mRNA_C-tenellus_contig1006.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: D7FJH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH4_ECTSI) HSP 1 Score: 130 bits (327), Expect = 1.820e-35 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 +IKY PQV LN+RR ST GW +WNVILDLTGG+LSV+QLVLDC+N GDW GI GYPVKF +GFVSVFFDLIFL Q Sbjct: 179 IIKYVPQVILNIRRHSTAGWTIWNVILDLTGGLLSVVQLVLDCWNTGDWGGIAGYPVKFAIGFVSVFFDLIFLFQ 253
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A6H5L0H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H5_9PHAE) HSP 1 Score: 130 bits (327), Expect = 6.040e-35 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 +IKY PQV LN+RR ST GW +WNVILDLTGG+LSV+QLVLDC+N GDW GI GYPVKF +GFVSVFFDLIFL Q Sbjct: 239 IIKYVPQVILNIRRHSTAGWTIWNVILDLTGGLLSVVQLVLDCWNTGDWGGIAGYPVKFAIGFVSVFFDLIFLFQ 313
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A7S1CW51_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CW51_CYCTE) HSP 1 Score: 112 bits (279), Expect = 7.890e-30 Identity = 49/75 (65.33%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 LIKY PQV LN +R+ST GW++WNV+LD +GG+LS LQLVLDC ++GDW+GI G KFGLGFVS+ FD+IF+ Q Sbjct: 46 LIKYVPQVILNYQRKSTVGWSIWNVLLDFSGGLLSDLQLVLDCADMGDWTGITGNLAKFGLGFVSILFDVIFMLQ 120
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A7S4DB46_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB46_HETAK) HSP 1 Score: 116 bits (290), Expect = 1.130e-29 Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 ++KY PQ +LN RRRST GW++ NV+LD GG+LSVLQL+LDC+ GDW GI G PVKFGLGFVS+FFD+IF+ Q Sbjct: 241 VVKYIPQAYLNYRRRSTAGWSIGNVLLDALGGLLSVLQLILDCHATGDWGGITGDPVKFGLGFVSIFFDVIFMLQ 315
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A8H7SE43_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SE43_9FUNG) HSP 1 Score: 114 bits (285), Expect = 4.500e-29 Identity = 47/75 (62.67%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 ++KY PQV++N +R+ST GW+++N++LD TGG+LSV QL+LD Y GDWSG+ G PVKFGLGFVS+FFDL F+ Q Sbjct: 174 IVKYLPQVWINFKRKSTVGWSIYNILLDFTGGVLSVAQLLLDAYLSGDWSGVSGDPVKFGLGFVSIFFDLFFMTQ 248
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A397W955_9GLOM (PQ loop repeat-domain-containing protein (Fragment) n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397W955_9GLOM) HSP 1 Score: 110 bits (276), Expect = 2.550e-28 Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 LIKY PQ +LN RR+ST GW++ N++LD TGG+LS+LQL+LD Y +WSGI G PVKFGLGF+S+ FDL+F++Q Sbjct: 147 LIKYLPQAYLNFRRKSTVGWSIHNILLDFTGGVLSILQLILDAYLTNNWSGISGDPVKFGLGFLSIGFDLLFMSQ 221
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A7S1Z196_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z196_TRICV) HSP 1 Score: 113 bits (283), Expect = 2.580e-28 Identity = 47/75 (62.67%), Postives = 61/75 (81.33%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 ++KY PQV LN+RR ST GWN+WN+ILD TGG+LS++QL+ D ++GDWSGI+G P KF LGFVS+ FD+IF Q Sbjct: 293 VVKYIPQVILNIRRESTVGWNIWNIILDFTGGMLSIMQLIGDSADMGDWSGIIGNPAKFALGFVSIIFDIIFFLQ 367
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A836C9F4_9STRA (Putative lysosomal cystine transporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F4_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.960e-28 Identity = 49/75 (65.33%), Postives = 61/75 (81.33%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 L+KY PQ LN RRRST GW+++NV+LD TGG+LS+LQL+LDC N DWSGI+G PVKFGLG S+ FD++FL Q Sbjct: 199 LVKYIPQAALNARRRSTQGWSIYNVLLDFTGGLLSLLQLLLDCGNTRDWSGIVGTPVKFGLGLTSMVFDVVFLTQ 273
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A0B1TDJ1_OESDE (Cystinosin domain protein n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1TDJ1_OESDE) HSP 1 Score: 107 bits (268), Expect = 1.240e-27 Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 L KY PQ LN RR+STTGW++ NV+LD TGG L +LQ+ L C+NV DW+ G PVKFGLG VS+FFD++F+ Q Sbjct: 58 LFKYIPQALLNFRRKSTTGWSIGNVLLDFTGGCLDILQMCLQCWNVADWTAFYGNPVKFGLGLVSIFFDILFMIQ 132
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Match: A0A068RS72_9FUNG (Lysosomal cystine transporter family n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RS72_9FUNG) HSP 1 Score: 108 bits (270), Expect = 3.210e-27 Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = 1 Query: 1 LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSGILGYPVKFGLGFVSVFFDLIFLAQ 225 +IKY PQ ++N RR+ST GW++ N++LD TGG LSV QL+LD Y GDWSG+ G PVKFGLGFVS+ FDL+F+ Q Sbjct: 171 IIKYLPQAWINFRRKSTVGWSIHNILLDFTGGTLSVAQLLLDSYLSGDWSGVSGDPVKFGLGFVSIAFDLLFITQ 245 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1006.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1006.2.1 >prot_C-tenellus_contig1006.2.1 ID=prot_C-tenellus_contig1006.2.1|Name=mRNA_C-tenellus_contig1006.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=75bp LIKYFPQVFLNMRRRSTTGWNVWNVILDLTGGILSVLQLVLDCYNVGDWSback to top mRNA from alignment at C-tenellus_contig1006:263..1522+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1006.2.1 ID=mRNA_C-tenellus_contig1006.2.1|Name=mRNA_C-tenellus_contig1006.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1260bp|location=Sequence derived from alignment at C-tenellus_contig1006:263..1522+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1006:263..1522+ >mRNA_C-tenellus_contig1006.2.1 ID=mRNA_C-tenellus_contig1006.2.1|Name=mRNA_C-tenellus_contig1006.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=225bp|location=Sequence derived from alignment at C-tenellus_contig1006:263..1522+ (Choristocarpus tenellus KU2346)back to top |