prot_C-linearis_contig98.17131.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig98.17131.1
Unique Nameprot_C-linearis_contig98.17131.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1185
Homology
BLAST of mRNA_C-linearis_contig98.17131.1 vs. uniprot
Match: A0A6H5KRP0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP0_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 3.780e-36
Identity = 199/501 (39.72%), Postives = 224/501 (44.71%), Query Frame = 0
Query:  746 AGPSYSEVFEWDNERDALELKEIMIVERARERRKRLAKERARGQAVIQYLTKLQREERGRSNLLRAKGRILGDVARMLPERSAETSDLRHKISQTLSSSSGD----------------------TTKG-------------RXXXXXXXXXXXXXXXXXXXXXXXXXXADSMDVEGERNDERQGRKAL------------------------------------------------------------PPPIVSSVPGEAAA-DSEPDVHSRTVQSMLRCWNAVGERLAAARKVVTEVGM-------PVTNRAAVAAAATAAGGRQDGERRVKPKKIT--KGPRGMRTGAGGTGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPHQGP--GQAR--FRKRKLARILGXXXXXXXXXXXXXGRKAEXXXSGKRPESGGRAWAGAAAA--------ADVVPVERLKWPSTIVLRTPYDVPLLLSCLSTYPDKLAAALYPS 1129
            +GPSY E+ EWD +RDALELKEIMI ER RERR+ L +E+A+GQAV+QYL KL+REERGRSNLLRAKG +L D+ARMLPER  E  +LR+KI +      G                       + KG              XXXXXXXXXXXXXXXXXXXXXXXXXX       G       G  A                                                              P       GE     S PDVH+ T QSMLRCWNAVGERLAAARKVV EV                        G  +DG    +PK +   KGPRG     GG    XXXXX                         P +G   GQ R   RKRK++R LG                  XXX                          ADVVP+ERL WPST++ RTPY VPLLLSCLSTYPDKLAAALYPS
Sbjct:  574 SGPSYGELMEWDAQRDALELKEIMIAERTRERRRGLMREQAKGQAVVQYLAKLEREERGRSNLLRAKGLMLADLARMLPERVKEVIELRNKIDKISQGLGGSXXXXXXXXXXXXXXXXXXXXECSVKGIAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAGASTPGSSACLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFAATPSCGDDTSGEGLLLCSNPDVHALTAQSMLRCWNAVGERLAAARKVVREVNAGXXXXXXXXXXXXXXXXXXXXXGRAEDG----RPKGVGGGKGPRGGIRPTGGGXXXXXXXXKGGEAVDMDMDSDVSSCDESNNDNSPSRGAAHGQQRNATRKRKVSRELGPSNAASPFSNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVVPMERLDWPSTVIPRTPYGVPLLLSCLSTYPDKLAAALYPS 1070          
BLAST of mRNA_C-linearis_contig98.17131.1 vs. uniprot
Match: D8LJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU4_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 6.630e-36
Identity = 173/486 (35.60%), Postives = 200/486 (41.15%), Query Frame = 0
Query:  746 AGPSYSEVFEWDNERDALELKEIMIVERARERRKRLAKERARGQAVIQYLTKLQREERGRSNLLRAKGRILGDVARMLPERSAETSDLRHKI---SQTLSSSSGDTTKG------RXXXXXXXXXXXXXXXXXXXXXXXXXXADSMDVEGERN----------------------------------------------DERQGRKALPPPIVSSVP---GEAAAD---------------------------------SEPDVHSRTVQSMLRCWNAVGERLAAARKVVTEVGM-------PVTNRAAVAAAATAAGGRQDGERRVKPKKIT--KGPRG--MRTGAGGTGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPHQGPGQARFRKRKLARILGXXXXXXXXXXXXXGRKAEXXXSGKRPESGGRAWAGAAAA--------ADVVPVERLKWPSTIVLRTPYDVPLLLSCLSTYPDK 1121
