mRNA_C-tenellus_contig10469.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.020e-54 Identity = 129/341 (37.83%), Postives = 171/341 (50.15%), Query Frame = 3 Query: 1785 CSRVWSVGVLHVRGLCEDVADQLARGHMLDLGVVACSGRP*ELTPIKMVAIHSINYDNRSFTVRQVTMKMVAKGLNYNTSAINRWLDDMGAMPNHRWIKPKLKSWQKVWRMDFICDQVDK--------------DDS-----------------DLPGSPITQHKSHIHKTVIIAANAHPDSTHSFDGKLSF*HVYAPKTADRTSKNHKK-----------------------EDVYEQYCTLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMV 2645 C R + VG + L + V Q+ LDL SGRP LTP K+ A+ ++N NRS T+RQV+ ++ GL + + RW +GA IKP L QK RMDFI D+VD+ D+S D+PG P H+SH+ K ++I ANA PD H FDGK+ + +TA R+SK ++ YE CT++ Y+ WY++ LLPAIK KMP L K +V+QQD A+PHTGK N EIL AG GW + LV QP+ SP+LNI L F SLK RV SI+E+V Sbjct: 25 CER-YGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 114 bits (286), Expect = 9.450e-24 Identity = 85/299 (28.43%), Postives = 147/299 (49.16%), Query Frame = 3 Query: 1974 RQVTMKMVAKGLNYNTSAINRWLDDMGAMPNHRWIKPKLKSWQKVWRMDFICDQVDKDD---SDL-------------------------PGSPITQHKSH--IHKTVIIAANAHPDSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYC-TLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTG 2777 R+ T++ +AK ++ + + ++R + + P+ +KP L K R++F Q+D D SD+ P + KS I K + +AA A P + F GK+ + A R SKN + + ++ + + +E+++PAI K P +R I+IQQD+A PH +N+E + A K G+ IRL+ QP NSP+LN++ L FFRS++ E+ +IEE+V +K+ ++EY L R + +++++KG ND+ + H G Sbjct: 35 RRSTVRSLAKAISVSKTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRLEFCLSQIDPDTLLFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPRN--GFSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGMRT-IIIQQDNAKPHIDCNNAEFMQAASKD-GFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMG 329
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: A0A6A4ECW5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4ECW5_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.810e-21 Identity = 78/248 (31.45%), Postives = 125/248 (50.40%), Query Frame = 3 Query: 2157 LPGSPITQH----KSHIHKTVIIAANAHPDSTHS----FDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYC-TLNHLRYRKWYMEELLPAIKTKMP*LLRKH-IVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDMEALFVADKMVMDG 2870 LPG + K I KT+ +AA A P ++ FDGK+ A +SKN + + T+N Y+++ +E ++PAIK+K P + IVIQQD+ATPH + +IL AG GW+IRL QP+NSP+LN + L +F S++ E I ++++ I+K Y + L+ L V+R G N++ + H G K + KL ++ D++A A ++ +G Sbjct: 214 LPGETVPHRERKSKRFIGKTMFLAAVARPRFDNNGQVLFDGKIGIWDFTHKVDAQHSSKNRPAGTLETKNLDTVNREVYKRYLLEHIIPAIKSKWPVWDKSSPIVIQQDNATPHCQPTDPDIL-AAGVADGWNIRLAFQPANSPDLNTLDLGYFASIQALPYREDCCDIVQLIQAIRKSYAALEVYKLDNITLTLQSSMECVMRAAGSNEYKLPHAGKSKIRREGKLPHSFPCDLDAFRHAVAVLHEG 460
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3) HSP 1 Score: 106 bits (265), Expect = 1.330e-20 Identity = 86/311 (27.65%), Postives = 144/311 (46.30%), Query Frame = 3 Query: 1974 RQVTMKMVAKGLNYNTSAINRWLDDMGAMPNHRWIKPKLKSWQKVWRMDFICDQVDKDDSD------------------------------LPGS--PIT--QHKSHIHKTVIIAANAHP----DSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCTLNHLRY--RKWYMEELLPAIKTKMP*LLRKH---IVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTG 2777 R+ ++ +A LN + S ++R + + P+ IKP L K R++F ++ + S +PG P+ Q K I K + +AA A P F GK+ + A R+SKN + E L+ + R W +E++LP I+ K P R H I IQQD+A PH +++E L A + G+ IRL QPSNSP+LN++ L FFR+++ +E G+I+E+V ++ +E+ L + L ++++ +GGN++ + H G Sbjct: 99 RRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKN-RVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWP---RSHVGPIFIQQDNAKPHIDVNDNEFLEAASQD-GFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIG 404
