTGCGATCAAGTGGACAAGGATGATAGCGACCTTCCAGGGTCCCCTATTA
CGCAACACAAGAGTCATATCCATAAAACCGTTATCATTGCAGCCAATGCC
CACCCAGATTCGACTCACAGCTTTGATGGGAAACTTAGTTTTTGA
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