prot_C-linearis_contig97.17099.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig97.17099.1
Unique Nameprot_C-linearis_contig97.17099.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length573
Homology
BLAST of mRNA_C-linearis_contig97.17099.1 vs. uniprot
Match: D8LKZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ1_ECTSI)

HSP 1 Score: 790 bits (2039), Expect = 4.370e-282
Identity = 414/568 (72.89%), Postives = 445/568 (78.35%), Query Frame = 0
Query:   14 MLRRLGLAKAPANGT--TDG--GTDAISVVSRP--DPYVQTRFFKVVYRGRVAVRSNPAEPAPEDGQSFGHGDVLEVKGLAVAVPEGVVVELKQPQGGFVFQRHGSRTLLEEVEALKVEEGDWWYRVLHPAGARFVKIPSLQPKAPRHVSPVPQNSIVHACRRHTPPGSSVSFVELSGNKGWIVESAKERAVLEKSVDGQFMVENITGEYRDDAEAWYEVVAASGVELLGAPDTTRGRMLELFLPGKSFCASERFQPPGQASTFLKVKGREAWVVQRLESDGEEACRKLPPPMDEAVEQWCRVVYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSHILLQVATPEGVVRDSSD--GDDGNVNDDTNSDDDDQGLDPLEQARRAAKRHCGWVPSTSNGLEVITETLEPWIERGLFAYQVVVDDTLSARTGPHENAPGILQHLPPYSVAAAATFLETGDGLEGFVQLAGTGSWVSSRRGQKNSMIRLPAFPHVDKTQRRFVVSAPDGVKTVVGPSHLAPPTGQLLPFGTEGSSEMVWSVEGWPGDRGAGGRKFVLLEGMG 573
            ML+RLGL KA  NG   T+G  G     VVS P  + + Q RF K                      SFG GDV+EV+GLAVAVPEGVVVELKQPQ GFVFQ+HG RTLLEEVEALKVEEGDWWYRV+HPAGARF KIPSL P+ PRH   VPQN++VHACRRHTPPGSSV+FVELS NKGWIVES KE+AVLE+S DG++MVENITG YRDD+EAWY+VV  SGVELL APD    RMLELFLPGK+FC SERFQPP Q STFLKVKGREAWVVQR ESDGEEAC+KLPPPMDEAVEQW RV YPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSH+LLQVATPEGVVRDSS   G+  +V   ++ D D    D LEQARR A+RHCGWVPSTSNG EV                  VVD+TL A TGPH NAPG  Q LPPYSVAAAATFLETGDGLEGFVQLAGTGSWV SRRGQ   M+RLPAFP VDKT RRFVVSAP GV+TVVGPS  AP TGQLLP G EGSSEMVWSV+GWPGDRG G R+FVLLEGMG
Sbjct:   34 MLQRLGLTKASVNGANGTEGANGEAKREVVSVPPVEEFEQARFLK----------------------SFGFGDVVEVRGLAVAVPEGVVVELKQPQSGFVFQKHGDRTLLEEVEALKVEEGDWWYRVVHPAGARFAKIPSLLPQTPRHTIAVPQNTVVHACRRHTPPGSSVTFVELSDNKGWIVESTKEKAVLEQSSDGKYMVENITGHYRDDSEAWYQVVDESGVELLEAPDAGSTRMLELFLPGKAFCVSERFQPPEQGSTFLKVKGREAWVVQRAESDGEEACKKLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSHMLLQVATPEGVVRDSSSEYGETVDVYGSSSDDSDWDNEDELEQARRGARRHCGWVPSTSNGEEV------------------VVDETLLANTGPHVNAPGSPQQLPPYSVAAAATFLETGDGLEGFVQLAGTGSWVLSRRGQDTKMVRLPAFPRVDKTPRRFVVSAPGGVETVVGPSPSAPRTGQLLPLGAEGSSEMVWSVKGWPGDRGVGDRRFVLLEGMG 561          
BLAST of mRNA_C-linearis_contig97.17099.1 vs. uniprot
Match: A0A7S2UXS7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS7_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.850e-7