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI001F5D24F1 (uncharacterized protein LOC124671868 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D24F1) HSP 1 Score: 106 bits (265), Expect = 1.810e-20 Identity = 70/206 (33.98%), Postives = 109/206 (52.91%), Query Frame = 3 Query: 2172 ITQHKSHIHKTVIIAANAHP----DSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCT-LNHLRYRKWYMEELLPAIKTKMP*LLR-KHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEH 2771 +T++K++I K + +AA A P D T +FDGK+ + A + S N K + + T + R+W + ++LPAIK K P R + I IQQD+A H D+ + A + GW IRL+ QP NSP+LNI+ L FF +L+ + GS++E+V + + YE+Y R + L ++L KG N + V H Sbjct: 226 VTKNKNYIEKVMFVAAVARPRYDVDGTETFDGKIGVWPFTFEEAAKKDSPNRLKGTMVTKVITSVTRDVSREWLVNKVLPAIKAKWPASERGQTIYIQQDNARTHIPVDDP-VFCAAAQADGWDIRLICQPPNSPDLNILDLGFFAALQSLFHKLFPGSLDEIVLKVFQAYEQYPTERTNRIFLTLQSCMREILNLKGSNHYKVPH 430
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: A0A484KKG0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KKG0_9ASTE) HSP 1 Score: 100 bits (250), Expect = 8.710e-20 Identity = 66/234 (28.21%), Postives = 116/234 (49.57%), Query Frame = 3 Query: 2184 KSHIHKTVIIAANAHP----DSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCT-LNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDMEALFVADKMVMDG 2870 K+HI K + + A P + +DGK+ + A R SKN + + + YR ++++LPAIK K+P + KHI+IQQD+A PH ++ E + G+SI L QP NSP+LNI+ L FF S++ + +++E+V+ + + Y + L W + ++++ +GGN++ + H G + + L N +V + L+ A + G Sbjct: 24 KAHIPKLMHLCAVGRPIFGPEGEVIWDGKVGIWPLTIQVPAQRRSKNRAAGTLETKPIPRITKEVYRTLMIQQVLPAIKEKVPEAITKHIIIQQDNAKPHIDVNDPEFV-QVANADGYSIELTCQPPNSPDLNILDLGFFASIQSLQHQTSTRNVDELVQHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGKARLEREGALPNQLQVSTK-LYQASVCALQG 255
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI001D0245D6 (uncharacterized protein LOC123072166 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0245D6) HSP 1 Score: 103 bits (257), Expect = 1.560e-19 Identity = 80/275 (29.09%), Postives = 131/275 (47.64%), Query Frame = 3 Query: 2055 AMPNHRWIK---PKLKSWQKVWRMD---FICDQVDKDDSDLPGSP----ITQHKSHIHKTVIIAANAHPDSTH----SFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCTLNHLRYRKWYMEELLPAIKTKMP*LLRKH-IVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDME 2834 +M + W++ P + + MD F Q + LP P HK I K + +AA A P + +FDGK+ A R S+N ++ + + + R + E+L+PAI P + I IQQD+ATPH K + E+ A + G I+L+ QP NSP+LNI+ L FFRSL+ SI E+++ ++++Y+ YD L R++ L +++R KGG + + H +RQ +L +++E Sbjct: 60 SMADENWLRTPWPLFRELDDIVYMDEKWFNLTQEENGYLLLPEEPDPLRTLHHKDSIAKVMFLAAVAKPRYGNVGVVTFDGKIGIWAFVTESPAQRRSENRERGTLELKSLKVTRDVMRLYMCEKLIPAIHDLWPDEDEERTIFIQQDNATPHL-KPSDEVFRRAVEQTGLDIKLIQQPPNSPDLNILDLCFFRSLQSHTDCRAPQSIRELIEGVEEEYQNYDVNTLARSFVTLQSCMREIMREKGGIGYKIPHMQKERRQQEGRLPIALSLNVE 333
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI000E6FA012 (uncharacterized protein LOC113281887 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FA012) HSP 1 Score: 99.4 bits (246), Expect = 1.680e-19 Identity = 67/208 (32.21%), Postives = 109/208 (52.40%), Query Frame = 3 Query: 2178 QHKSHIHKTVIIAANAHPD----STHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYC-TLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRK 2786 Q K +I K + +AA A P F+GK+ + A RTSKN + ++ ++N R +++LLPAI+ K P + I IQ+D+A PH D+ E L A K G+ IRL QPS SP++N++ L FFR+++ E ++ E++ + K + E AL + L + +VL+ GGN++ ++H G +K Sbjct: 22 QSKRYIKKVMFLAAIARPRFDEFGNEVFNGKIGIFPFVTKEAAKRTSKNRPAGTLEDKPIESVNKDVTRACLIKKLLPAIREKWPNYNGETIYIQRDNAKPHMKVDDEEFLKEAAKE-GFDIRLRFQPSQSPDMNVLDLGFFRAIQSLQHREAPTTVGELLSAVDKAFNELSAQALNDVFLSLQLCMVEVLKLHGGNNYKLQHIGKKK 228
