mRNA_C-tenellus_contig10403.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP) HSP 1 Score: 110 bits (274), Expect = 6.520e-28 Identity = 53/74 (71.62%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTI 222 Q+VCPAAVQFLSTPLHL+GLDLYNN + AQRVSF+ REY SV AR+ RIGPAFGIGGVGNT FR R+ + Sbjct: 190 QLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRNSLRAKL 263
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: A0A2P4XPY5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPY5_9STRA) HSP 1 Score: 104 bits (260), Expect = 8.170e-28 Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTI 222 Q++CPAAVQFLSTPLHLLGLDLYNN + QRVSF+ REY SV AR+ RIGPAFGIGG GN FR R+ + Sbjct: 11 QLICPAAVQFLSTPLHLLGLDLYNNKGHTMTQRVSFVQREYVKSVLARVGRIGPAFGIGGGGNAYFRNTLRAKL 84
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 110 bits (274), Expect = 9.240e-28 Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTIA 225 QM CPAAVQFLSTPLHL+GLDLYNNPK+ R +F+ +Y +SV ARI RIGPAFGIGGVGNTAFRK R+ A Sbjct: 204 QMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARFA 278
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.460e-27 Identity = 54/75 (72.00%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTIA 225 Q+VCPAAVQF+STPLHLLGLDLYNN A+R SF+ REY SV ARI RIGPAFGIGGVGNT FR R+T A Sbjct: 188 QLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTFA 262
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM) HSP 1 Score: 106 bits (265), Expect = 1.370e-26 Identity = 53/71 (74.65%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFR 213 Q+VCPAAVQ LSTPLHLLGLDLYNN + A+RVSF+ REY SV ARI RIGPAFGIGGVGNT FR R Sbjct: 188 QLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFRNTLR 258
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: W2KIJ3_PHYPR (Uncharacterized protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=W2KIJ3_PHYPR) HSP 1 Score: 106 bits (264), Expect = 1.930e-26 Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTI 222 Q+VCPAAVQF+STPLHLLGLDLYNN + +QRV FI REY SV ARI RIGPAFGIGGVGN FR R+ + Sbjct: 188 QLVCPAAVQFVSTPLHLLGLDLYNNKGHAMSQRVGFIRREYVKSVLARIGRIGPAFGIGGVGNAYFRNTLRAKL 261
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: A0A484DVU1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVU1_BRELC) HSP 1 Score: 105 bits (261), Expect = 5.070e-26 Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTI 222 Q++CPAAVQF+STPLHLLGLDLYNN + +RV+FI REY SV AR+ RIGPAFGIGGVGN FR R+T+ Sbjct: 185 QLLCPAAVQFVSTPLHLLGLDLYNNKGHAIGRRVNFIQREYVKSVLARVGRIGPAFGIGGVGNNYFRNTLRATL 258
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: A0A3M6VQY3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY3_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.040e-25 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTI 222 Q++CPAAVQF+STPLHLLGLDLYNN + Q S + REY SV AR+ RIGPAFG+GGVGN FR FR+ + Sbjct: 189 QLICPAAVQFISTPLHLLGLDLYNNKGHTMTQHASLVRREYVKSVLARVGRIGPAFGVGGVGNAYFRNIFRAKL 262
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: A0A0P1AEL6_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEL6_PLAHL) HSP 1 Score: 102 bits (254), Expect = 5.910e-25 Identity = 49/74 (66.22%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTI 222 Q++CPAAVQF+STPLHLLGLDLYNN + QR+ FI REY SV ARI RIGPAFGIGGVGN+ R R+ + Sbjct: 188 QLICPAAVQFVSTPLHLLGLDLYNNKGHAVTQRIGFIQREYVKSVLARIGRIGPAFGIGGVGNSYVRNTLRAGL 261
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Match: H6S466_PLAVT (Uncharacterized protein (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S466_PLAVT) HSP 1 Score: 99.8 bits (247), Expect = 3.670e-24 Identity = 49/74 (66.22%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 1 QMVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARIGPAFGIGGVGNTAFRKYFRSTI 222 Q++CPAAVQF+STPLHLLGLDLYNN AQRV+ I RE+ S+ ARI RIGPAFGIGGVGN FR ++ I Sbjct: 160 QVLCPAAVQFVSTPLHLLGLDLYNNKNQSVAQRVALIQREFGKSLLARIGRIGPAFGIGGVGNAYFRHTLQAGI 233 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10403.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10403.1.1 >prot_C-tenellus_contig10403.1.1 ID=prot_C-tenellus_contig10403.1.1|Name=mRNA_C-tenellus_contig10403.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=77bp MVCPAAVQFLSTPLHLLGLDLYNNPKNLPAQRVSFITREYAASVTARIARback to top mRNA from alignment at C-tenellus_contig10403:2924..3157- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10403.1.1 ID=mRNA_C-tenellus_contig10403.1.1|Name=mRNA_C-tenellus_contig10403.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=234bp|location=Sequence derived from alignment at C-tenellus_contig10403:2924..3157- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10403:2924..3157- >mRNA_C-tenellus_contig10403.1.1 ID=mRNA_C-tenellus_contig10403.1.1|Name=mRNA_C-tenellus_contig10403.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=231bp|location=Sequence derived from alignment at C-tenellus_contig10403:2924..3157- (Choristocarpus tenellus KU2346)back to top |