mRNA_C-tenellus_contig100.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A7S2UU84_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU84_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.810e-41 Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 1 Query: 10 PAKSEGGDDAKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGGRA 282 P +GG + TITIRVRDQTGEETFFKVKK+TRMEKVF+TYA RKGV V ALRFLLDGERV+P TPK LDLEDQDQIDCMLEQQGG A Sbjct: 12 PKAPDGGGEENNTITIRVRDQTGEETFFKVKKTTRMEKVFTTYASRKGVQVNALRFLLDGERVNPAHTPKMLDLEDQDQIDCMLEQQGGAA 102
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A7S2G492_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G492_9STRA) HSP 1 Score: 136 bits (343), Expect = 9.170e-40 Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = 1 Query: 31 DDAKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGG 276 D+ ETITIRVRDQTGEETFFKVKKSTR EKVFSTYAQRKGVNVA+LRFL+DGER++P +P LD+EDQDQIDCMLEQQGG Sbjct: 34 DEKGETITIRVRDQTGEETFFKVKKSTRFEKVFSTYAQRKGVNVASLRFLIDGERINPSQSPAELDMEDQDQIDCMLEQQGG 115
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A835YTL0_9STRA (Ubiquitin-related domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL0_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.040e-39 Identity = 74/96 (77.08%), Postives = 81/96 (84.38%), Query Frame = 1 Query: 1 MSEPAKSE-GGDDAK---ETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGG 276 MSE +K + G +D K ETITIRVRDQTGEETFFKVKK+TRMEKVFSTYAQRKGV +ALRFLLDG+RV P+ TP LDLEDQD IDCMLEQQGG Sbjct: 1 MSEDSKPDVGAEDKKPAGETITIRVRDQTGEETFFKVKKTTRMEKVFSTYAQRKGVQASALRFLLDGDRVDPNQTPGELDLEDQDMIDCMLEQQGG 96
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A7S1D4N0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4N0_CYCTE) HSP 1 Score: 131 bits (329), Expect = 7.920e-38 Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 1 Query: 1 MSEPAKSEGGDDAKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQG 273 MSE AK EG E ITIRVRDQTGEETFFK+KK+T+M KVF TYAQRKGV +LRFLLDGER+ PDATPK L+L+DQDQIDCMLEQ G Sbjct: 1 MSEEAKPEGS----EPITIRVRDQTGEETFFKIKKTTKMSKVFETYAQRKGVQSTSLRFLLDGERIEPDATPKMLELDDQDQIDCMLEQTG 87
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: B7G0R2_PHATC (Small ubiquitin-like modifier n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0R2_PHATC) HSP 1 Score: 130 bits (326), Expect = 2.410e-37 Identity = 63/93 (67.74%), Postives = 79/93 (84.95%), Query Frame = 1 Query: 1 MSEPAKSEGGDDAKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGGR 279 M PA +E ++ E+IT+RVRDQTGEETFFK+KK+T+M+KVF TYA RKGV V +LRFLLDG+R++PD TPK L+LEDQDQIDC+LEQ GG+ Sbjct: 1 MDVPATTEDVKESAESITVRVRDQTGEETFFKIKKTTKMQKVFETYATRKGVQVNSLRFLLDGDRITPDQTPKMLELEDQDQIDCVLEQTGGK 93
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A7S2XQM2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQM2_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.540e-36 Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 1 Query: 37 AKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGG 276 A E ITIRVRDQTGEETFFK+KK+T+M KVF TYAQRKGV A+LRFLLDGER+ PDATP+ L+L+DQDQIDCMLEQ GG Sbjct: 38 ASEPITIRVRDQTGEETFFKIKKTTKMAKVFETYAQRKGVQSASLRFLLDGERIQPDATPRQLELDDQDQIDCMLEQTGG 117
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A448ZJ15_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJ15_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.970e-36 Identity = 62/88 (70.45%), Postives = 72/88 (81.82%), Query Frame = 1 Query: 13 AKSEGGDDAKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGG 276 A + D E ITIRVRDQTGEETFFK+KK+T+M KVF TYA RKGV +++LRFLLDGER+ PD TPK L+L+DQDQIDCMLEQ GG Sbjct: 3 ADEKAPDTGNEPITIRVRDQTGEETFFKIKKTTKMSKVFGTYANRKGVQLSSLRFLLDGERIEPDQTPKMLELDDQDQIDCMLEQSGG 90
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A7S1YCA7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YCA7_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.320e-35 Identity = 63/94 (67.02%), Postives = 77/94 (81.91%), Query Frame = 1 Query: 1 MSEPAKSEGGDDAKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGGRA 282 M++ + EG E ITIRVRDQ+GEETFFK+KK+T+M KVF TYAQRKGVN ++LRFLLDGER+ D TPK L+L+DQDQIDCMLEQ GG++ Sbjct: 37 MADDGQKEGS----EPITIRVRDQSGEETFFKIKKTTKMSKVFETYAQRKGVNSSSLRFLLDGERIEGDQTPKMLELDDQDQIDCMLEQTGGKS 126
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A067CC35_SAPPC (Ubiquitin-like domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CC35_SAPPC) HSP 1 Score: 124 bits (311), Expect = 3.770e-35 Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 1 Query: 28 GDDAKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGG 276 G+D K+TITIRV+DQ+GEETFFKVK T+MEK+FS YAQRKGV V ALRFLLDG R++ D TPK L+LEDQDQIDC LEQ GG Sbjct: 13 GEDKKQTITIRVKDQSGEETFFKVKPHTKMEKIFSAYAQRKGVPVTALRFLLDGTRIAADQTPKMLELEDQDQIDCALEQVGG 95
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Match: A0A024TXQ1_9STRA (Ubiquitin-like domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXQ1_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.890e-35 Identity = 65/93 (69.89%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 1 MSEPAKSEGGDDAK-ETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKGVNVAALRFLLDGERVSPDATPKALDLEDQDQIDCMLEQQGG 276 MS+ ++GG+D K +TITIRV+DQ+GEETFFKVK T+MEK+FS YAQRKGV V ALRFLLDG R+ D TPK L+LEDQDQIDC LEQ GG Sbjct: 1 MSDNEDNKGGEDEKKQTITIRVKDQSGEETFFKVKPHTKMEKIFSAYAQRKGVPVTALRFLLDGTRIGGDQTPKMLELEDQDQIDCALEQVGG 93 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig100.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig100.4.1 >prot_C-tenellus_contig100.4.1 ID=prot_C-tenellus_contig100.4.1|Name=mRNA_C-tenellus_contig100.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=95bp MSEPAKSEGGDDAKETITIRVRDQTGEETFFKVKKSTRMEKVFSTYAQRKback to top mRNA from alignment at C-tenellus_contig100:2406..3414+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig100.4.1 ID=mRNA_C-tenellus_contig100.4.1|Name=mRNA_C-tenellus_contig100.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1009bp|location=Sequence derived from alignment at C-tenellus_contig100:2406..3414+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig100:2406..3414+ >mRNA_C-tenellus_contig100.4.1 ID=mRNA_C-tenellus_contig100.4.1|Name=mRNA_C-tenellus_contig100.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=285bp|location=Sequence derived from alignment at C-tenellus_contig100:2406..3414+ (Choristocarpus tenellus KU2346)back to top |