Identity = 78/315 (24.76%), Postives = 136/315 (43.17%), Query Frame = 0
Query:   50 FFKVVYRGRVAVRSNPAEPAPEDGQSFGHGDVLEVKGLAVAVPEGVVV----ELKQP--QGGFVFQR----HGSRTLLEEVEAL------KVEEGDWWYRVLHPAGARFVKIPSLQPKAPRHVSPVPQNSIVHACRRHTP-PGSSVSFVELSGNKGWIVESAKERAVLEK----SVDGQFMVENITGEY-------------RDDAEA--WYEVVAASGV----ELLGAPDTTRGRMLELFLPGKSFCASERFQPPGQASTFLKVKGREAWVVQRLESDGEEACRKLPPPMDEAVEQWCRVVYPGGVRLRASPAF 324
            F++VV+   VAVR  P     + G    +G+V+E+      + +          + P  + G+VF+R    +   + +EEV+AL      KV++ D++YRV+H  GA+   + +      RH   +P  ++V A RR  P   S + ++    ++G+I+E+     +L+     SVD      +  GE              ++D E   +++VV   GV    E      +TR  +L+      S C      P     +F +      WV  R++       R++P  ++     + RVVY GGV +R  P F
Sbjct:   22 FYRVVHPKGVAVRETPDVEGRKTGTCLFYGEVVEISQKVKLLDDDTTYLRMDHFRDPWMRKGWVFERVRALNPETSRMEEVQALEPMKPPKVQQDDFFYRVIHQDGAQLA-VKARMDSELRHER-LPFGTVVEASRRVKPFEASDILYLRPDSHEGFILETPGGEMLLKAPPPASVDPAAEEASQRGEMLPTLERFEPQPAEQEDNEGTFFFQVVCEPGVFVRKEAKLCAQSTR-TLLKAETTFTSTCLRTLKYPGLGEVSFARCDAARGWV--RIQKHKIPIIREVPDAVENGPFNY-RVVYEGGVSVRTEPRF 330          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKZ1_ECTSI4.370e-28272.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UXS7_9STRA5.850e-724.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig97contigC-linearis_contig97:375216..382612 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig97.17099.1mRNA_C-linearis_contig97.17099.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig97 375216..382612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig97.17099.1 ID=prot_C-linearis_contig97.17099.1|Name=mRNA_C-linearis_contig97.17099.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=573bp
AVHRPNRRTRQRSMLRRLGLAKAPANGTTDGGTDAISVVSRPDPYVQTRF
FKVVYRGRVAVRSNPAEPAPEDGQSFGHGDVLEVKGLAVAVPEGVVVELK
QPQGGFVFQRHGSRTLLEEVEALKVEEGDWWYRVLHPAGARFVKIPSLQP
KAPRHVSPVPQNSIVHACRRHTPPGSSVSFVELSGNKGWIVESAKERAVL
EKSVDGQFMVENITGEYRDDAEAWYEVVAASGVELLGAPDTTRGRMLELF
LPGKSFCASERFQPPGQASTFLKVKGREAWVVQRLESDGEEACRKLPPPM
DEAVEQWCRVVYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPG
SSHILLQVATPEGVVRDSSDGDDGNVNDDTNSDDDDQGLDPLEQARRAAK
RHCGWVPSTSNGLEVITETLEPWIERGLFAYQVVVDDTLSARTGPHENAP
GILQHLPPYSVAAAATFLETGDGLEGFVQLAGTGSWVSSRRGQKNSMIRL
PAFPHVDKTQRRFVVSAPDGVKTVVGPSHLAPPTGQLLPFGTEGSSEMVW
SVEGWPGDRGAGGRKFVLLEGMG
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