mRNA_C-tenellus_contig10197.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: D7G823_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G823_ECTSI) HSP 1 Score: 254 bits (649), Expect = 4.890e-71 Identity = 154/288 (53.47%), Postives = 187/288 (64.93%), Query Frame = 1 Query: 1 TCHRAEFPFSYRRSPSANGIAHLTATGFVGEGTVVVRQGDAAAPQPPQTPVAXXXXXXDADSRCHLHEGAQGVPQPLYA-CVFEHMYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 861 T RAEFPFSYR +A L + G+ V D A XXXXXX AD C LH+G + + Y CVFEH+ RNALFRRLRLPHRFQALV LLGLKNLSPHY P++TDV+A ++LKR + G G XXXX XXXX EA A+R GR T+VT +KRLLP+ANGQ SQQSRWGA A FRF LPE + P +L YG A+ LV+G G G QGPPR +R+ VWRK +++ LGEV+VPL +LDDR ++EWV LRG+KG++W Sbjct: 201 TVARAEFPFSYRHQ-----LAELASH----RGSRVAPAADTAVTSAXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAGGNGNDXXXXXXXXXX--XXXXXEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPLVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSW 477
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A6H5K928_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K928_9PHAE) HSP 1 Score: 249 bits (637), Expect = 7.760e-65 Identity = 143/288 (49.65%), Postives = 177/288 (61.46%), Query Frame = 1 Query: 1 TCHRAEFPFSYRRSPSANGIAHLTATGFVGEGTVVVRQGDAAAPQPPQTPVAXXXXXXDADSRCHLHEGAQGVPQPLYA-CVFEHMYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 861 T RAEFPFSYR +A L G XXXXXX AD C LH+G + + Y CVFEH+ RNALFRRLRLPHRFQALV LLGLKNLSPHY P++TDV+A ++LKR + G G + + GEA A+R GR T+VT +KRLLP+ANGQ +QQSRWGA A FRF LPE + P +L YG A+ LV+G G G QGPPR +R+ VWRK +++ LGEV+VPL +LDDR ++EWV LRG+KG++W Sbjct: 3628 TVARAEFPFSYRHQ-----LAELAF--HRGSHVAAXXXXXXXXXXXXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAGSNGNGN----YAAXXXXGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQENQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSW 3904
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A836C890_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C890_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.110e-30 Identity = 82/218 (37.61%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 208 AQGVPQPLYACVFEHMYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 861 A+G P +C+FEH+ RNAL RRLRLPHRF ALV+ +L LKNLSPH+Q DV+A L+R G H + +AVT R++P A +A +Q WG A FR+ALPE +LP I G+ + V+ AG G PP +++ V++K + S++ LG EVPL+ L+ ++EW PL+ K W Sbjct: 18 AEGT-DPYSSCLFEHLARNALLRRLRLPHRFLALVQVELHDLKNLSPHFQAQPMDVFAVARLQR--------GASAPASHKHPTLG-----------------SAVTDAHRVVPCAEAKAGRQ--WGGATIFRYALPEDALPLIDVSGALSAPAVMRRHPAGGAPG--PPSVLQLAVFKKSLLSDDCLGGTEVPLHSLNAHTTLDEWYPLKHVKHKRW 205
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A7S3Y602_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y602_HETAK) HSP 1 Score: 110 bits (276), Expect = 1.860e-23 Identity = 66/212 (31.13%), Postives = 107/212 (50.47%), Query Frame = 1 Query: 226 PLYACVFEHMYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 861 P AC H+YR+ LF RLR+PHR+ ALV+A+LL LK L+P P++ +VYA + L+R RG + ++ +T ++++ ++ S+ + WG A FRF LPE ++ G +R + +G P+ + + V+ KH + LG+VE+PL + D ++EW+PLR EKG +W Sbjct: 50 PYAACAARHLYRSLLFARLRMPHRYLALVQAELLDLKKLAPTPSPAKMEVYAVLRLQR-------RGSSVVLSNKTRTL-----------------DSVMTQPEKIVTDSS---SRSTPWGGKAAFRFPLPEA---YLRLDGPADYRQAVN---------RGAPKVLHICVYSKHFIMDSCLGDVEIPLTAITDNNHLDEWLPLRCEKGTSW 222
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A7S2UK63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UK63_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.100e-17 Identity = 77/235 (32.77%), Postives = 104/235 (44.26%), Query Frame = 1 Query: 175 DADSRCHLHEGAQGVPQPLYACVFEHMYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLR--GEKGAAW*ERL 873 DA S + G P P + +H+YRNALFRRL LP RF ALV+ +LL LKNL+ S YA + LKR QG G AR ++A T +++ S+ A + WG+ FRF LPE L + L +GPP ++V V+ K S+ +LG +V L+ L +EEWVPLR G G W R+ Sbjct: 240 DAGSDLQMRGGKATQPSPYINSIRQHLYRNALFRRLDLPQRFLALVQVELLDLKNLTAPGGSSSLTAYAMLRLKR-----QGSGAPLTLK-----------------ARTL--DSASTQPRKIGKSSGPNAP--ASWGSLVRFRFPLPEDVHCDGLSFDRDREALF-----------KGPPCELQVSVYEKKFMSDIFLGGADVKLDALASGGQLEEWVPLRAAGSDGITWFARI 437
