mRNA_C-linearis_contig97.17075.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig97.17075.1
Unique NamemRNA_C-linearis_contig97.17075.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 2.220e-71
Identity = 152/192 (79.17%), Postives = 158/192 (82.29%), Query Frame = 3 
Query:  315 NTPPRIGVHPPTPPPPGQ----MMAYPQQHPQQHPKXXXXXXXXX------RMGPPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS 860
            N PPR   HPP P PPGQ    +M YPQ        XXXXXXXXX      RMG PGM FQHP PXXXXXX  AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV D+FGDI+LGLYLVRGDALVLMGELD   EETPRL++VSADEIIEAQQEASAE+RQDAKLDWLFQDLS
Sbjct:   58 NPPPR--THPPNPYPPGQQQQQVMVYPQHXXXXXXXXXXXXXXXXXXXXXXRMGLPGMGFQHPLPXXXXXX--AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLFQDLS 245
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 3.050e-70
Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 3 
Query:  441 MGPPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS 860
            MG PGM FQHP PXXXXXX  AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV D+FGDI+LGLYLVRGDALVLMGELD   EETPRL++VSADEIIEAQQEASAEERQDAKLDWLFQDLS
Sbjct:    1 MGLPGMGFQHPVPXXXXXX--AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 138
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.640e-37
Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 3 
Query:  504 AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPR-----LKKVSADEIIEAQQEASAEERQDAKLDWLFQD 854
            +FFPG+ASL EQLDK VMVVLRDGRHLVG+MRSYDQFSNIVLEDTHERHFVG ++GDI LGLY+VRGD++VL+GE+ A            LK+V+ADEI++AQQE+  +     K++W F D
Sbjct:  116 SFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVD---PFKVEWDFGD 234
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: K3WSU0_GLOUD (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU0_GLOUD)

HSP 1 Score: 130 bits (327), Expect = 2.020e-32
Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 3 
Query:  507 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLF 848
            +FPGS SL EQLDK+++VVLRDGRHLVG +RS+DQFSNI+LEDT+ERH    MF DI LGL ++RGD +VL+GELD   E + P +K+ S +EI+EA++  +A+     +  W F
Sbjct:    4 YFPGSISLIEQLDKKILVVLRDGRHLVGYIRSFDQFSNIILEDTYERHVADGMFCDIELGLNIIRGDNIVLLGELDEDKERDQPHMKRASIEEILEAEERLNAKGAASVREQWDF 118
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: H3GH42_PHYRM (U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=Peronosporaceae TaxID=4777 RepID=H3GH42_PHYRM)

HSP 1 Score: 126 bits (317), Expect = 5.020e-31
Identity = 59/115 (51.30%), Postives = 87/115 (75.65%), Query Frame = 3 
Query:  510 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 851
            FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQ+SNI+LEDT ERH  G +F DI LGL ++RGD +VL+GELD+  E + P +K+V  +E++EA+++ +       +  W F+
Sbjct:    5 FPGNSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTFERHVAGGLFCDIELGLNIIRGDNIVLLGELDSEKERDQPHMKRVELEEVLEAEEQLNEAGNTSVRQQWDFE 119
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 6.330e-31
Identity = 62/98 (63.27%), Postives = 81/98 (82.65%), Query Frame = 3 
Query:  507 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRL-KKVSADEIIEAQ 797
            FF G  SL EQLDK+++VVLRDGRHLVGV+RS+DQFSN+V+E+THERH V  +FGDI LGLY+VRGD +VL+GE+D   E + +  ++VSA+EI+ AQ
Sbjct:    4 FFAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQ 101
