mRNA_C-tenellus_contig10459.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: A0A6S9ITP1_HETAK (ADP-ribosylation factor-like protein 6 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ITP1_HETAK) HSP 1 Score: 144 bits (362), Expect = 4.360e-41 Identity = 70/122 (57.38%), Postives = 94/122 (77.05%), Query Frame = 1 Query: 4 QMGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEV 369 +MG KK+ + M G V +LVVGLDNSGK+TL+N++KP ++ T EATPTVG +VE F+K+ +NFT+ DMSG ++YR+LWE Y DV+A+IFV+DSTDRIRMCVAK ELD LG +++ Sbjct: 13 RMGLFKKIAQAM-GMSWVEVRILVVGLDNSGKTTLINHIKP--KKATTFEATPTVGFQVEEFSKNSLNFTIFDMSGQARYRSLWEHYYRDVEAVIFVLDSTDRIRMCVAKDELDSFLGHEDI 131
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: A0A225UHK2_9STRA (ADP-ribosylation factor protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UHK2_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.310e-40 Identity = 73/122 (59.84%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEVS 372 MG K L + G +LVVGLDNSGK+TLVN+LKP Q R E PT+G +VE FTKS++NFT+ DMSG S+YR+LWE Y SDVQAII+V+DSTD IRMCVAK EL+ L+ KE+S Sbjct: 1 MGLFKLLASAL-GIKKTQVRILVVGLDNSGKTTLVNHLKPKKSQSR--EVVPTIGFQVEEFTKSNLNFTVFDMSGQSRYRSLWENYYSDVQAIIYVLDSTDTIRMCVAKDELEQLVEHKELS 119
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: H3G5F9_PHYRM (ADP-ribosylation factor-like protein 6 n=21 Tax=Phytophthora TaxID=4783 RepID=H3G5F9_PHYRM) HSP 1 Score: 138 bits (347), Expect = 4.980e-39 Identity = 72/122 (59.02%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEVS 372 MG K L + G +LVVGLDNSGK+TLVN+LKP Q R E PT+G +VE FTKS++NFT+ DMSG S+YR+LWE Y SDVQAII+V+DSTD IRMCVAK EL+ L+ KE++ Sbjct: 1 MGLFKLLASAL-GIKKTQVRILVVGLDNSGKTTLVNHLKPKKSQAR--EVVPTIGFQVEEFTKSNLNFTVFDMSGQSRYRSLWENYYSDVQAIIYVLDSTDTIRMCVAKDELEQLVEHKELA 119
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: A0A0N7L674_PLAHL (Adp-ribosylation factor-like protein 6-like isoform x3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L674_PLAHL) HSP 1 Score: 137 bits (345), Expect = 1.230e-38 Identity = 72/121 (59.50%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEV 369 MG K L + G +LVVGLDNSGK++LVN+LKP + Q R E PT+G +VE FTKS++NFT+ DMSG S+YR+LWE Y SDVQAII+V+DSTD IRMCVAK EL+ LL KE+ Sbjct: 1 MGLFKVLAAAL-GLKKTQVRILVVGLDNSGKTSLVNHLKPKNTQAR--EVVPTIGFQVEEFTKSNLNFTVFDMSGQSRYRSLWENYYSDVQAIIYVLDSTDTIRMCVAKDELEQLLEHKEL 118
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: A0A7S3H1V6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1V6_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.690e-38 Identity = 69/121 (57.02%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEV 369 MGF + +G G+ VLV+GLDNSGK+TL+++LKP ++ T E TPTVG +VE F+K+++NFT+ DMSG +YR LWE Y SDV+AIIFV+DSTDR+RMCVAK+ELD LL +E+ Sbjct: 1 MGFFSMISNA-IGWSKKGR-VLVIGLDNSGKTTLIHHLKP--KKAATFEVTPTVGFQVEEFSKNNVNFTVYDMSGQGRYRNLWEHYYSDVEAIIFVLDSTDRLRMCVAKEELDQLLAHEEI 117
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: A0A6A3WUL2_9STRA (ADP-ribosylation factor-like protein 6 n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3WUL2_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.740e-38 Identity = 72/122 (59.02%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEVS 372 MG K L + G +LVVGLDNSGK+TLVN+LKP Q R E PT+G +VE FTKS++NFT+ DMSG S+YR LWE Y SDVQAII+V+DSTD IRMCVAK EL+ L+ KE++ Sbjct: 1 MGLFKLLASAL-GIKKTQVRILVVGLDNSGKTTLVNHLKPKKSQAR--EVVPTIGFQVEEFTKSNLNFTVFDMSGQSRYRNLWENYYSDVQAIIYVLDSTDTIRMCVAKDELEQLVEHKELA 119