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A7S1V6P0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V6P0_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 8.190e-15 Identity = 83/298 (27.85%), Postives = 127/298 (42.62%), Query Frame = 1 Query: 175 DADSRCHLHEGAQGVPQPLYACVFEHMYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEK-GAAW*ERLYWCLCHGGIVLPLLFRMKLESRSDTAVLWILQDEGVRKV-----VA*LHPFLHHFCAKDSPEVL 1050 DA + +G P P + +H+YRNA+FRRL LP RF +L++ +LL LKNL+ + VYA + LKR QG AR ++A T ++ +G + + WG+ FRF LPE + + Q L +GPP ++ V+ K S+ LG +V L+ L + +EEWVPLR ++ G W R+ L + LP + + SD V G+RK+ V H H + +P++L Sbjct: 1047 DAGGDLPMQQGQSIEPTPYANSIRQHLYRNAIFRRLLLPQRFISLLQVELLDLKNLNTP-TGATLSVYALLRLKR-----QGSSAPLSLK-----------------ARTL--DSAATVPVKIQKMTSGTPNAPASWGSLVRFRFPLPEDVYCDGISFDKQREALF-----------RGPPNVLQFSVYEKKFMSDIALGGADVKLDALANGGQLEEWVPLRSDRHGINWFARIRLTLRFELLCLP----HQEDHTSDNGV-GSPPSVGLRKIQQLSRVGGAHEDPKHKKSASTPDLL 1303
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: B8CG37_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG37_THAPS) HSP 1 Score: 87.8 bits (216), Expect = 8.990e-14 Identity = 70/232 (30.17%), Postives = 100/232 (43.10%), Query Frame = 1 Query: 175 DADSRCHLHEGAQGVPQPLYACVFEHMYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRL--LPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLR-GEKGAAW 861 DA + G P P + +H+Y N+LFRRL+LP RF AL++ +LL LKN++ S YA + LKR QG H + + ++A T +++ + N AS WG+ FRF LPE + S L +GPP ++V V+ K S+ LG +V L L +EEWVPLR G+ G W Sbjct: 3218 DAGGDLQMKGGFLMEPSPYENSIRQHLYGNSLFRRLKLPQRFLALIQVELLDLKNVTSPSGTSSLTAYALLRLKR-----QGSSAPLN----HKARS---------------LDSACTQARKISKISGPNAPAS----WGSLVRFRFPLPEDVNCEGKSFDSDRESLF-----------KGPPTCLQVTVYEKKFMSDVELGGADVNLESLGSGGQIEEWVPLRVGKDGITW 3410
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A7S2K745_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K745_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.140e-13 Identity = 76/269 (28.25%), Postives = 110/269 (40.89%), Query Frame = 1 Query: 205 GAQGVPQPLYACVFEHMYRNALFRRLRLPHRFQALVRADLLGLKNL-SPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSR---------WGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLR-GEKGAAW*ERLYWCLCHGGIVLPLLFRMKLESRSDTAVLWILQDEG 978 G G + ++YRN+L+RR+ LP RF A+V+ +LL LKNL SP PS T YA + LKRP GR +T R L SA+ + R W + FRF LPE +F + ++ G PP +++ V+ K ++ LG +V L+ L D +EEWVPLR G+ G W RL + L F++ + T+ +DEG Sbjct: 410 GRSGELMSYLNSIRRYLYRNSLYRRVHLPQRFMAVVKVELLDLKNLTSPGGTPSLT-AYALLRLKRP-----------------------------------GRSAPLTHKVRTLDSASTSPKKIDRSSGPNPSASWRSTIRFRFPLPEDV---------DSFGMCPNKDREALFPG--PPSVLQLTVYEKKFITDNRLGSADVKLDALADGGHMEEWVPLRAGKDGVVWFARLR---------ISLKFKLMCLAHQSTSDTDKAEDEG 622
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A392SCS1_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392SCS1_9FABA) HSP 1 Score: 74.7 bits (182), Expect = 1.460e-12 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = -1 Query: 1814 DLPRGRKPVKTKFVFKMKRTAKGTIKQFKARLVAQGFTQWEGVDYFNTFSPVMGFNVIRT 1993 DLP G KP+ +K+V+K+KR A GTI ++KARLVA+G+ Q EGVDYF +FSPV IRT Sbjct: 18 DLPEGVKPIGSKWVYKLKRKAYGTIDRYKARLVAKGYNQVEGVDYFQSFSPVAKMTTIRT 77
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A4Y1S0P9_PRUDU (Cysteine-rich RECEPTOR-like protein kinase 8 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1S0P9_PRUDU) HSP 1 Score: 75.5 bits (184), Expect = 6.320e-12 Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = -1 Query: 1817 GHQEPSSTSEALVGPA*CTRMARGNEQGDGGAMDERDIHRGEDLPRGRKPVKTKFVFKMKRTAKGTIKQFKARLVAQGFTQWEGVDYFNTFSPVMGFNVIR 2119 GH EP+S ++A++ P C M E A+ +I LP G KP+ K+V+K+K + GTI+++KARLVA+G+TQ EG+DY TFSP +R Sbjct: 44 GHIEPTSYAQAILDPHWCQAMTAELE-----ALQHNNIWSLVPLPVGHKPIVCKWVYKIKYKSDGTIERYKARLVAKGYTQIEGIDYQETFSPTAKLTTLR 139 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10197.1.1 >prot_C-tenellus_contig10197.1.1 ID=prot_C-tenellus_contig10197.1.1|Name=mRNA_C-tenellus_contig10197.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=204bp MYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPback to top mRNA from alignment at C-tenellus_contig10197:1930..5570- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10197.1.1 ID=mRNA_C-tenellus_contig10197.1.1|Name=mRNA_C-tenellus_contig10197.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3641bp|location=Sequence derived from alignment at C-tenellus_contig10197:1930..5570- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10197:1930..5570- >mRNA_C-tenellus_contig10197.1.1 ID=mRNA_C-tenellus_contig10197.1.1|Name=mRNA_C-tenellus_contig10197.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=612bp|location=Sequence derived from alignment at C-tenellus_contig10197:1930..5570- (Choristocarpus tenellus KU2346)back to top |