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A6V1WH12_HETAK (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WH12_HETAK)

HSP 1 Score: 124 bits (312), Expect = 2.310e-30
Identity = 62/105 (59.05%), Postives = 82/105 (78.10%), Query Frame = 3 
Query:  513 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQD 827
            PG   L EQLDKR+++VL+DGRHL+G +RS+DQFSN+V+E+T ERH V   +GDI LGLYLVRGDA+VL+GE+D A  E   L++VSADEI+E ++E  +  R D
Sbjct:    7 PGIMGLVEQLDKRILIVLQDGRHLIGTLRSFDQFSNVVIENTFERHVVDGCYGDIPLGLYLVRGDAVVLLGEVDDAGHEGI-LRRVSADEILELEREKESRARDD 110
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A4D9CWQ3_9STRA (Sm domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWQ3_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.650e-30
Identity = 72/135 (53.33%), Postives = 96/135 (71.11%), Query Frame = 3 
Query:  447 PPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 851
            PPG  +  P P         + PG+ASL EQLD+RV+VVLRDGR+LVGV+RS+DQFSN+VLEDT+ERH V   +GD+ LGLYLVRGDA+VL+GE++A   E   L+KV+ +EI+E  Q +       AK++W F+
Sbjct:  221 PPGPHYMLP-PRPFVAVLPDYLPGAASLVEQLDRRVLVVLRDGRNLVGVLRSFDQFSNMVLEDTYERHVVDGKYGDLPLGLYLVRGDAVVLLGEVEAE-REGKSLEKVTTEEILELLQGSG---EAGAKVEWDFE 350
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A0P1A9M0_PLAHL (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9M0_PLAHL)

HSP 1 Score: 124 bits (310), Expect = 5.260e-30
Identity = 60/113 (53.10%), Postives = 86/113 (76.11%), Query Frame = 3 
Query:  510 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWL 845
            FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQFSNI+LEDT+ERH  G +F DI LGL ++RG  +VL+GELD+  E + P +K+V  +E++EA++  + E      L +L
Sbjct:    5 FPGNSSLIQQLDKQVLMVLRDGRHLVGNLRSFDQFSNIILEDTYERHVAGGLFCDIELGLNIIRGGNIVLLGELDSDKERDQPHMKRVKLEEVLEAEERLNEEGNTSLSLSFL 117
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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A7S2CG66_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG66_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.480e-30
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 3 
Query:  471 PHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQD 854
            P P           PG+ASL +QLDKR+++VLRDGRHLVG++RS+DQFSN+VLEDTHERH    +  D+ALGL++VRGD +VL+GELD   E +  L     D ++EA++ ++       K++W F++
Sbjct:    2 PPPPMEPTQMGLLLPGAASLVDQLDKRILIVLRDGRHLVGILRSFDQFSNMVLEDTHERHVANGLRSDMALGLFIVRGDNIVLLGELDPEKEASSGLIDAEPDVVLEAERNSAF-----TKVEWDFEN 124
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKJ0_9PHAE2.220e-7179.17U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=E... [more]
D8LL00_ECTSI3.050e-7090.71U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=E... [more]
A0A835ZG91_9STRA1.640e-3763.93U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=T... [more]
K3WSU0_GLOUD2.020e-3255.65U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=G... [more]
H3GH42_PHYRM5.020e-3151.30U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=... [more]
A0A7S2XVC4_9STRA6.330e-3163.27U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=F... [more]
A0A6V1WH12_HETAK2.310e-3059.05U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=H... [more]
A0A4D9CWQ3_9STRA3.650e-3053.33Sm domain-containing protein n=2 Tax=Monodopsidace... [more]