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: A0A5D6XUY5_9STRA (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XUY5_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.460e-38 Identity = 72/122 (59.02%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEVS 372 MG K L + G +LVVGLDNSGK+TLVN+LKP Q R E PT+G +VE FTK+++NFT+ DMSG S+YR LWE Y SDVQAII+V+DSTD IRMCVAK EL+ L+ KE+S Sbjct: 1 MGLFKMLTNAL-GIKKTQVRILVVGLDNSGKTTLVNHLKPKKSQAR--EVVPTIGFQVEEFTKANLNFTVFDMSGQSRYRNLWENYYSDVQAIIYVLDSTDSIRMCVAKDELEQLVEHKELS 119
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: A0A485KFA7_9STRA (Aste57867_3371 protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485KFA7_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.390e-38 Identity = 72/122 (59.02%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEVS 372 MG KKL + G +LVVGLDNSGK+TLVN+LKP Q E PTVG +VE FTK +++FT+ DMSG S+YR+LWE Y SDVQAIIFV+DSTD IRMCVAK EL+ +L K++S Sbjct: 1 MGLFKKLANSL-GMKKQSVRILVVGLDNSGKTTLVNHLKPKKLQSH--EVAPTVGFQVEEFTKYNLSFTVFDMSGQSRYRSLWENYYSDVQAIIFVMDSTDTIRMCVAKDELEQILQHKDLS 119
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: A0A7S2V202_9STRA (ADP-ribosylation factor-like protein 6 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V202_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.800e-38 Identity = 65/122 (53.28%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEVS 372 MGF K++ + G +L+VGLDNSGK+TL+N++KP ++ T E TPTVG +VE F+K+++NFT+ DMSG ++YR+LWE Y DVQAI+FV+DSTDRIR+CVAK EL+ ++ ++VS Sbjct: 1 MGFFKRIANSL-GFQKHEVRILIVGLDNSGKTTLINHIKP--KKATTFEVTPTVGFQVEEFSKNNLNFTIFDMSGQARYRSLWEHYYRDVQAIMFVLDSTDRIRLCVAKDELETMMAHEDVS 119
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Match: D7FVR2_ECTSI (ARL6, ARF-like Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR2_ECTSI) HSP 1 Score: 136 bits (342), Expect = 5.490e-38 Identity = 67/121 (55.37%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 7 MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEATPTVGLEVERFTKSHINFTMMDMSGSSKYRALWEQYLSDVQAIIFVIDSTDRIRMCVAKQELDGLLGQKEV 369 MG KK+ M G+ +LVVGLDNSGKSTL+ ++KP + T EATPTVG +V+ F K+++NFT++DMSG S+YR LWE Y +V A+IFV+DSTDR+RMCVAK+EL+ +L EV Sbjct: 1 MGLFKKIASAM-GRSRGNMRILVVGLDNSGKSTLIEHIKP--NKASTFEATPTVGFQVQEFAKNNLNFTVIDMSGQSRYRTLWEHYFCNVHAVIFVVDSTDRVRMCVAKEELEEVLKHDEV 118 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10459.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10459.5.1 >prot_C-tenellus_contig10459.5.1 ID=prot_C-tenellus_contig10459.5.1|Name=mRNA_C-tenellus_contig10459.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=122bp MGFLKKLGEGMVGKPSVGKTVLVVGLDNSGKSTLVNNLKPISQQGRTLEAback to top mRNA from alignment at C-tenellus_contig10459:3030..4522+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10459.5.1 ID=mRNA_C-tenellus_contig10459.5.1|Name=mRNA_C-tenellus_contig10459.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1493bp|location=Sequence derived from alignment at C-tenellus_contig10459:3030..4522+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10459:3030..4522+ >mRNA_C-tenellus_contig10459.5.1 ID=mRNA_C-tenellus_contig10459.5.1|Name=mRNA_C-tenellus_contig10459.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=366bp|location=Sequence derived from alignment at C-tenellus_contig10459:3030..4522+ (Choristocarpus tenellus KU2346)back to top |