prot_C-linearis_contig99.17180.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig99.17180.1
Unique Nameprot_C-linearis_contig99.17180.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length126
Homology
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: D8LPM8_ECTSI (Similar to C18orf24 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM8_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.300e-65
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 0
Query:    4 LELVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            +ELVTVGEL+GVPRSTR RLTIEQVNAAV +IQ+A ERRHAF+SKPRKKMSEKQR RLEELL QEVPAHGG PFI+EPDLRALP+FKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV
Sbjct:    7 VELVTVGELDGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 125          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A6H5KVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT8_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 3.770e-62
Identity = 106/119 (89.08%), Postives = 112/119 (94.12%), Query Frame = 0
Query:    4 LELVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            +ELVTVGEL GVPRSTR RLTIEQVNAAV +IQ+A ERRHAF+SKPRKKMSEKQR RLEELL QEVPAHGG PFI+EPDLRALP+FKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV
Sbjct:  245 VELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 363          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A835YPY4_9STRA (C18orf24 protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY4_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.510e-24
Identity = 50/123 (40.65%), Postives = 82/123 (66.67%), Query Frame = 0
Query:    1 MPVLELVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFK-KGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            MP ++LVT  EL+ +P++TR RL ++ VNAA+ E+Q     ++  +++P+ K++EK R R E+    E P H G  F++E ++R+  A   KGE TA+ ++ +LR+LKR + +R  G+MTYVV
Sbjct:    1 MPCIQLVTSAELQALPKTTRGRLQLDHVNAAITELQAVLTTKYTLLARPKSKLNEKLRRRYEQYAAAEAPEHEGAHFLTESEMRSCAALGGKGEATARLMLNSLRSLKRFRPLRANGVMTYVV 123          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A7K6LCH4_9CORV (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Falcunculus frontatus TaxID=254539 RepID=A0A7K6LCH4_9CORV)

HSP 1 Score: 70.5 bits (171), Expect = 7.110e-13
Identity = 39/117 (33.33%), Postives = 70/117 (59.83%), Query Frame = 0
Query:    6 LVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            L+T+ E E VP   + RLT +Q+NA V E+ +A   ++  + +P K MS   RN  ++ ++QE  A  G  FI E D++A    K  +    ++++ LR+ +R++ +RG+G++ YV+
Sbjct:   31 LITMEEFESVPAYMKGRLTYDQINAVVQEMNKAVAAKYKIMYQPLKNMSIPDRNLYDKFMEQETNATRGLFFIVEADIKAFTQLK-ADKRFHSILSILRHCQRVREIRGSGLVRYVI 146          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A852JT92_SPIPA (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Spizella passerina TaxID=40210 RepID=A0A852JT92_SPIPA)

HSP 1 Score: 70.5 bits (171), Expect = 4.450e-12
Identity = 39/116 (33.62%), Postives = 68/116 (58.62%), Query Frame = 0
Query:    7 VTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            +TV E E VP   + R+T +Q+NA V EI +A E ++  + +P K MS   RN     +++E     G  FI E D++A    K  +    ++++ LR+L+R++ +RG+G++ YV+
Sbjct:  140 ITVEEFEKVPAYLKGRITYDQINAVVQEINKAVEGKYKILYQPLKSMSAPVRNLYHRFIEEETKDTKGSFFIVEEDIKAFTQLKL-DKRFHSIVSILRHLQRVREIRGSGLIRYVI 254          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A7L0L6I0_9SYLV (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Sylvietta virens TaxID=208069 RepID=A0A7L0L6I0_9SYLV)

HSP 1 Score: 66.6 bits (161), Expect = 2.180e-11
Identity = 37/117 (31.62%), Postives = 67/117 (57.26%), Query Frame = 0
Query:    6 LVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            L+T  E E VPR  + R+T +Q+NA V ++ +A   ++  + +P K MS   RN     +++E     G  FI E D++     K  +    ++++ LR+L+R++ VRG+G++ YV+
Sbjct:   31 LITTEEYESVPRYLKGRITYDQINAVVQQMNKAVVDKYKIVYQPLKSMSASVRNLYRRFVEEETKNTKGVFFIVEADIKEFTELKM-DKRFHSILSILRHLRRVREVRGSGLIRYVI 146          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A7K6CG84_PTIVI (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Ptilonorhynchus violaceus TaxID=28724 RepID=A0A7K6CG84_PTIVI)

HSP 1 Score: 67.8 bits (164), Expect = 4.270e-11
Identity = 38/117 (32.48%), Postives = 65/117 (55.56%), Query Frame = 0
Query:    6 LVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            L+T  E E VP   + RLT +Q+NA V EI +A   ++  + +P K MS   RN     ++ E     GE FI E D++     K  +    ++++ LR+ +R++ VRG+G++ Y++
Sbjct:  135 LITTEEFESVPAYMKGRLTYDQINAVVQEINKAVVSKYKILHQPLKSMSVPVRNLYHRFMEDETKGTEGEFFIVEADMKEFTQMKM-DKRFHSILSILRHCQRVREVRGSGLVRYII 250          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A7K7WXV1_9PASS (Spindle and kinetochore-associated protein 1 (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K7WXV1_9PASS)

HSP 1 Score: 65.9 bits (159), Expect = 4.330e-11
Identity = 37/117 (31.62%), Postives = 67/117 (57.26%), Query Frame = 0
Query:    6 LVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            L+T  E E VP   + RLT +Q+NA V E+ +A   ++  + +P K MS   RN  +  +++E     G+ FI E D++     K  +    ++++ LR+ +R++ VRG+G++ YV+
Sbjct:   31 LITTEEFESVPAYMKGRLTYDQINAVVQEMNKAMVAKYKILYQPLKSMSVPVRNLYDRFMEEETKDTRGQFFIVEADIKEFTQLKL-DKRFHSILSILRHCQRVREVRGSGLVRYVI 146          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A7L2VD82_9AVES (Spindle and kinetochore-associated protein 1 (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L2VD82_9AVES)

HSP 1 Score: 65.5 bits (158), Expect = 5.960e-11
Identity = 40/117 (34.19%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    6 LVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            L+T  E E VP   + RL+ EQ+NA V E+ +A   ++  + +P K MS   RN     L++E     GE FI E D+R     K  +    +++  LR+ +RL+ VRG+ ++ YV+
Sbjct:   30 LITAEEFENVPAYMKGRLSYEQINAVVQELNKAVVGKYKILHQPLKSMSAPVRNLYHRFLEEETKDTKGEFFIVEADIREFTQLKV-DKRFHSILNILRHCQRLREVRGSRLVRYVI 145          
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Match: A0A7L4DWQ0_9AVES (Spindle and kinetochore-associated protein 1 (Fragment) n=65 Tax=Aves TaxID=8782 RepID=A0A7L4DWQ0_9AVES)

HSP 1 Score: 67.0 bits (162), Expect = 8.250e-11
Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    6 LVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPRKKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 122
            L+T  E E VP   + RLT EQ+NA V E+ +A   ++  + +P K MS   RN     L++E     GE FI E D+R     K  +    +++  LR+ +RL+ VRG+ ++ YV+
Sbjct:  135 LITAEEFESVPAYMKGRLTYEQINAVVQELNKAVVGKYKILHQPLKSMSAPVRNLYHRFLEEETKDTKGEFFIVEADIREFTQLKV-DKRFHSILNILRHCQRLREVRGSRLVRYVI 250          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM8_ECTSI1.300e-6589.08Similar to C18orf24 protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5KVT8_9PHAE3.770e-6289.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPY4_9STRA1.510e-2440.65C18orf24 protein-like protein n=1 Tax=Tribonema mi... [more]
A0A7K6LCH4_9CORV7.110e-1333.33Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A852JT92_SPIPA4.450e-1233.62Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7L0L6I0_9SYLV2.180e-1131.62Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7K6CG84_PTIVI4.270e-1132.48Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7K7WXV1_9PASS4.330e-1131.62Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7L2VD82_9AVES5.960e-1134.19Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7L4DWQ0_9AVES8.250e-1135.04Spindle and kinetochore-associated protein 1 (Frag... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042031SKA1 microtubule binding domainGENE3D1.10.10.1890coord: 1..123
e-value: 2.2E-27
score: 97.4
IPR009829Spindle and kinetochore-associated protein 1PFAMPF07160SKA1coord: 4..115
e-value: 1.1E-20
score: 74.5
IPR009829Spindle and kinetochore-associated protein 1PANTHERPTHR28573FAMILY NOT NAMEDcoord: 3..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig99contigC-linearis_contig99:387008..388434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig99.17180.1mRNA_C-linearis_contig99.17180.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig99 386659..388443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig99.17180.1 ID=prot_C-linearis_contig99.17180.1|Name=mRNA_C-linearis_contig99.17180.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=126bp
MPVLELVTVGELEGVPRSTRARLTIEQVNAAVAEIQRAGERRHAFISKPR
KKMSEKQRNRLEELLQQEVPAHGGEPFISEPDLRALPAFKKGEMTAKALI
ATLRNLKRLKGVRGAGMMTYVVQGG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042031SKA1-MBD
IPR009829SKA1