A0A0P1A9M0_PLAHL5.260e-3053.10U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=P... [more]
A0A7S2CG66_9STRA7.480e-3047.66U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=D... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig97contigC-linearis_contig97:211678..214437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score232.3
Seed ortholog evalue2.5e-58
Seed eggNOG ortholog2880.D8LL00
Preferred nameLSM1
KEGG koko:K03952,ko:K12620,ko:K14794,ko:K16931
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko03018,ko04714,ko04723,ko04913,ko04925,ko04927,ko04932,ko04934,ko04979,ko05010,ko05012,ko05016,map00190,map01100,map03018,map04714,map04723,map04913,map04925,map04927,map04932,map04934,map04979,map05010,map05012,map05016
KEGG ModuleM00146,M00397
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000290,GO:0000291,GO:0000339,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0001101,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005845,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008334,GO:0008380,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009628,GO:0009631,GO:0009651,GO:0009892,GO:0009987,GO:0010035,GO:0010467,GO:0010468,GO:0010494,GO:0010605,GO:0010629,GO:0010721,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019827,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030424,GO:0030425,GO:0032501,GO:0032502,GO:0032991,GO:0033962,GO:0034518,GO:0034622,GO:0034641,GO:0034655,GO:0035770,GO:0036002,GO:0036464,GO:0036477,GO:0042221,GO:0042538,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0051960,GO:0051961,GO:0060255,GO:0060284,GO:0065003,GO:0065007,GO:0070925,GO:0071044,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097447,GO:0097458,GO:0098727,GO:0120025,GO:0120038,GO:0120114,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1990124,GO:1990726,GO:1990904,GO:2000026
EggNOG free text desc.deadenylation-dependent decapping of nuclear-transcribed mRNA
EggNOG OGsKOG1782@1,KOG1782@2759
Ec32 ortholog descriptionSm-like protein LSm1
Ec32 orthologEc-11_006170.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03009,ko03019
Exons3
Model size1662
Cds size738
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig97.17075.1prot_C-linearis_contig97.17075.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig97 211803..213638 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930831.0788436-UTR-C-linearis_contig97:211677..2118021622930831.0788436-UTR-C-linearis_contig97:211677..211802Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 211678..211802 +
1690881272.07695-UTR-C-linearis_contig97:211677..2118021690881272.07695-UTR-C-linearis_contig97:211677..211802Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 211678..211802 +
1622930831.1472538-UTR-C-linearis_contig97:213638..2144371622930831.1472538-UTR-C-linearis_contig97:213638..214437Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 213639..214437 +
1690881272.1171384-UTR-C-linearis_contig97:213638..2144371690881272.1171384-UTR-C-linearis_contig97:213638..214437Chordaria linearis ClinC8C monoicousUTRC-linearis_contig97 213639..214437 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930831.09208-CDS-C-linearis_contig97:211802..2122341622930831.09208-CDS-C-linearis_contig97:211802..212234Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 211803..212234 +
