prot_C-linearis_contig97.17084.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig97.17084.1
Unique Nameprot_C-linearis_contig97.17084.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length116
Homology
BLAST of mRNA_C-linearis_contig97.17084.1 vs. uniprot
Match: D7G2S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2S2_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 2.990e-64
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0
Query:    1 MKFLAFFMVCLTAVSGFVAPSAPRLSTSVRPATAAAPMRMGLKEDFQKAATTASVAVLTAAPAFATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAKDQPEGDFFAEYDERR 115
            MKFL FF+VCLTAVSGFVAP+ PRLS +VRP+TAA PMRMGLKED QK A  ASVAVLTAAPA ATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAKDQPEGDFFAEYDERR
Sbjct:    1 MKFLGFFVVCLTAVSGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAKDQPEGDFFAEYDERR 115          
BLAST of mRNA_C-linearis_contig97.17084.1 vs. uniprot
Match: A0A835Z064_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z064_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.360e-20
Identity = 52/114 (45.61%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    2 KFLAFFMVCLTAVSGFVAPSAPRLSTSVRPATAAAPMRMGLKEDFQKAATTASVAVLTAAPAFATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAKDQPEGDFFAEYDERR 115
            K L   +  + A S FVAP+AP    +     +AAP    +         T S A+L+AAPA ATEGT E LG +N  A  VPL  + +INL+F  WA+ QPEG+FF EYDERR
Sbjct:    3 KVLLAALCMVAAASAFVAPAAPTAIRATTTVMSAAPKAGAIA--------TVSAALLSAAPALATEGTSEALGIDNPLAFWVPLTVIFAINLIFFQWARTQPEGEFFGEYDERR 108          
BLAST of mRNA_C-linearis_contig97.17084.1 vs. uniprot
Match: A0A835ZAY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAY3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.370e-18
Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    8 MVCLTAVSGFVAPSAPRLSTSVRPATAAAPMRMGLKEDFQKAATTASVAVLTAAPAFATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAKDQPEGDFFAEYDERR 115
            +V     + FVAP+AP +  +   + +AAP ++G       A  TAS A+LT+AP  ATEGT E  G ++     +PL  +V INL+F  WA+ QPEG+FF EYDERR
Sbjct:   12 LVAAMGANAFVAPAAPTMRAATVMSMSAAP-KVG-------AIATASAALLTSAPVLATEGTSEAFGIDSPLGFWLPLTVIVFINLIFFQWARTQPEGEFFGEYDERR 111          
BLAST of mRNA_C-linearis_contig97.17084.1 vs. uniprot
Match: A0A7V5M5A5_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5M5A5_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 6.780e-7
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   63 AFATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAKDQPEGD-FFAEYDERR 115
            A+AT+GTGEPLG ++S+ +IV L   +++ +LF +W+  Q +GD F  EYD RR
Sbjct:   80 AWATDGTGEPLGIDDSRLLIVLLGVFITMLVLFISWSSKQDDGDDFVGEYDPRR 133          
BLAST of mRNA_C-linearis_contig97.17084.1 vs. uniprot
Match: A0A7J7IM13_9RHOD (PSII 6.1 kDa protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM13_9RHOD)

HSP 1 Score: 53.1 bits (126), Expect = 1.810e-6
Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 0
Query:   51 TTASVAVLTAAPA-FATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWA-KDQPEGDFFAEYDERR 115
            TT   + LT  PA +AT+GTGEPLG ++S+ ++V L   ++I  LF  W+ K   + DF  EYD RR
Sbjct:   65 TTVLASSLTFGPAAWATDGTGEPLGIDDSRLLVVLLGIFITILALFIGWSSKQDDQDDFVGEYDPRR 131          
BLAST of mRNA_C-linearis_contig97.17084.1 vs. uniprot
Match: L1JFS1_GUITC (Uncharacterized protein n=4 Tax=Guillardia theta TaxID=55529 RepID=L1JFS1_GUITC)

HSP 1 Score: 52.4 bits (124), Expect = 2.660e-6
Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 0
Query:    5 AFFMVCLTAVSGFVAPSAPRLSTSVRPATAAAPMR----MGLKEDFQKAATTASVAVLTAAPAFATEGTGEPLGFENSQA----VIVPLFFLVSINLLFNNWAKDQPEGDFFAEYDERR 115
            A  +  + A + F AP +  L   +R AT A  M+    + + E  +KA   A      AAPAFA EGTGE LG ++ +     ++VPLF    + LLF  +A +Q   DFF  YD+RR
Sbjct:    5 ALLLALVAAAAAFTAPHSAGLR--LRSATPAMSMKADSNIRIPEGVKKALAPAIAFAGAAAPAFA-EGTGEALGVDDGKLLIPIIVVPLF----VFLLFQGFAANQDNEDFFDTYDQRR 116          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G2S2_ECTSI2.990e-6488.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z064_9STRA2.360e-2045.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAY3_9STRA2.370e-1844.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7V5M5A5_9BACT6.780e-748.15Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
A0A7J7IM13_9RHOD1.810e-644.78PSII 6.1 kDa protein n=1 Tax=Cyanidiococcus yangmi... [more]
L1JFS1_GUITC2.660e-636.97Uncharacterized protein n=4 Tax=Guillardia theta T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.811

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig97contigC-linearis_contig97:286510..288703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig97.17084.1mRNA_C-linearis_contig97.17084.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig97 285868..288703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig97.17084.1 ID=prot_C-linearis_contig97.17084.1|Name=mRNA_C-linearis_contig97.17084.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=116bp
MKFLAFFMVCLTAVSGFVAPSAPRLSTSVRPATAAAPMRMGLKEDFQKAA
TTASVAVLTAAPAFATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAK
DQPEGDFFAEYDERR*
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