prot_C-tenellus_contig10197.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10197.1.1
Unique Nameprot_C-tenellus_contig10197.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length204
Homology
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: D7G823_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G823_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.780e-66
Identity = 120/201 (59.70%), Postives = 146/201 (72.64%), Query Frame = 0
Query:    3 RNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 203
            RNALFRRLRLPHRFQALV   LLGLKNLSPHY P++TDV+A ++LKR +    G  G  XXXX        XXXX EA A+R GR T+VT +KRLLP+ANGQ SQQSRWGA A FRF LPE + P +L YG  A+ LV+G  G G    QGPPR +R+ VWRK   +++ LGEV+VPL +LDDR  ++EWV LRG+KG++W
Sbjct:  279 RNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAGGNGNDXXXXXXXXXX--XXXXXEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPLVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSW 477          
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A6H5K928_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K928_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 2.070e-64
Identity = 112/201 (55.72%), Postives = 141/201 (70.15%), Query Frame = 0
Query:    3 RNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 203
            RNALFRRLRLPHRFQALV   LLGLKNLSPHY P++TDV+A ++LKR +    G  G       + +        GEA A+R GR T+VT +KRLLP+ANGQ +QQSRWGA A FRF LPE + P +L YG  A+ LV+G  G G    QGPPR +R+ VWRK   +++ LGEV+VPL +LDDR  ++EWV LRG+KG++W
Sbjct: 3708 RNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAGSNGNGN----YAAXXXXGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQENQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSW 3904          
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A836C890_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C890_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.660e-28
Identity = 75/201 (37.31%), Postives = 104/201 (51.74%), Query Frame = 0
Query:    3 RNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 203
            RNAL RRLRLPHRF ALV+ +L  LKNLSPH+Q    DV+A   L+R        G        H +                   +AVT   R++P A  +A +Q  WG A  FR+ALPE +LP I   G+ +   V+    AG   G  PP  +++ V++K + S++ LG  EVPL+ L+    ++EW PL+  K   W
Sbjct:   34 RNALLRRLRLPHRFLALVQVELHDLKNLSPHFQAQPMDVFAVARLQR--------GASAPASHKHPTLG-----------------SAVTDAHRVVPCAEAKAGRQ--WGGATIFRYALPEDALPLIDVSGALSAPAVMRRHPAGGAPG--PPSVLQLAVFKKSLLSDDCLGGTEVPLHSLNAHTTLDEWYPLKHVKHKRW 205          
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A7S3Y602_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y602_HETAK)

HSP 1 Score: 99.4 bits (246), Expect = 5.490e-22
Identity = 62/203 (30.54%), Postives = 103/203 (50.74%), Query Frame = 0
Query:    1 MYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 203
            +YR+ LF RLR+PHR+ ALV+A+LL LK L+P   P++ +VYA + L+R       RG          +                  ++ +T  ++++  ++   S+ + WG  A FRF LPE    ++   G   +R  +          +G P+ + + V+ KH   +  LG+VE+PL  + D   ++EW+PLR EKG +W
Sbjct:   59 LYRSLLFARLRMPHRYLALVQAELLDLKKLAPTPSPAKMEVYAVLRLQR-------RGSSVVLSNKTRTL-----------------DSVMTQPEKIVTDSS---SRSTPWGGKAAFRFPLPEA---YLRLDGPADYRQAVN---------RGAPKVLHICVYSKHFIMDSCLGDVEIPLTAITDNNHLDEWLPLRCEKGTSW 222          
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A7S3JT43_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT43_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.450e-12
Identity = 64/237 (27.00%), Postives = 104/237 (43.88%), Query Frame = 0
Query:    1 MYRNALFRRLRLPHRFQALVRADLLGLKNLSPHY------------------QPSRTDVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLP-----HILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWR---KHIFS-------EEWLGEVEVPLNELDDREPVEEWVPLRGE-KGAAW 203
            +YRNA++RR ++P RF AL++ +L+ L+N++                       S +D YA + LK   P     GG        V                  R++AV   +  L   +        WG +ATFRFALP+ +LP            Q F  +   E       +GPP+++ + V++     I +       E +LG+VE+PL  L D +P+++W+PLR    G++W
Sbjct: 1024 LYRNAMYRRNKMPRRFIALIQIELVALENIADSLGGTPGTPREHVAHSGGKTSHSTSDAYAVLRLKHSRPAG---GGASPPLTEKVRT----------------RDSAVAKRREHLDDRHHHGDNY--WGVSATFRFALPDEALPPEETSQDNELSKQLFTQISSTERLPT---RGPPQAVHICVYQPLSNPILASIGLAPTENYLGDVEIPLAALTDDQPLQQWLPLRASGSGSSW 1236          
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Match: A0A8J2WZR4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZR4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.500e-10
Identity = 63/225 (28.00%), Postives = 92/225 (40.89%), Query Frame = 0
Query:    1 MYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRT-------------DVYAFIALKRPEPRQQGRGGXXXXXXGHVSYAGGXXXXGEAGARRWGRETAVTGVKRLLPSANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGSGQGPPRSIRVGVWR--KHIFS-------EEWLGEVEVPLNELDDREPVEEWVPLRGEKGAAW 203
            + RNA FRR  L  RF A VR DL  L+ ++    P                D +A + L+   P+                   G         +   R++ +   +  +    G     + WGAAA FRFALP+ +LP        + RL            +GPP    V V+R  KH  +       E +LG+VEVPL+ L + +P+ +W+PL G KG  W
Sbjct: 1778 LLRNAWFRRHGLKRRFSASVRVDLEALETMAGALSPGAAEAAQAAQRAPPVDDAFAVLRLRHARPK-------------------GSQAPPPLSEKLRTRDSCIAKRRGKVHVGGG-----ATWGAAAAFRFALPDEALPP-----QNSVRLPT----------RGPPTVAYVCVYRREKHALAALGVPAQETYLGDVEVPLDNLTEDQPLTQWLPLNGGKGQHW 1963          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10197.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G823_ECTSI4.780e-6659.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K928_9PHAE2.070e-6455.72PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836C890_9STRA2.660e-2837.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y602_HETAK5.490e-2230.54Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3JT43_9STRA8.450e-1227.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2WZR4_9STRA2.500e-1028.00Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 106..202
e-value: 1.9E-5
score: 26.6
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 154..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10197contigC-tenellus_contig10197:3818..5318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10197.1.1mRNA_C-tenellus_contig10197.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10197 1930..5570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10197.1.1 ID=prot_C-tenellus_contig10197.1.1|Name=mRNA_C-tenellus_contig10197.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=204bp
MYRNALFRRLRLPHRFQALVRADLLGLKNLSPHYQPSRTDVYAFIALKRP
EPRQQGRGGGGGSHGGHVSYAGGYGGGGEAGARRWGRETAVTGVKRLLPS
ANGQASQQSRWGAAATFRFALPEGSLPHILHYGSQAFRLVLGEEGAGAGS
GQGPPRSIRVGVWRKHIFSEEWLGEVEVPLNELDDREPVEEWVPLRGEKG
AAW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf