prot_C-linearis_contig99.17171.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig99.17171.1
Unique Nameprot_C-linearis_contig99.17171.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length658
Homology
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BLAST of mRNA_C-linearis_contig99.17171.1 vs. uniprot
Match: D7G7U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U6_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 3.110e-160
Identity = 344/640 (53.75%), Postives = 408/640 (63.75%), Query Frame = 0 
Query:   22 QDETSDELSSFDVLGGLPSFPATTAHDTFDHDHDASLLHP-ARSSQPP--YLYAPRAAEGIASGTGRSTESGLELDQALERANCDSDEELEAIRGSVRSLRAQRAAVEKLKEKARAEEGTAKALKRKLGEAERRIQELRAQGGRDVVRRLMDEVTELRARLQATSAALQTRENSVAELREAVHHLRLDLRAGQEKTKTQARKLEEQGRESQEQRVTIRRLEEECSRCEERAQVAEKTAEDKCAASGRELASLSALLREANATLDASKGTMQTTLAKQAKKLQAVRKDKESLLTQKGQAKERLQELTSLCERQRSQXXXXXXXXXXVERLASAAKDDTRLAEDQAARLRAELSAADRGRREEDAGATIKLRTATRQAEELTVELARVKLEAEDKARQLLRHRDEMSSFRQDVNKLREATAQQGDIRQALRDRDGTVRGLRQRLELERRERGQWGQARKQLLIEFCEEENKLRSTLQPAQQQRRXXXXXXXXXXXXXXXXXXXXXXXXXQPVFDQGPPARSERDPVEKNETLSRQSTMYSLHSYATSNGEAGDDGAEGLAFRNRSNSRVARRQEEKGGRGSGDGSLFDLARTTRAVVGNGTFDA-VGTVGTDRFGVRDVGGHEAEARDEFGMRPGQQLSQQA 657
            ++  S +  SFDVLG LP+ P TT         + SL+    R+ +P   + YA    EGIASGTG STESGLE  Q  ER + DSD+ELEAIRGSVRSLRAQRAAVEKLKEKAR                       RAQGGRDVVRRLMDEVTELRARL+ATS A QTRENSVA+LREAV  L LDLRAGQEK + Q+RKLE+Q                                   CAASGRELASLSALLREANATLDASKG+MQ T+AKQA+KL+A RK+KESLL +KGQ +ER++ELTS+CERQRS+          +ERLASAAK +TRLA++QAA+L+ ELSAAD+ RREEDAGATIKLRTA RQ EEL  E+  VK EA +KARQL+RHRDEMS+FR+DV+KLREA  QQGD+RQA+RDRD T+R LR++LELERRERGQWGQARKQLL+EFCEEENKLRSTLQPAQ Q                           Q + +  PP  S+R  + +++ LSR +T+ ++ +   S   + +    G A        VAR +E+  G       L DLA       G G  D   GT+G    G  +       A DEF MRPGQQLSQQA
Sbjct:    2 ENTNSSQDLSFDVLGVLPTVPTTTPL-------EPSLIGSHTRTGRPQSHHSYA-LGGEGIASGTGGSTESGLE--QGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKARLXXXXXXXXXXXXXXXXXXXXXXRAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVADLREAVQTLTLDLRAGQEKARAQSRKLEQQ-----------------------------------CAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARKEKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSAADKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQHQE----------------PRSTRRQGRKQAILEHAPPTGSDRR-LTRHKPLSRHATIRNIRTNGDSRRSSANSSLRGEAC-------VAREEEKVFGDSEAGEVLLDLA-------GGGVRDGGTGTLG----GYEEGNSSRTMASDEFEMRPGQQLSQQA 561
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7U6_ECTSI3.110e-16053.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availableCOILSCoilCoilcoord: 292..368
NoneNo IPR availableCOILSCoilCoilcoord: 387..435
NoneNo IPR availableCOILSCoilCoilcoord: 115..159
NoneNo IPR availableCOILSCoilCoilcoord: 211..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig99contigC-linearis_contig99:337885..342956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig99.17171.1mRNA_C-linearis_contig99.17171.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig99 337885..342956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig99.17171.1 ID=prot_C-linearis_contig99.17171.1|Name=mRNA_C-linearis_contig99.17171.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=658bp
MISSLRCIAPSGSWAMGHERRQDETSDELSSFDVLGGLPSFPATTAHDTF
DHDHDASLLHPARSSQPPYLYAPRAAEGIASGTGRSTESGLELDQALERA
NCDSDEELEAIRGSVRSLRAQRAAVEKLKEKARAEEGTAKALKRKLGEAE
RRIQELRAQGGRDVVRRLMDEVTELRARLQATSAALQTRENSVAELREAV
HHLRLDLRAGQEKTKTQARKLEEQGRESQEQRVTIRRLEEECSRCEERAQ
VAEKTAEDKCAASGRELASLSALLREANATLDASKGTMQTTLAKQAKKLQ
AVRKDKESLLTQKGQAKERLQELTSLCERQRSQLAEAKLRLREVERLASA
AKDDTRLAEDQAARLRAELSAADRGRREEDAGATIKLRTATRQAEELTVE
LARVKLEAEDKARQLLRHRDEMSSFRQDVNKLREATAQQGDIRQALRDRD
GTVRGLRQRLELERRERGQWGQARKQLLIEFCEEENKLRSTLQPAQQQRR
QPQQQQQRKIRPRRQQQHEHEQEQEQPVFDQGPPARSERDPVEKNETLSR
QSTMYSLHSYATSNGEAGDDGAEGLAFRNRSNSRVARRQEEKGGRGSGDG
SLFDLARTTRAVVGNGTFDAVGTVGTDRFGVRDVGGHEAEARDEFGMRPG
QQLSQQA*
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