1690881272.091032-CDS-C-linearis_contig97:211802..2122341690881272.091032-CDS-C-linearis_contig97:211802..212234Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 211803..212234 +
1622930831.1113935-CDS-C-linearis_contig97:212555..2126581622930831.1113935-CDS-C-linearis_contig97:212555..212658Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 212556..212658 +
1690881272.0995724-CDS-C-linearis_contig97:212555..2126581690881272.0995724-CDS-C-linearis_contig97:212555..212658Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 212556..212658 +
1622930831.1288826-CDS-C-linearis_contig97:213435..2136381622930831.1288826-CDS-C-linearis_contig97:213435..213638Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 213436..213638 +
1690881272.1079519-CDS-C-linearis_contig97:213435..2136381690881272.1079519-CDS-C-linearis_contig97:213435..213638Chordaria linearis ClinC8C monoicousCDSC-linearis_contig97 213436..213638 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig97.17075.1

>prot_C-linearis_contig97.17075.1 ID=prot_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bp
MADTPKERASRAQKAQAQQPKARAAPRTQGPASGGPRPARGTSDGGAGAG
AGAGASAVAAHSHNTPPRIGVHPPTPPPPGQMMAYPQQHPQQHPKHPQHP
QYPQRMGPPGMTFQHPHPPPPPPPPPAFFPGSASLFEQLDKRVMVVLRDG
RHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMG
ELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS*
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mRNA from alignment at C-linearis_contig97:211678..214437+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig97.17075.1 ID=mRNA_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2760bp|location=Sequence derived from alignment at C-linearis_contig97:211678..214437+ (Chordaria linearis ClinC8C monoicous)
AGAAGGAGCAAGCAGTCTGTGTGTGCCCCAAAACGGGGTGAAAAGAAGCA
CAAGGCAAGGCAAGGCAACGGGACGGTAGGGCGAAAGGAAAGGCTCACAA
GTAGGCACCCACCCGTCAGCACAAAATGGCGGACACTCCGAAAGAAAGAG
CCAGCAGGGCTCAAAAGGCGCAAGCACAACAACCAAAGGCACGAGCAGCG
CCACGGACACAGGGGCCGGCATCCGGGGGGCCGAGACCTGCGAGGGGCAC
GTCAGACGGCGGGGCAGGGGCAGGGGCAGGGGCAGGGGCATCGGCGGTGG
CTGCGCATAGCCATAACACTCCTCCCCGAATAGGAGTACATCCACCTACG
CCTCCGCCCCCCGGCCAGATGATGGCGTACCCGCAGCAGCACCCGCAGCA
GCATCCGAAGCATCCACAGCACCCGCAATACCCGCAGCGGATGGGTCCGC
CGGGGATGACCTTTCAGCACCCTCACCCTCCGCCGCCTCCGCCACCACCC
CCGGCGTTTTTTCCTGGGTCTGCGAGCCTGTTCGAGCAGCTCGACAAAAG
GGTCATGGTGGGTGACTTTAGACTTTTGCGGGGAGCAGGGGGTAGGTTGT
GAAAGGGGGACTTTGGAGCACTTTGGAGGGGTAGGTGGGTGCTAATCGCT
CTTTTGGGTCGTAGTTCAGGGTGAAGTCGGAAAACGCGAGAAGTCGCAGA
CTACTAGGACCTGGAGGGAAATGAGCGATGGCAAATAGTATGATGTCACA
CGTGTGGCGTGGCTGGGGCGTGGGCAGTATCTCGTGGGTGTCAGGTCGCC
CGAGCTTGTAGACGGAGCAAGACCTATGTTCGCTGGTCCCTACAACCGGT
AACGAAACAACGCAACATAACGTACCAGGTTGTGCTTCGCGACGGGAGGC
ACCTGGTGGGAGTGATGAGAAGCTACGACCAGTTCTCCAACATCGTCCTG
GAGGACACGCACGAGCGGCACTTTGTTGGGGGTGAGCTCAGGCTCGGGTT
GATCGTTCCTATCTCGTTTGTGTTGGCGTTGTGGGTACACTGCTGTGTAG
GCTGGCTAAGACAAAGCCTATCATGTTTGGAACGGCTACTCGTGTGTGTG
TATGACGGGATGATGGGTGATGGGACGAATCGGCGATACGCTTAACGAAA
ACGTTTGGCTCGCAAGGTGAAATATGCTACAGCAGTATTATGGTACTGGT
ACAGCACTTGCTGGTAGGCAAACTCAAGACGCACTCGCGATACTAATATA
GAAGTATGTTGATCGAAATTCTCGTCCCGCAGGTGTAAGACTATGGCAGT
TGCACCACTCGCCCTGTTTGTTGCAGTGTGGGGTAGATAGCGAGGGCGTT
CCGAGAGCACGGTGTGAGGCCCCTTCCCCATTCCCACAGTATAGAGAGCC