            +GPSY EV EWD  RDALELKEIMI ER RERR+ L +E+A+GQAV+QYLTKL+REERGRSNLLRAKG +L DVARMLPER  E  +LR+KI   SQ L  S  +   G      +                            S   EG  N                                              D  +G ++    +V S+    GE  A                                  S PDVH+ T QSMLRCWNAV ERLAAAR VV EV                           +DG    +P+ +   KGPRG     G GG                                 G   G  +   RKRK +R+LG     XXXXXXXX     XXX                          ADVVPVERL WPST++ RTPY VPLLLSCLSTYPDK
Sbjct:  279 SGPSYGEVMEWDARRDALELKEIMIAERTRERRRGLMREQAKGQAVVQYLTKLEREERGRSNLLRAKGLMLADVARMLPERVKEMIELRNKIDKISQGLGGSGTNDNNGXXXXXXKAGTAESSVEGTAAGTGSLAGEAKNKSKASRASEGSTNATANTQRTSPSSSGFDMASAGATTPGSSACSDGKDKGKGKARRRNDDNGKGGESAKSGVVDSMAEDEGEQEASXXXXXXXXXXXXXXFAATPSCGDDASGEGLLLGSNPDVHALTAQSMLRCWNAVRERLAAARNVVREVNAGXXXXXXXXXXXXXXXXXXXXXXXAEDG----RPRGVGGGKGPRGGIRPAGGGGRARSRKGGEAVDMDVDSDVSSCDESNNDNSPPRGAAHGQQRNATRKRKASRVLGPSNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVVPVERLDWPSTVIPRTPYAVPLLLSCLSTYPDK 760          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRP0_9PHAE3.780e-3639.72Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJU4_ECTSI6.630e-3635.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig98contigC-linearis_contig98:459270..467641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig98.17131.1mRNA_C-linearis_contig98.17131.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig98 455975..467772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig98.17131.1 ID=prot_C-linearis_contig98.17131.1|Name=mRNA_C-linearis_contig98.17131.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1185bp
MSDPNNNVPIQSGPPSSHPQQAPPARPGGLIYQPSLGLGGQQQRSVGGVM
KQQAPAPDGRPSPHFPFAGLSGMGLSTLPHLAGNPNGPSAASAPSSTNLG
VTRQGPVPMLVGAVRGAPAPSRVMSAMYPGFMQQAAAAAAAPSQYALQQM
WAQSNSAASAHVAAGGTSALAPGSAVGGVPGNPPMYHAGSTVSLQAAPGA
RGGAAAAQAQASAPSAWHAAANAAAGGPIAPHPQGLLAQALAPLPAAAPA
ATPAAPAAAAAAAPVPASGGAAAEGDGGGAAVTSSPPAQDKKGDAKDEGS
KDKEKDKDKEKMQPPKPRKRTVYTLLPPGYLERHGGKTQRAEVGASASAS
NQGRPGSGDANADAAGAKASGQKKADSGDEEEEAEGDVKVEAALASDRAS
RWLLSSDEASDDITFMRIGLPKGVVVKSTKEKKEEATAAAAAAAAAAAAA
ATAAEAGTGAAAAAGAGPDAAAAAKAEEAKAVAPAAAKPVAAEDDPRLTP
KEKEWLKAAREEEELEAKNKAAGEAKAGAGAGVADAAGSASGGGGEAVVA
AAPEGVKPSGDGGGSTAATAAATAVAAPAAQAAASGIAAATAAVGTGEAA
GAGEAGVEKTAAAAAAALSAAAAATTAPAATAAASVLPGSEAAAEGAVAS
PGAAGTAAGAAAGAATEETATIASDGAASGVPATAVEKDKREVKDMEVEA
EKTNPAAAVKEEGEGSGGAAGAAMAQGGAGEADAKKKKEDGPEGPAGPSY
SEVFEWDNERDALELKEIMIVERARERRKRLAKERARGQAVIQYLTKLQR
EERGRSNLLRAKGRILGDVARMLPERSAETSDLRHKISQTLSSSSGDTTK
GRGAGGGASKGKGKARDVAAAAAAAGGGADSMDVEGERNDERQGRKALPP
PIVSSVPGEAAADSEPDVHSRTVQSMLRCWNAVGERLAAARKVVTEVGMP
VTNRAAVAAAATAAGGRQDGERRVKPKKITKGPRGMRTGAGGTGARARKG
EAMDVDDDSNVSSGGEDSDDNDNDKGPHQGPGQARFRKRKLARILGGGGG
GGGGASSKRGRKAEGGSSGKRPESGGRAWAGAAAAADVVPVERLKWPSTI
VLRTPYDVPLLLSCLSTYPDKLAAALYPSTTTASRTKEGPATATAKSAAA
GDPSKKTASPQSAEEQQQQQQQHKRGIKVAVVAR*
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