mRNA_C-tenellus_contig10165.6.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: A0A6H5LD19_9PHAE (MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD19_9PHAE) HSP 1 Score: 114 bits (285), Expect = 7.390e-28 Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 1 MTLRSCTLNWQAFTTCCSHAMSTEKQEVMGLLLGRWEE-ENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAE 261 M+L+ CTL+WQAFTTC SHAMSTEKQEVMGLLLGRW + R+ + AVTVDHAMILTR TDKR+DRVEVG QLAEA+ IAE Sbjct: 1 MSLQRCTLSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHAMILTR-----TDKREDRVEVGYKQLAEAADIAE 83
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: D7FVU5_ECTSI (MPN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU5_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 1.090e-10 Identity = 39/60 (65.00%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 85 MGLLLGRWEE-ENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAE 261 MGLLLGRW + R+ + AVTVDHAMILTR TDKR+DRVEVG QLAEA+ IAE Sbjct: 1 MGLLLGRWHDGTGRDGTSCPAVTVDHAMILTR-----TDKREDRVEVGYKQLAEAADIAE 55
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: A0A7M5USG8_9CNID (MPN domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5USG8_9CNID) HSP 1 Score: 62.4 bits (150), Expect = 1.750e-10 Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 7 LRSCTLNWQAFTTCCSHAMSTEKQEVMGLLLGRWEEENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAE 261 L+ ++ A C SHA+STEK+E+MGLL+G E+ V+ HA I+ Y DKRKDRVE+ QL+EASS AE Sbjct: 14 LQKVKISSDALQVCMSHALSTEKEEIMGLLIGEVED---------GVSHVHATIML----YRLDKRKDRVEISPEQLSEASSKAE 85
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: UPI00077A1311 (lys-63-specific deubiquitinase BRCC36-like n=2 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1311) HSP 1 Score: 60.5 bits (145), Expect = 4.790e-10 Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 1 MTLRSCTLNWQAFTTCCSHAMSTEKQEVMGLLLGRWEEENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAEV 264 M + + + A+ C +HA+STE++EVMGLL+G E++N V +++I+ ++ DKRKDRVE+ QL++ASS AEV Sbjct: 12 MAVEAVKIEADAYMVCLTHALSTEREEVMGLLIGEVEDDN--------VAHIYSVIMLQR----LDKRKDRVEISPEQLSDASSQAEV 87
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: F0XZA9_AURAN (MPN domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZA9_AURAN) HSP 1 Score: 60.8 bits (146), Expect = 6.990e-10 Identity = 38/70 (54.29%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 52 SHAMSTEKQEVMGLLLGRWEEENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAE 261 +HA+STE+QEVMGLL GRW+ GA AV V+ M L R DKR DRVEV QLAEA+ +AE Sbjct: 19 AHALSTERQEVMGLLFGRWD------GA--AVEVESVMPLPR-----LDKRSDRVEVTGPQLAEAAQVAE 75
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: A0A3B3ZMV5_9GOBI (Lys-63-specific deubiquitinase n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B3ZMV5_9GOBI) HSP 1 Score: 62.8 bits (151), Expect = 1.160e-9 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 1 MTLRSCTLNWQAFTTCCSHAMSTEKQEVMGLLLGRWEEENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAE 261 M + +C L AF C SHA+STEK+EVMGL +G E V H++I+ R+ +DKRKDRVE+ QL+ AS+ AE Sbjct: 15 MAVSACHLESDAFLVCMSHALSTEKEEVMGLCIGELEPSR--------VVHVHSVIILRR----SDKRKDRVEISPEQLSAASTEAE 89
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: UPI00145B7F85 (lys-63-specific deubiquitinase BRCC36 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145B7F85) HSP 1 Score: 62.8 bits (151), Expect = 1.730e-9 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 1 MTLRSCTLNWQAFTTCCSHAMSTEKQEVMGLLLGRWEEENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAE 261 M + +C L AF C SHA+STEK+EVMGL +G E V H++I+ R+ +DKRKDRVE+ QL+ AS+ AE Sbjct: 132 MAVSACHLESDAFLVCMSHALSTEKEEVMGLCIGELEPSR--------VVHVHSVIILRR----SDKRKDRVEISPEQLSAASTEAE 206
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: A0A8J2S637_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S637_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.760e-9 Identity = 39/87 (44.83%), Postives = 50/87 (57.47%), Query Frame = 1 Query: 1 MTLRSCTLNWQAFTTCCSHAMSTEKQEVMGLLLGRWEEENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAE 261 M+L CTL + +HA+STEKQEVMGLL GRW+ G + + H + T D+R DRVEV QLA+A+SIAE Sbjct: 1 MSLAHCTLAKECAFCVVAHALSTEKQEVMGLLFGRWD------GPQAFIEEAHPLART-------DRRADRVEVKPEQLAKAASIAE 74
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: A0A6P9AQL4_PANGU (lys-63-specific deubiquitinase BRCC36-like n=1 Tax=Pantherophis guttatus TaxID=94885 RepID=A0A6P9AQL4_PANGU) HSP 1 Score: 58.9 bits (141), Expect = 1.790e-9 Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 1 MTLRSCTLNWQAFTTCCSHAMSTEKQEVMGLLLGRWEEENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAEV 264 M +++ L AF C +HA+STEK+EVMGL +G E+ V + +IL R +DKRKDRVE+ QL+ AS+ AE+ Sbjct: 1 MAVQAAHLEADAFLVCLNHALSTEKEEVMGLCIG-------EVDTSRIVHIHSVIILRR-----SDKRKDRVEISPEQLSAASTEAEI 76
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Match: UPI0013F2751B (lys-63-specific deubiquitinase BRCC36 n=1 Tax=Hylobates moloch TaxID=81572 RepID=UPI0013F2751B) HSP 1 Score: 61.2 bits (147), Expect = 1.800e-9 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 22 LNWQAFTTCCSHAMSTEKQEVMGLLLGRWEEENRELGARTAVTVDHAMILTRQGNYLTDKRKDRVEVGNLQLAEASSIAE 261 L AF C +HA+STEK+EVMGL +G ++ R R + H++I+ R+ +DKRKDRVE+ QL+ AS+ AE Sbjct: 14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRVDAVR--IVHIHSVIILRR----SDKRKDRVEISPEQLSAASTEAE 87 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10165.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10165.6.1 >prot_C-tenellus_contig10165.6.1 ID=prot_C-tenellus_contig10165.6.1|Name=mRNA_C-tenellus_contig10165.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=92bp MTLRSCTLNWQAFTTCCSHAMSTEKQEVMGLLLGRWEEENRELGARTAVTback to top mRNA from alignment at C-tenellus_contig10165:4080..5331+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10165.6.1 ID=mRNA_C-tenellus_contig10165.6.1|Name=mRNA_C-tenellus_contig10165.6.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1252bp|location=Sequence derived from alignment at C-tenellus_contig10165:4080..5331+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10165:4080..5331+ >mRNA_C-tenellus_contig10165.6.1 ID=mRNA_C-tenellus_contig10165.6.1|Name=mRNA_C-tenellus_contig10165.6.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=276bp|location=Sequence derived from alignment at C-tenellus_contig10165:4080..5331+ (Choristocarpus tenellus KU2346)back to top |