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: UPI000E6FFC28 (uncharacterized protein LOC113313105 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FFC28) HSP 1 Score: 104 bits (259), Expect = 1.720e-19 Identity = 90/333 (27.03%), Postives = 153/333 (45.95%), Query Frame = 3 Query: 1974 RQVTMKMVAKGLNYNTSAINRWLDDMGAMPNH-RWIKPKLKSWQKVWRMDFICDQVDKDD--SDLPGSPI--------------------------------TQHKSHIHKTVIIAANAHPD----STHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYC-TLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDMEALFVAD 2852 ++ +++ +A+ LN S ++R++ GA+ H IKP K R++F V+ + S L P+ Q K +I K + +AA A P F+GK+ + A RTSKN + ++ ++N R ++ +LLPAI+ K P + I IQQD+A PH D+ E L A K G+ IRL QPS SPN+N++ L FFR ++ E ++ E++ + K + E L + L + +VL+ GGN++ ++H G K++L+ E +++M+ V + Sbjct: 170 KRTSIRSIAEALNMPKSTVHRYVKK-GAIKKHTNAIKPSFTVDTKKTRLEFCLGMVEINPYKSSLMIKPMYDVIHIDEKWFFMTKTTENYYIHPKETEPYRTCQSKRYIQKVMFLAAVARPRFDEFGNEVFNGKIGIFPFVVKEAAKRTSKNRLAGTLEDKSIQSVNKDITRACFVNKLLPAIREKWPNYNGETIYIQQDNAKPHVKVDDEEFLKEAAKE-GFDIRLRFQPSQSPNMNVLDLGFFRDIQSLQHREAPTTVGELLSAVDKAFNELSAQTLNDVFLSLQLCMVEVLKLHGGNNYKLQHIG--KQKLARTGELPTQIEMDKNLVKE 498
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.400e-19 Identity = 62/223 (27.80%), Postives = 115/223 (51.57%), Query Frame = 3 Query: 2184 KSHIHKTVIIAANAHP----DSTHSFDGKLSF*HVYAPKTADRTSKNHKKEDVYEQYCTLNHLRYRKWYMEELLPAIKTKMP*LLRKHIVIQQDSATPHTGKDNSEIL*GAGKTAGWSIRLVMQPSNSPNLNIMHLFFFRSLKCRVMEERFGSIEEMVKVIKKQYEEYDETALERAWQLLFVVYNQVLRYKGGNDFSVEHTGVRKRQLSVKLENTPKVDMEAL 2840 K I K + ++A A P D+ FDGK+ H A RTS+N + Q ++ Y+ +++++P IK+K P ++++IQQD+A PH +S I+ A K+ GW++++V QP NSP+LNI+ L FFR+++ + +I++++ + + + + L + L +++ +G N++ + H G K +L VD E + Sbjct: 211 KRFISKVMFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPHVPPSDSAIV-DACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDIIAATDQAWSDELSSTLNDNFLTLQGCMQEIISAQGDNNYKIPHMGKAKLAARGRLPEVLSVDSEVV 432 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10469.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10469.2.1 >prot_C-tenellus_contig10469.2.1 ID=prot_C-tenellus_contig10469.2.1|Name=mRNA_C-tenellus_contig10469.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=115bp MVAIHSINYDNRSFTVRQVTMKMVAKGLNYNTSAINRWLDDMGAMPNHRWback to top mRNA from alignment at C-tenellus_contig10469:58..2953+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10469.2.1 ID=mRNA_C-tenellus_contig10469.2.1|Name=mRNA_C-tenellus_contig10469.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2896bp|location=Sequence derived from alignment at C-tenellus_contig10469:58..2953+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10469:58..2953+ >mRNA_C-tenellus_contig10469.2.1 ID=mRNA_C-tenellus_contig10469.2.1|Name=mRNA_C-tenellus_contig10469.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=345bp|location=Sequence derived from alignment at C-tenellus_contig10469:58..2953+ (Choristocarpus tenellus KU2346)back to top |