GCTTGAAGATCGATGTCAAATGCATCACCTCCGGGGACTGAGTTGCCCGC
CCGGCGCCTTATAGAACACCGATGGCAAACTTTTCAATCAAATTTTACGA
CACTTGTGCCGGAGTTTGCAATGTCGGGTGTTCGAATCCTCCACCCCTCA
GAACCAGACAAGTAGCAATGGCATTAGAGGAGATTGCTAGGACGAGGTGT
ATGCCCGCTGTGCAGCAGGGATGTCGCGCTTGCCTAAGGAGCACCTGCAC
GATTGATGATTGATATGTCGCACGTGTGTGCTTCTTCTTTCGTCTCCAAT
TTTTCATCTTTACCTCTAACTTATTCTGGTTTTGTCAACCTGGTGCGGTG
TGCTCCAGATATGTTCGGGGATATTGCGCTGGGGCTTTACCTGGTGCGAG
GGGACGCCCTCGTGCTCATGGGGGAACTGGACGCGGCCTTAGAGGAGACG
CCCAGGCTGAAGAAGGTCTCTGCCGACGAGATCATCGAGGCGCAGCAGGA
GGCCTCCGCGGAGGAGCGGCAGGACGCAAAGCTAGACTGGTTGTTCCAGG
ACTTGTCATGATCGTGGTACATTTTTGGTTCCATCATGCGACGTAGTATT
TCTTCGTTTGGTTTTGCTTCGCGGGGCAGACCGGTAGATCTTTTGCTCAC
GGCCTAACTTTTTTGGGAAGCTCGGGGGATCTGCAGGAGTTTTTGGGGTG
TTCGGTAGTTTGATTGATGATTGATTCGTTTCTCGATATTTAACGGCTGA
TGCGTCTTTTCCTACATGTATGTCCTTCCAGCTCTGTGGCTGGTTTTCGC
TCAGGTCTTGTGACGGTTGCTCAGAAACTTGTCAACCCTTGAAGTCACAT
GCTAAAAATGTCTTATCGTTGGAAATATGCGTGGTTGGCCTCAATAATTG
GTATCTACTTGTAGGGCCGCCCAACGTTTTACGTTTTGCAGCTCGAGGAG
CTACTGCTGTACCCGCTGCTGTACCTACCGGTGAACGGTTAAGGCACCTC
TCCAGGCAATGTAGGAAGCGGTCGTGACAGGCGACAAGACGTAGGGGCAG
CAAACGGTTCGCTTGTCGAGCATATGTGAGGGCGCGTGAAGCGCAAAAGC
TGCGTTTTGATCGGGGTCGTTTGCTTGATTCAGGCTGGCGCGTTGGTTGG
TTCCCCCGTGGAAAGTCGAGATCGAAGGGCCATGTGCTGTTTGGTGTAGT
TGTGTTTTTTAACCGGGGCATTCATTCGTTGAATCAAACTTAGCCGTCTA
CTTATTAAAGGGCTACATGAAGAGTTCGGCGCGGCGATGATATGTAAACC
GCCAAAACAAAAGTCTGCCTTTCCGCCGGGCAAGGCGGACATAAATATGC
CAGAGTGCGA
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Coding sequence (CDS) from alignment at C-linearis_contig97:211678..214437+

>mRNA_C-linearis_contig97.17075.1 ID=mRNA_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at C-linearis_contig97:211678..214437+ (Chordaria linearis ClinC8C monoicous)
ATGGCGGACACTCCGAAAGAAAGAGCCAGCAGGGCTCAAAAGGCGCAAGC
ACAACAACCAAAGGCACGAGCAGCGCCACGGACACAGGGGCCGGCATCCG
GGGGGCCGAGACCTGCGAGGGGCACGTCAGACGGCGGGGCAGGGGCAGGG
GCAGGGGCAGGGGCATCGGCGGTGGCTGCGCATAGCCATAACACTCCTCC
CCGAATAGGAGTACATCCACCTACGCCTCCGCCCCCCGGCCAGATGATGG
CGTACCCGCAGCAGCACCCGCAGCAGCATCCGAAGCATCCACAGCACCCG
CAATACCCGCAGCGGATGGGTCCGCCGGGGATGACCTTTCAGCACCCTCA
CCCTCCGCCGCCTCCGCCACCACCCCCGGCGTTTTTTCCTGGGTCTGCGA
GCCTGTTCGAGCAGCTCGACAAAAGGGTCATGATGGCGGACACTCCGAAA
GAAAGAGCCAGCAGGGCTCAAAAGGCGCAAGCACAACAACCAAAGGCACG
AGCAGCGCCACGGACACAGGGGCCGGCATCCGGGGGGCCGAGACCTGCGA
GGGGCACGTCAGACGGCGGGGCAGGGGCAGGGGCAGGGGCAGGGGCATCG
GCGGTGGCTGCGCATAGCCATAACACTCCTCCCCGAATAGGAGTACATCC
ACCTACGCCTCCGCCCCCCGGCCAGATGATGGCGTACCCGCAGCAGCACC
CGCAGCAGCATCCGAAGCATCCACAGCACCCGCAATACCCGCAGCGGATG
GGTCCGCCGGGGATGACCTTTCAGCACCCTCACCCTCCGCCGCCTCCGCC
ACCACCCCCGGCGTTTTTTCCTGGGTCTGCGAGCCTGTTCGAGCAGCTCG
ACAAAAGGGTCATGGTTGTGCTTCGCGACGGGAGGCACCTGGTGGGAGTG
ATGAGAAGCTACGACCAGTTCTCCAACATCGTCCTGGAGGACACGCACGA
GCGGCACTTTGTTGGGGGTTGTGCTTCGCGACGGGAGGCACCTGGTGGGA
GTGATGAGAAGCTACGACCAGTTCTCCAACATCGTCCTGGAGGACACGCA
CGAGCGGCACTTTGTTGGGGATATGTTCGGGGATATTGCGCTGGGGCTTT
ACCTGGTGCGAGGGGACGCCCTCGTGCTCATGGGGGAACTGGACGCGGCC
TTAGAGGAGACGCCCAGGCTGAAGAAGGTCTCTGCCGACGAGATCATCGA
GGCGCAGCAGGAGGCCTCCGCGGAGGAGCGGCAGGACGCAAAGCTAGACT
GGTTGTTCCAGGACTTGTCATGAATATGTTCGGGGATATTGCGCTGGGGC
TTTACCTGGTGCGAGGGGACGCCCTCGTGCTCATGGGGGAACTGGACGCG
GCCTTAGAGGAGACGCCCAGGCTGAAGAAGGTCTCTGCCGACGAGATCAT
CGAGGCGCAGCAGGAGGCCTCCGCGGAGGAGCGGCAGGACGCAAAGCTAG
ACTGGTTGTTCCAGGACTTGTCATGA
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